KEGG   Xiphophorus couchianus (Monterrey platyfish): 114148408
Entry
114148408         CDS       T05908                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xco03032]
    114148408 (rif1)
DNA replication proteins [BR:xco03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    114148408 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 114148408
NCBI-ProteinID: XP_027879483
LinkDB
Position
7:2508345..2539720
AA seq 2349 aa
MMATAGPPNTSSFLPLLETLEDGTAGQSEQTDAYLTIANRLSGEEGRQFLPAVEKNFSRL
GKVILTHTSSSNAELSQAALQALGFCVYHSQVVSGVSEIFAAQILSALCSLVTKSIDKNT
CTRALWVISKQCFPADVVGKNVPTLLAALETVWNREDIQSAVMEHEALNVIIRLLEQVPT
PMCDGAVRWAKLVVPLVVHSASKVRLRAAAALEMGIPLLLAKQMEVAAIIEPMMSTKLIP
ELQKLFKSKNETNVLKLWPLFVKLLGKLLHKGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSSKRMKLLMQPLTSIHVRTEALLLTKVEVWWYLIVQLGPNLSS
NFDQVSVPLLQVTIGPDLPSVPNTPSRAAAQNGAVTPSTPQSGSGSFNTSASTPRMCLNS
SMHLPASFSSIQQLGLEMLLHYFLGPEVVAAAAKNKLVLSLEPLTHPLLSGAPSFMKHAA
VLISTMREAFINAGKDAPEPLLAVIWTSLVRFVSLTIESAGSKKERQGSECLTLMLQALQ
SMVSSEALPADRVLVLLEATVKGLPPRVLGSASYQVGKMDVLNGTPALFVILLLFNSSKL
PAYLEHDSRFFQCLQTLVSCGLSGPTSPLAFAEAVLGVMSSCAASLQNKELLWRMWSLLV
GPLTDTITQSNEVNQGDALEHNFSAMHSALMFPITHLLQQASQKSLLSSWSKLYRVFARC
AALVVTAEENICCEELCVKMAAAADREALRVPSTLSAVSSILQVMVECVDFSPYTPHFQQ
KLKSPHTSVNWTRKRSKALGNLSAFLSLLVQSLQAFLEAPETAPDATPLALLSIMSTLFA
NLVLANAVTEALGALVQPLALFYKCAAAGGAEFSPQLQGKLEKLLCEVLGCLQSRSTLAY
DDELLALLSPLLFVVFPHKNKHLRSAVAQFWNATFANTVRLSYPEELRPVLSQVKQKTPI
ILPGFEVVCVPDELSETYSSESSELEPKLSGIPISSAGKRDSMLSRADLKDRSATKTAKP
VPTKLDFGSPKPPRRHVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMYNNL
DASQDTTVFSQYTQSQDDSLDKVPTEQVDGIPPESPSETEEKPREDAEILSKETQDYSRP
KHDDKMEESIPDSADVFLEESTKSTERTEDMDVELKDSASPNTSASSDLVSGTPQKPSSR
RQSFITLEKYGEGKPASPSSGSSFTGPLVKTSKSQDHSSEKNILSPEASQTSTAPNSQDP
TPSETVGPQCPGSESPRRPKESRTRSEPVRLIERMQSDSAEEEDVIPDTQTKDEDKESTS
YSEEINSSSQDEESETVLDDSQSSPTQTPSGEPRRSRRHRIRPQLPGEDPDDREAKYTHV
KRRRSGEDPKSESSNLAPSRPNTRSKQAAEENSSRIQLRSKSQGNANESSQSNSQVRHRK
KIKLNNLSEDLLGSPEHKRRSTSGLDSSQTDIKSESLSGHESQKHRKRNEISKVSKEGGD
AEKPKEEFNHTVTESMVDLSQKDDPYPHTDSQTVVPLAQTEKSEEVKSEEQTEQGESQKE
KQDVVTSSPQCEDKSREQIDSDVVMFSPVEESKGESRNLLQNQEIIQDNAIETVIDNCSQ
EDSQVTPSSDSQIRRRSRRSKATESEDKDDSINSSGRLTRSQTSTPVNQPEAGVGGRTRR
RKLESSQSSTPESSRSLDSSGSGLSQGKGRLRSSQSSASSVETPESSEVLVNAVRKKKGR
KPRASLKSPLPLETKEDILEDASQNSETQNSLEESLENQDSKESGSKTESNEEESESPMI
TETPADLPLETEDSKKTESEEASQDTRSLDTTEQRDSNSEKDSLQEVEVLESSVFGDAPA
QDSCLLAEEKLQASETSKETAEKVSETEGVTEKQEESNSDQQDFPAPPPEEPSPEELQQS
QMECAQVTEEEEPSATHQVLEGSAKEDITLQDNEDGQPETSKDKLEKAPATETSGAADLD
CTTAASSQAAAQDSPVKQKDLEAVTEPDVGQSPSNGLLKGTWSPSASPSNSILKKCQKRQ
