Xiphophorus couchianus (Monterrey platyfish): 114148320
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Entry
114148320 CDS
T05908
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114148320 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114148320 (xrcc5)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
114148320 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
114148320
NCBI-ProteinID:
XP_027879326
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Position
7:complement(18851213..18865451)
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AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFAQAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLDQDGQYQNITVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVSMDLLQTET
KGKKCDRLNIVLLTDLNTEASSDKLDVIIENLKQAGITLQFFLPFPVEDEEEGEGDEDRT
GSGDPGRGKGLSREQRSGLEMVKNIMLSLDEEEGLEEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNQRDDVKRETVFCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKKNLVLRHQFMGTQIVKIFP
ARDDEHAGVAMSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPDYECLLYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLSAIDSLIDSMMLVTEDEDLLKPHHLPNPAFQRH
FQCLHHRAVHADSPLPPMEPWLEAALDRPEVIQERCQAPLQEIKKLFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKEDEEEDEYNLANIAEGSVTSVGSVDPARDFRALIKQKTLSFG
EVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRSIPSRG
LEVFWDLLVQDAVTLISKDKVEGSAVSKSEASQFLLAEEKKEQVAPEPVEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcaaagtcagccctggttctctgcatggatgtgggcttctccatgtccaac
tcagcccctggtgaagagcctccatttgcacaggcgaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgaactggctttggttctgtttggcacggat
tccaccaaaaactctttggaccaggatgggcaataccagaacattacagtgcatcgtcat
cttatggtgccagactttgagctgctggaggagattgaacatcagatccaccctgagaat
cagcaggctgactggctggatgctcttgtagtttccatggatcttctccagacagaaacc
aaggggaagaagtgtgatcgcttaaacattgttctcctgactgacctgaacacggaagcc
agttcagacaagctggatgttattattgagaacttgaaacaagctggaatcaccctgcag
ttctttttgcctttcccagtggaggatgaagaagagggtgaaggagatgaggaccgaacg
ggttccggtgaccctggtaggggcaaaggtctctccagggaacagcgaagtggcctggaa
atggttaaaaacatcatgctgagtctggacgaggaggagggcctggaagaaatttacaca
ttcaggaatgctgtggagcagctgtgtatgtttaaacgcattgagaggagacccatggcc
tggccctgtcagctcaccatcggtagctctctgtccatccgtattgttggctacaaagca
gtgactgaggagaaactgaagaaaatgtggatcacagtcgatgctcaaaccaaccagaga
gatgatgtgaagagagagactgttttctgtctggacgatgacaatgagacagaggtgcag
aaggaagacattattcagggttttcgttacggaagtgatattgtgcctttctccaaagtg
gatcaggatcagatgaaatacaagcatgatgggaagtgctttgctgtcctgggcttcact
aaaaagaacttggttcttcgccatcagttcatgggaacacaaattgtcaagatatttcct
gcacgggatgatgagcatgcaggcgtggccatgtcggctctgatccgtggtctggatgag
ctcaacatggttgccatcgttcgttatgcctacgaccggcgcagcaatcctcaagtgggc
gctgcattcccgtgtatcaagcctgattatgagtgcctcttatatgttcagctgcccttc
atggaagatctttatggaagacagtttacatttccttctcttgagaacaacaagaagatt
gctccatcagagacgcagctgtcagccatcgactctcttatcgattcgatgatgcttgta
acagaagacgaagatttgctcaaacctcaccatcttcccaaccctgctttccagagacac
ttccagtgtctgcaccacagggctgtacacgctgactctcctcttccccccatggagccg
tggctggaggctgctctcgatcgccctgaggtcatccaggaacgctgccaagctccactg
caggagataaagaagttgtttccactcaccgaagtagagaagaaaaagaagctgaagaca
agcgctcagatttttggcaaagactctgaggaaccagatgccaaaaaagcaaaagaagac
gaagaggaggatgagtataacctggcaaacattgctgaaggatctgttacttctgtggga
agtgtagatccagcccgggacttccgcgctctgatcaaacagaaaactctttcgttcgga
gaagtctgtcagcaattgactcacaggatagagcagctgcttagcaacaagaacacgcac
tactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgtaaagcagggg
aatgctgatctgttcaacagttaccttcagtccctgaaaaggagtattcccagcagaggc
ctcgaggtcttctgggacctgcttgttcaagacgctgtgactttgatcagcaaggacaag
gttgaaggaagcgccgtgtcgaaaagtgaagcctctcagtttcttttggctgaggaaaag
aaagaacaagttgctcctgaacctgtggaagacactggcgatgttgatgacttgctggac
atgatgtaa
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