Xiphophorus couchianus (Monterrey platyfish): 114148328
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Entry
114148328 CDS
T05908
Symbol
snx4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114148328 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114148328 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114148328 (snx4)
Membrane trafficking [BR:
xco04131
]
SNARE
SNARE associated proteins
Others
114148328 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
114148328 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
114148328 (snx4)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
114148328 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
Motif
Other DBs
NCBI-GeneID:
114148328
NCBI-ProteinID:
XP_027879335
LinkDB
All DBs
Position
7:complement(19386051..19395309)
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AA seq
454 aa
AA seq
DB search
MRIASSADSSDNSRSQMIMADSGSSDEVAVICNTDITSTESENNIINTMVERGTALLKKM
EISVAEADKRTGKNTVNMQETYTVYLIETRPAESVSEGGTPVAPDTLWRRYSEFELLRTY
LLVTYPYIIVPPLPEKRAEFVWHKLSADNLDPDFVERRRVGLENFLLRLASHPVLSNDSI
FFLFLTEEKGWREAVLETGFQDKADSRLKSLSAMFRVKNPDKRFTALKHYSEDLSTVISQ
LLRIRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYAASIDDILEE
EEHYADQLKEYLFYTEAVRSVCRKHELIQYELEMAAQDLSYKKQQKEELETGTVRIFSLK
GMTSKLFGQETQEQRESKVAALEQSIQEGEEALKEKNAESQEFVEKAWNDIERFKEQKEK
DLREALISYAIMQISMCKKGIQVWSNAKECFNKM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgccagctcagctgacagcagcgataatagcaggagtcagatgatcatggca
gactctggaagtagcgacgaggtggctgtgatttgcaacaccgacatcacttcaacggag
tcggagaacaacataataaacacgatggtggagaggggcacggctctgctgaagaaaatg
gagataagcgtggcagaggctgataagaggacaggaaagaacacggttaacatgcaagaa
acttacactgtctacctcatagaaacacggccagctgaatcagtctcagaaggaggtaca
ccagtggcacctgacactttgtggagacgctacagtgagtttgagcttctcagaacatat
ctcctggtcacttatccctatatcatcgtccctccactgccagagaaaagggcagagttt
gtgtggcacaagctttcagcagataacctcgacccagattttgtagagcggcggagggtt
ggtctggaaaacttcttgctgcgtcttgcatcacatcctgtcctgtcaaacgatagcatt
tttttcctctttctcacagaggagaagggatggagggaagcagtcctggagacaggtttc
caagacaaggcggactccagattaaagtcattaagtgccatgttcagagtcaagaatcct
gacaagcgattcacagctctgaaacactacagtgaggatttgagcaccgtcatctctcag
ttactcaggataagagcacgagttgcagacagactctatggggtttataaagttcatggc
aactatggcagagttttcagtgagtggagtgctatagaaaaagaaatgggagatggattg
cagagtgctggccaccacatggatacgtatgctgcatcaatagatgacattcttgaagaa
gaagagcactatgcagaccaactgaaggaatacctcttctacacagaagctgtcaggtca
gtctgtagaaaacatgagttgatccagtatgagctggagatggcagcacaggacctctcc
tacaagaagcaacagaaagaagagttggagacagggactgtgcgaatcttttctttgaag
ggaatgaccagtaaattatttggccaagagactcaggagcagagggagagcaaggtggca
gccctggaacagagtatccaagagggagaggaagctctgaaggagaagaacgcagagtcc
caagagtttgtagagaaagcatggaatgacattgagcggttcaaggagcagaaggaaaaa
gacttgcgtgaagcgttgatcagctatgccatcatgcagatcagcatgtgtaaaaaggga
atacaagtgtggtccaatgccaaagagtgcttcaataaaatgtga
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