LEVETTSPLVKSRRVSFANPIQQQETADDIDRRSPALRTSSPRRSKGCNIPQQKHITTPT
KGMLVLSPRNIHSPSYRSSKKCLISEMTWEPRAVPRDCIYPSLVGCSAPVEAVLSQISST
MWSRGFGQLIRARNVKSVGDLCALTPSEIKTLPIRSPKISNVKKALKIYEQQRKGRADEL
KSFDETERMTSEVEEAASPRNHDDEKTSAETLATELLDEPLPADAAAEHQDGEQRPTVPA
DPAAELPAAVEALACRATPLELSRCSPQQLLQMHEQLGGMMRGVAVELQARLCHASDKHR
VAPRSGQTH
NT seq 7050 nt   +upstreamnt  +downstreamnt
atgatggctactgcagggcctcccaacacctccagctttctccctctgttggagactctg
gaggacggtacggccggacagtcggagcagacggacgcctacctgaccatcgccaatcgc
ctcagtggggaggaaggccgccagttcctcccagcagtagagaagaacttctcacgtttg
ggtaaagtcatactgacccacacaagcagttccaatgccgagctgagtcaggctgccctc
caggctttagggttctgtgtgtatcactcccaggttgtttccggagtctccgagatcttt
gcagctcagatactgtcggctctctgctccctggtgacaaagtccatcgacaagaacacc
tgcaccagagccttatgggtcatctccaagcagtgctttcctgcagatgtagtcggcaaa
aacgtgccgactctgttggctgctttggagactgtgtggaacagagaggacatccagtct
gcagtgatggagcatgaggccctgaacgtgatcatcaggctgctggagcaggtgccgacc
ccgatgtgtgacggcgcggtgcgctgggcgaagctggtcgtccccctggtggtgcactcc
gcctccaaggtgcgtctgcgcgccgctgccgccttggagatgggcattcctctgctgctg
gccaaacagatggaggtggctgccatcatcgaaccaatgatgtccacaaaactgatccca
gagctgcagaagctcttcaagtccaagaatgaaacgaacgtcctgaagctctggccattg
tttgtgaagcttcttgggaagctgctgcataaaggcggtccgttcatcaactccctgctg
catctggaggagctgggcttccgaagctcctcccccaccatcaagaagatcgccttcatc
gcctggaagagcctcatcgataactttgctctcaacccagacatcctgtgcagctccaag
cgcatgaagctgctgatgcagccgctcacctccatccacgtccggacagaggcgctgctg
ctcaccaaggtggaggtgtggtggtacctcattgtgcagctgggacccaatctgtcctcc
aacttcgatcaggtgtccgtgcctctgctccaggtgaccattggacccgacctgccgtcc
gttccaaacactccatctcgggctgctgctcagaacggagccgtgactcccagcacccca
caatcaggcagcggcagcttcaacacgtcggccagcacgccccggatgtgcctgaactcc
agcatgcatcttcctgccagcttctcctccattcagcagctgggcctggagatgctgctg
cactacttcctggggccagaggtcgtcgctgccgcagcaaagaacaaactcgtgttgagt
ctagaacctctgacccacccgctgctctctggtgctccgtccttcatgaagcatgcggcc
gtgctcatctccaccatgagggaggccttcataaacgccggcaaagacgctccagagccg
ctgctggccgtcatctggaccagcctggtccggtttgtcagcttgaccatagagtcagca
ggcagtaagaaggagcggcaaggcagtgagtgtctcaccctgatgctgcaggcgctgcag
agcatggtctcctccgaggctctccctgcagacagagtcctggttctgttggaggccaca
gtgaagggtctgcctccaagagtgctgggctccgcctcctaccaagtggggaagatggac
gttctgaatggaaccccagctctgttcgtcatcctcttgctcttcaacagcagcaaactg
ccggcctacctggagcacgacagcagattcttccagtgcctgcagactctggtgtcgtgc
ggcctgtctggacccacgtctcctctggccttcgccgaggccgtgctgggcgtcatgagc
agctgtgcagcgtctctgcagaacaaggagctgctctggaggatgtggagtttactagtc
ggccctctgactgacaccatcacacagtctaatgaggtgaaccaaggtgacgctctggag
cataacttcagcgccatgcactctgccctgatgttccccatcactcacctcctccagcag
