Xiphophorus couchianus (Monterrey platyfish): 114148294
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Entry
114148294 CDS
T05908
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114148294 (arhgef16)
Membrane trafficking [BR:
xco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114148294 (arhgef16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_1
PH
SH3_2
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
114148294
NCBI-ProteinID:
XP_027879271
LinkDB
All DBs
Position
1:complement(10267759..10280328)
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AA seq
715 aa
AA seq
DB search
MSHSESDNCTDSKSPKIETLFSTELHIYEPGDEGYQPRSLRTLQSETATPQEDEVDNLVV
PEQVILRTETPAAQKPETQKLILSTESPAAKKLGTHQLIPKSLAVSSRPKNRHHTTVVTF
PVGRENSNSENHSRHSAQGPEVSWDDYDSDGDGSAFRRNRRNKSYRAAVTSLDIDAMTSE
TAPKTTLKPVDENRESSPGPSLSNRRKRSLGRKRNQRGSFKDATPCLYQEIRERGLDSTQ
QDELLEDFVVVEPPAEDHGIVMKSYKQAHLTWSQLPQVQESGILSTITPQERKRQEAIFE
IITSEHSYLHSLGILVRHFKNSAALKKTMTTTEHHHLFSNISVILTASQRFFTDLEQRHN
EQLVIRDISDIVKNHAAHHFAPYIVYCSNETFQQRTLQKLLNNNSTFKDTLKEIERNSEC
GGLPMFSFLILPMQRVTRLPLLLDTICQKTQDQTAEYFAAVWALKAMSKLVTECNDGARR
MERTEQMYTIQKQMEFGKIKPFPLVSASRWLKKRGELAVSSEELSLWRAFTNRSYYLFLF
NDVLIVTKKKSEESFVVLDYATLDNVQVEFGEDADVRTSPSKSNSNYLSFKLQMSKNSEG
KLEQISLVADSRVDRARWITALKEQKQEGVFTCTDGLPQYEVTKTHMPKEPDELGLRQAE
VVIVLQKEEEWCYGERMRDGERGWFPANCATEITDPTAMESNVQRMKRLRKETNV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagtgagtcagacaactgcacggacagtaagtcccctaaaatagagaccctc
ttctccacagaacttcatatatacgagccaggagatgaaggctaccaaccgagaagcctg
cgaacactccagtctgaaacagccaccccacaggaagacgaggtggacaacctggtggta
ccggagcaggtcattctgagaacagagactcctgcagcacagaagcctgagacccaaaag
ttgattctgagcacagagagccctgcagcaaagaagctaggtacccaccagctgattccc
aagagcttagcggtgtcaagccgacccaagaatcgtcaccacaccaccgtggtgaccttc
ccagtgggacgggagaattcaaacagcgaaaaccacagccgtcactcagcgcaggggcca
gaggtttcctgggacgactatgacagcgatggagacgggtctgccttcaggaggaaccgc
aggaacaagtcatatcgggcggcggtgaccagcctggacattgatgccatgacatccgag
acagcacctaaaaccactctgaaacccgttgatgaaaaccgagaaagcagtcctggtcct
tctctcagcaatagacgcaagcgatccctgggcagaaagaggaaccagcgtggatcattc
aaagatgcgacaccatgcctgtaccaggagatcagagagcgcggcctggactccacccag
caggacgagctgctggaggactttgttgtggtggagcctccagcggaggaccacggcatc
gtgatgaagagctataagcaagctcacctcacctggagccagttacctcaggtgcaagaa
tctggtattctgtcaacaatcacacctcaggagagaaagaggcaagaggccatttttgaa
attatcacctcagagcactcatacctgcacagccttggcatcctggtacgtcacttcaag
aacagcgcagcgttgaagaaaacgatgacgacgacggagcaccaccacctcttctccaac
atatccgtcatcctcacagccagccaacgcttctttacggatcttgaacaacgtcacaat
gagcagctggtaatccgggacatcagcgacattgttaagaaccacgcagcacaccacttc
gctccttacatcgtctactgctccaacgagacctttcagcagaggacgctccagaagctg
ctgaataataactctacgttcaaagacaccctgaaagaaattgagagaaatagtgaatgt
ggaggccttcccatgttctcgtttctcatcctgcccatgcagcgtgtgaccagactacca
cttctgcttgatacaatctgtcagaaaactcaggaccagacggcggagtactttgctgcc
gtttgggcgctgaaggccatgagcaagttggtcactgaatgcaacgacggagcaaggcgg
atggagaggacggagcagatgtacaccatccaaaaacagatggagtttggaaaaataaag
ccatttcccctggtgtcagcatcgcgatggttgaagaagcgcggcgagctggccgtctcc
agcgaagagctcagcttgtggagggctttcaccaacaggagctactacctgttcctcttc
aacgacgtgctgatcgtcaccaaaaagaagtctgaggagagcttcgtggtgttggactac
gccactctggataacgtccaggttgagtttggggaagacgccgatgtacggacgtcgccc
agcaaaagcaactccaactacctttcctttaaactgcagatgagcaagaacagcgagggg
aaattagagcagatctctctggtggctgactccagggtggaccgggcacgatggatcact
gctcttaaagagcagaagcaagaaggggtcttcacttgcacagatggtttgccgcagtat
gaagtcaccaaaacgcacatgcctaaagaaccagacgaactcggcctgcgacaggcggag
gtcgtcattgttctccaaaaggaagaagagtggtgctatggggagaggatgcgggacgga
gagagaggctggtttcctgccaactgcgccacggagatcacagatcccaccgccatggag
agcaacgtgcaacgaatgaagcgtttgcgtaaggagaccaacgtctga
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