Xiphophorus couchianus (Monterrey platyfish): 114148334
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Entry
114148334 CDS
T05908
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00100
Steroid biosynthesis
xco01100
Metabolic pathways
Module
xco_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
114148334 (lss)
Enzymes [BR:
xco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
114148334 (lss)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TPR_9
TED_complement
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
114148334
NCBI-ProteinID:
XP_027879343
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Position
7:complement(36453249..36466142)
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AA seq
735 aa
AA seq
DB search
MSEGTQLRRRGGPFKTEPATDLSRWRLRNAEGRQTWSYVDDQEMPSREQTMLEAHSLGLD
ISQFVSDSSASETALDAAVKGMNFYRRLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
HEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSLRILGVDPDDPDLVRARNN
LHSKGGAVGIPSWGKFWLAVLNVYSWEGLNTLLPEMWLFPAWMPAHPSTLWCHCRQVYLP
MSYCYAVRLSAEEDPLILSLRQELFVQDFASIDWIAQRNNVAACDLYTPHSSLLSVAYMV
LNLYEAHHSVALRKMAVRELYDHIQADDRFTKCISIGPISKTINMLVRWYVDGPTSAVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDDPNLVGCLHDAHDFLR
VTQIPENPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSIRQPIS
SQRLYDAVNVLLSLRNRDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAAMQ
ALRHFLQVHPDHRAAEIRSTLRDGLEFCRRVQRTDGSWEGSWGVCFTYGTWFGLEAFACM
GHTYQAEDVPVEVQKACRFLLQQQMSDGGWGEDFESCEQRRYVQSAAAQIHNTCWALLGL
MAVRHPDQQAIERGVQLLVQKQLLNGDWPQENISGVFNKSCAISYTCYRNVFPIWTLGRF
SRLYPSSPLAGKLKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggaacgcagctgcggaggcgaggcgggccgtttaagacggagccggccaca
gacctgagccgctggaggctgagaaacgcagagggcaggcagacctggagctacgtggac
gaccaggagatgcccagcagggagcagaccatgctggaagctcattctctgggtctggac
atcagtcagtttgtgtcagactcctcggcctctgaaacggctctggatgctgcagttaaa
ggtatgaacttctacagacggctccaggctgaggacggccactgggccggggactacggt
ggacccctcttcctgctcccaggtctccttatcacatgtcatgttgctaagattcctctg
catgaggcctggaagaaggagatggtgagatacctgcgctctgttcagctgccagacgga
ggctgggggctacacattgaagataaatccacagtgtttggaacggcactgagctacacg
tctctgaggattctgggagttgatcctgatgatccagatctggttcgtgctcggaacaac
ctgcacagcaaaggcggcgccgttgggatcccatcgtgggggaagttctggttggctgtt
ctgaacgtctacagctgggagggactgaacacgttgctgccggagatgtggctcttcccc
gcctggatgccagcccacccatccaccctgtggtgccactgccgccaggtctacctgccg
atgagctactgctacgctgtcaggctgtcggcagaggaagaccctctaattctcagcctt
cgacaggagcttttcgtccaggacttcgcctccatcgactggattgctcagcggaacaac
gtggccgcctgcgacctgtacactcctcacagctcgctgctctctgtcgcctacatggtg
ctgaacctgtatgaagctcatcacagcgtcgcgctgaggaagatggccgtcagagagctg
tacgaccacatccaggccgacgaccgcttcaccaagtgcatcagcatcgggccgatctcg
aagacgatcaacatgctggttcgctggtacgtggacggccccacgtcggccgtgtttcag
gaacacgtctccaggatcccagactacctgtggctgggactggatgggatgaaaatgcag
ggaaccaacggctctcagctctgggacacgtgtttcgccgttcaggctttcctggaggct
ggagcgcaggacgaccccaacctggtcggatgtctccatgacgcccatgacttcctcagg
gtcactcagattcctgagaatccacctgaataccagaaatactacagacagatgaacaag
ggcggcttcccgttcagcacgcgggactgtggctggatcgtggccgactgcacggcggag
ggcctgaagtcggtgatgctgctgcaggagctctgtccctccatcagacagccaatcagc
tcgcagcgtttgtacgacgccgttaatgtgctgctgagcctgaggaacagagacggagga
tttgctacgtatgaaactaaacgaggaggaaaactcctggagctgctcaacccgtctgaa
gtgtttggtgacatcatgatagactacacctatgtggagtgcacgtctgcagccatgcag
gcgctgaggcatttcctccaggttcaccccgatcaccgcgccgcagagatcagatccacc
ctgagagacgggctggagttctgccggcgggttcagaggaccgacggatcctgggaggga
tcctggggagtttgctttacatatggaacctggttcggtctggaagccttcgcctgcatg
ggtcacacctaccaggccgaagacgtcccggtggaggtgcagaaagcgtgccggttcctg
ctgcagcagcagatgtctgacggaggctggggggaggactttgagtcgtgtgagcagcgg
cgctacgtccagagcgccgcggctcagatccacaacacctgctgggctttgctgggactc
atggccgtcagacatcctgaccagcaggccatcgagagaggagtccagctgctggtccag
aagcagcttctcaacggagactggcctcaggaaaacatttctggtgtgttcaacaagagc
tgcgccatcagctacacctgctacagaaacgtcttccccatctggaccctgggccgattc
tccaggctctatcccagcagcccgctggccgggaagctgaagctctga
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