gcgtcccagaagtccctgctgtcctcctggtccaagctgtaccgcgtgttcgctcgctgc
gccgccctggtggtgacggctgaggagaacatctgctgcgaggagctctgtgtgaagatg
gctgccgctgcagacagggaggcgctgagggtcccttccacactgagcgccgtctccagc
atcctgcaggtcatggtggagtgtgtggacttctctccctacacgcctcactttcagcag
aagctgaagtctcctcacacttcggtgaactggacgcggaagcggagcaaagccctgggg
aacctgtctgccttcctgtccctgctggtccagagtctgcaggcgttcctggaggccccc
gagacggcccccgacgccacgcccttggccctgctctccatcatgtccactctctttgcc
aacctcgtcctggccaacgctgtcaccgaggcgctgggtgcgctcgtccagcctctggct
ctcttctataagtgcgctgcggccggcggcgctgaattctcccctcagctccagggaaag
ctggagaagcttctgtgtgaggtcctgggctgcctgcagtcccgctccactctggcctat
gatgacgaactgctggctctgctgtctcctctgctgtttgtcgtgtttccgcacaagaac
aagcatctgcgctcagccgttgctcagttctggaacgccacctttgccaacacagtcaga
ctctcatatccagaggagctcaggccggtgctgagccaagtgaagcagaagactccgatc
attcttccaggctttgaggttgtctgcgttcctgatgagctcagtgagacctattcaagt
gaaagctccgagcttgagccaaagctcagtgggatccccatttcttctgctgggaagaga
gactccatgctcagcagagctgatctgaaggaccgcagcgccacaaagacggccaagccg
gttccgacaaagttggactttggttctcccaaacctccacgcaggcacgtcctggaggaa
gaggcttccatcgactttgtctttattcctcctgagacaaaggagagggttctaactgaa
caccagaaagaggtgaaaagaaccaaaagggttgatattccggccatgtacaacaacctg
gacgcttctcaggacacgaccgttttcagccagtacacccagagccaagacgactctctg
gataaagttccaactgaacaggtcgatggcatcccaccagaatctcccagtgagacagaa
gagaaacccagagaagatgctgaaattctttctaaagaaactcaagactactcccgtcct
aaacatgatgacaaaatggaggagagcatcccagattcggcagatgtttttctggaggag
tctactaaaagcactgagaggactgaagacatggacgttgagttaaaagacagtgcgagt
ccaaacacgtctgcttcttctgatttggtgtcggggactcctcaaaaacccagcagtcgg
cgccagtcatttattaccttggaaaagtatggcgagggaaagccggccagtcccagcagt
ggatcgtcttttacaggtcctcttgtaaagacgtccaaaagtcaagatcactctagcgag
aagaacatattgtcccctgaggcctcacagacatccacagcaccaaactctcaggatccc
actccttcagaaacggttggtccacagtgtcctggaagcgagtctcctcggaggcctaaa
gagtcgaggacaagaagtgagccggtaagattgattgagagaatgcaaagtgactcggca
gaggaggaagatgttatccctgacacgcagacaaaagacgaggacaaagaaagcactagt
tactcagaagaaatcaactcttccagtcaggatgaggaatctgaaacggtgttggatgat
tcccagtcatctccgacccagacaccttcaggtgaaccaagacgatccagacgccacaga
ataagacctcagctccctggagaagacccagacgaccgtgaggcaaaatacacacacgtc
aaaagaagacgttctggagaagatccaaaaagtgaatcttctaatttggcaccaagcaga
ccgaacacaagaagtaaacaggctgcggaggagaacagtagcagaatccagctgcgatcg
aagtctcaaggcaacgccaatgaatctagccaaagtaactctcaggtaagacaccgaaag
aaaatcaaacttaacaacctttcagaggatcttcttggatctcctgagcataaaaggaga
agcaccagtgggctggattctagccagactgacatcaaatcagaatcactctccggtcat
gaaagccaaaagcacagaaaacgcaatgagattagcaaagtttcaaaggagggtggtgac
gctgaaaagcccaaagaagaattcaaccacactgttacagagagtatggtagatctgtct
cagaaagacgatccctacccacacactgactcccaaacggtcgtacctttggctcagact
