Xiphophorus couchianus (Monterrey platyfish): 114148312
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Entry
114148312 CDS
T05908
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114148312 (ybx1)
03019 Messenger RNA biogenesis [BR:
xco03019
]
114148312 (ybx1)
03041 Spliceosome [BR:
xco03041
]
114148312 (ybx1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
114148312 (ybx1)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
114148312 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
114148312 (ybx1)
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
General mRNP proteins
114148312 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
114148312
NCBI-ProteinID:
XP_027879315
UniProt:
A0A3B5L4Q5
LinkDB
All DBs
Position
1:10262777..10267760
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AA seq
324 aa
AA seq
DB search
MSSEAETQQQPPQPAADVESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYA
ADRNRYRRYPRRRGPPRGGDYPENYQSDEGEPGSGGRDKSREGGENAPEGDSQQQQRRPG
YPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDEGQGGPDQGNKPVRQNYYRGFRP
RFRPRGPPRPRPVRDSEEDKENQGGEGGQNQQPRQRRYRRNYNYRRRRQQTGGKPGQENK
EAKTGGDPSAEKTSAPEAQQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaacaacctccgcagcctgctgcggatgtggagagc
ccatccagtccggcagccgcagcttcagcgggggataagaaggtcatcgcaacaaaagtc
ttgggtaccgtcaaatggttcaacgtcaggaatggatatggtttcatcaataggaatgat
acaaaggaggatgtctttgtacaccagacggccattaagaagaacaacccgaggaaatat
ctccgcagtgtgggagatggagaaactgtggaatttgacgtagttgagggagaaaaggga
gcagaggcagctaacgtcactggcccaggaggtgtcgcagtccagggaagcaagtacgct
gcagaccggaatcgctatcggcgctatccacgaaggaggggccctccccgcggcggagac
tacccagagaactaccagagcgacgaaggcgagcccggcagcggaggacgcgacaagagc
agagaggggggagagaacgcccccgaaggagactcgcagcaacagcagcgcagaccaggt
taccctggcagacggcgctacccgccatactttgtacgtagacgctacggccgtcggccc
ccgtacaccaacgcaccacgcggagagatgactgagggaggtgagggtgacgaaggccag
ggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttccgacca
aggttcagaccaaggggtcccccccgtcccagaccagtgcgggacagcgaggaagacaag
gagaatcagggcggcgaaggaggccagaatcaacagccccgccagcggcgctaccgtcgt
aactacaactaccgccgcagacgccaacagaccggtggcaaacccggccaggaaaacaaa
gaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccagcag
ggtggggctgagtag
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integrated database retrieval system
