Xiphophorus couchianus (Monterrey platyfish): 114148323
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Entry
114148323 CDS
T05908
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114148323
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Contactins
114148323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
C2-set_2
V-set_CD47
Ig_5
Pur_ac_phosph_N
Tissue_fac
C2-set
Ig_4
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
114148323
NCBI-ProteinID:
XP_027879328
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All DBs
Position
7:23603532..23831288
Genome browser
AA seq
1029 aa
AA seq
DB search
MMLLWKLLLLQSLMGCLAESGVLQSPAFTKQPGSIVYPVETVGTNREVVFSCEAQGSPPP
TYRWKLNGTEVTPKAGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPTFVKQDNRRFVSQET
GNLYIAKMEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSVGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPAPSISWRRVDGVPFPRKVDMRKASGVLEIPYFQQEDAGTYECM
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKFIDDSLVWECKATGKPKPSYRWMKNGENL
ESTEERVQVANGILSISRLTLSDAGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLKS
QTLVKVGGDILIECKPKMSPWGVISWRKDSEPLQGSSRVSILDNGNLRIWNVTKLDAGLY
TCVARNQFGVASSTGSVTVKEPTIITTQPTTLDITVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGSNGGFFEKVGGQHSAGDIMIRNIQLGHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIQVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGH
QLTAAVTELSPWVEYEFRVLASNRVGTGEPSKPSKQARTKSTTPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPSPEASRYVFKNESIQPFSPFHV
KVGVYNNEGESPFGPVTTIYSAEEEPGRAPTRIRAKSLSASEMEVSWKALPWNASKRRVL
GYELRYWSRSEREETASVQRTSGNQTSSVIGGLRGSTAYHISVRAYNTAGTGPPSTTVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEHVKALENESEVTGYKVLYKKNRHSRPSVMETN
TTSVELALPTDEDYIIQIKPFGDGGDGSSSKQITIPKIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaactgctgctgctgcagtcacttatggggtgcctggcagagagc
ggcgtcctgcagagtcccgcattcaccaagcagccaggcagcatcgtgtaccctgtggag
acggtggggaccaacagggaggtggtgttcagctgcgaggcccagggaagcccacctccc
acgtaccggtggaagttaaacggtacagaagtcactcccaaagctggatctcactacagc
ctttctggaggcaacctccgaatcagccatctgaacaaagaccaagacgccggaacgtac
cagtgcctcgcctccaactccttcgggaccatcgtcagccgagaggccagcctaaccttt
gcttacttggagaacttcaagactcacagaagaagttctgtctcagtacgggaaggtcaa
ggagtggttctgctgtgcggacctccccctcattctggagatctgatcttctcctggatc
ttcaatgaatacccaacgtttgtgaagcaggacaaccggcgcttcgtctcacaggagacg
gggaacctgtacatcgccaaaatggagccttcggatgttggaaactacacctgtgtggtg
accaacacagtcacaaagacccgtgtccagggcccgcccactccgctggtgcttcgcagc
gtcggtgttatgggcgaatacgagccaaagattgaagttcagtttccagaagttgttcac
gttgccaaaggatccactgtaaagctggaatgcttcgctcttggaaaccctgcaccctcc
atcagctggaggagagtggacggcgtaccgttccccaggaaggtggacatgaggaaggcc
agcggcgtcctggaaatcccgtacttccaacaggaggacgccggcacatacgagtgcatg
gccgagaactcccgggggatgaacacggtgaaaggaaagctctctttctacgctccacct
catctcatcgagaagccccaagacgtccaaaagttcatcgatgactcgctggtgtgggag
tgcaaagccacagggaaaccgaaaccctcgtacagatggatgaagaacggagaaaacctg
gaatctacagaggagcgcgtacaggttgccaatgggattctgtcaatcagtcggctaacc
ctgtccgacgccggaatgtaccagtgtgtggctgggaataagcacggcgaggtctactcc
aacgcagagctccgagtcatagctgttgccccggatttttctcacaatcaactgaagagt
cagacgctggtgaaagtgggaggagacatcctcatcgagtgcaagcccaagatgtctcct
tggggcgtgatctcatggcggaaggacagtgaacccctgcaggggagcagcagggtctcc
attctggacaatggcaaccttcggatatggaacgtgaccaaactggacgctggcctctac
acctgcgttgcaagaaaccagtttggagtggcgagcagcacaggaagtgttacagtaaaa
gagccgaccatcatcaccacgcagcccacaacgctggacatcaccgtcggggagagcgtg
gtcctgccctgtcaggtgagccacgacccgtctctggagctcaagttcacctggttcttc
aatgagcaactcatccactttgggagcaacggcggattcttcgaaaaagttggaggccag
cactcggcgggggacattatgattcggaacatccagctggggcacgcagggaagtacaca
tgcgccgtgcagaccaaggtggacagcatctccatagcggtggacctggttgtccgaggt
cccccaggcccccccaccagcatccaagtagaagaaatcacagataccacggcctctctg
tcctggaggcccggtcccgataatcacagtccaattacagcgtacaccatccaggccagg
acaccgttctccctggggtggcaggctgtcaccacagttcctgaggtggttgggggccat
cagctgaccgctgccgtaacagagctgagcccctgggtggagtacgagttccgagttctg
gcgagcaacagagtcgggaccggcgagcccagcaagccgtccaaacaagcaaggacaaag
agcacaactccgaaggtcacaccggctaatgtgagcggaggaggaggcagtcgctccgaa
ttagtcatcacatgggagcctgttccagaggagctgcagaatgggccggggttcggctac
gtggtggcgttccgacctcacggggccacgggctggatgcaggccgccgtgccgtcccca
gaggcgtcccgatacgtctttaaaaacgagagcatccagcctttctcgcctttccatgta
aaggtcggcgtttacaacaacgagggggagagtccgtttggaccggttaccaccatctac
tctgctgaggaagagcctggcagagctcccaccaggatccgcgccaagagcctctctgcg
tccgagatggaagtgtcgtggaaggctctgccctggaacgccagcaagcggcgagtgctg
ggctatgagctcaggtactggagtagaagcgaacgggaggagacggccagcgtgcaaaga
acctctgggaatcagacatccagcgtcatcggcggcttaagaggcagcacggcgtatcac
atctcagtgagggcctacaacacggccggaacgggccctcccagcaccaccgtcaacgtg
accaccaaaaaaccacctcccagccagcctccggttaaagtcatgtggaacacatcaaac
tccaagatcatcctgaactgggagcacgtcaaagccctggagaacgagtccgaagtgacc
ggttacaaagtgctctataagaagaatcgacacagccggcccagcgtcatggaaaccaac
accacctcggtggagctcgctcttcccaccgacgaggactatatcatccagataaagccg
tttggagacggaggggacggcagcagcagcaagcagatcaccatccccaagataccaggc
cccaacgcggtgggctcggcctccaaggtctccacgctgtcggccctcagcacaatagct
ctgtcttttacagcacgaacatctttatga
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