gaaaagtctgaggaggtaaagtctgaagaacagactgaacaaggtgagagccaaaaggaa
aagcaagacgttgtcacatcttctccccagtgtgaagacaaatctcgagaacagatagat
tctgatgtcgtcatgttttctccagtggaagagtccaaaggtgaaagtagaaatttgcta
cagaatcaggaaattatccaagacaacgccatagaaactgtgattgacaactgtagccag
gaagactcccaggtcacgccttcgtctgacagtcagatcagacgaagatccaggcgaagc
aaagcaacagagtctgaagacaaagatgatagcatcaactcttcaggacggttgacacgt
tctcagacgtccacccctgtcaatcaacctgaagctggagttggaggcaggaccagaagg
cgcaaactagaatctagtcaaagctcaaccccagaaagttctcggtcattagattcatct
ggatcagggttgtctcaaggcaagggcagactaagatcctctcagtcatcagcatccagt
gtagagacgccagagtcctcagaagtcttagttaacgccgttcgcaaaaagaaagggagg
aaacctcgagcatctctgaagagtccacttcctcttgaaacgaaggaggacatattggaa
gatgcttctcaaaattcggagacacaaaacagtttagaagaatcattagagaaccaagat
tcaaaggaatctggaagcaagacagagtcaaatgaggaagagtctgagtccccaatgatt
actgagacaccggctgatttacctctggagacagaagattcaaagaagacagaaagtgaa
gaggcaagccaggataccaggtcactggacactactgaacaaagagactcaaacagtgaa
aaggattctttacaagaagtagaagtgcttgaatcttctgtgtttggagacgcaccagca
caagattcatgtctgctggctgaggagaaactgcaagcctcggagacgtccaaagaaaca
gcagaaaaggtttctgaaactgaaggagttactgaaaaacaggaggaatcaaattcagac
cagcaagactttccagctcctcctccagaagaaccctctcctgaggagcttcagcaaagt
cagatggagtgtgcacaggtcactgaagaggaggaaccgtctgccacacaccaggtcttg
gagggcagtgctaaggaggacattactctacaagacaatgaagatggtcaacctgagaca
tctaaggacaaactcgaaaaggcacctgccaccgaaacgtcgggtgctgctgatctggac
tgcaccactgcagcgtcctcacaagctgctgcccaggactctccagttaaacaaaaagac
ctggaggctgtaacagaaccagatgtcggacagagtcccagcaatgggctgttgaaggga
acatggtctccttcagcttccccttccaacagcatcctcaagaaatgccagaagaggcag
ttagaggtggaaacgacctctcctcttgtcaagtcccgccgtgtatcttttgctaacccc
atccaacagcaggagacggctgatgacattgaccggcgcagtccggctctgaggaccagc
tctcccagaaggtccaaaggatgtaacatccctcagcagaagcacattacaactccaaca
aaaggcatgctggtcctgagccccagaaatatccacagtccaagttacaggagctccaag
aagtgcctgatttctgaaatgacttgggagcctcgagccgtgcccagagactgcatctac
ccgtccctggtgggctgttcggcccccgtggaggctgtgctttctcagatctcttccacc
atgtggtctcgagggttcggacagctgattcgcgctcgaaacgtcaaatcagtgggcgac
ctctgcgccctgactccgtctgagataaagactctgcccatccgatctccaaagatctcc
aacgtcaagaaggcgctgaagatctatgagcagcagcgcaaagggagagcagatgagctg
aagagcttcgacgaaacggagaggatgacctctgaggtggaggaggcggccagtcctcgc
aaccatgacgacgagaagacctcagcagagactctggccacagagctgctggacgagccg
ctgcctgcagacgccgcggcggagcaccaggacggggagcagcgacccacggtgccggcg
gaccccgctgcagagctgccggcagccgtggaggctctggcttgcagggcgacccctctg
gagctcagccgctgctcaccacaacagctgctgcagatgcacgagcagctgggaggcatg
atgaggggcgtagcggtggagctgcaggcgcgcctctgccacgccagcgacaaacacaga
gtggctcccaggagcggacagacgcactga

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