Xiphophorus couchianus (Monterrey platyfish): 114148422
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Entry
114148422 CDS
T05908
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04148
Efferocytosis
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114148422 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114148422 (itgb5)
04148 Efferocytosis
114148422 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114148422 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114148422 (itgb5)
04810 Regulation of actin cytoskeleton
114148422 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114148422 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114148422 (itgb5)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
114148422 (itgb5)
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin beta subunits
114148422 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
DUF2975
Motif
Other DBs
NCBI-GeneID:
114148422
NCBI-ProteinID:
XP_027879523
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All DBs
Position
7:2428759..2484041
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AA seq
797 aa
AA seq
DB search
MWSPGRAALCWMLLETFLRSAGGLNICMSGSATSCEECLLIHPSCAWCAQEDFGKRRSLT
SRCDLKQNLQKRGCEPRFIEYPRSTISVLQNSPLSTKGSGPAQYDVVQIMPQRISLSLRP
GDQTAFSLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNFRLGFG
SFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQKQMVS
RNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPHDGRC
HLNNHNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTTVEIL
DQDSKNVIQLIIAAYNNIRSKVELTVSDHPEDISLSFTATCQDGKPLPGFRKCADLKIGE
TVSFDVSVEARGCPPRGTDQTFTIKPVGFKDRLEVAVDYQCDCSCSRTAQVNSSLCNSIG
MYNCGTCRCEPGYLGAHCECQEGEASSMYLSACREAEGKQVCSGRGECSCNQCLCYESEF
GKIYGRFCECDDFSCARHKGVLCSGHGECHCGECKCHAGFVGDNCNCSTEMSLCFSDDGK
MCSGRGSCVCGRCQCTEPGAFGETCEKCPTCPDACGTKRECIECRLFNSGRLADNETCQR
LCKDKIITVESLENEDDTAVLCVYKTEDDCVMKFTYLEHVSGRSILTALQEPECGGGPSA
LTVLLVVVSTILLVGVVLLATWKLVITIHDRREFSRFQSARVRARYLMASNPLYKDPITT
HFAEMETFEKSFNGGVH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccgggaagagccgctctgtgctggatgctgctggagacgtttctgcgctct
gctggaggtctcaacatctgtatgagcggcagcgccacctcctgtgaagaatgcctcctg
atccaccccagctgcgcctggtgcgcacaagaggacttcgggaagcgccgctcgctgacg
tcgcgatgcgacctcaagcaaaacctgcagaagaggggctgtgagccgcgcttcatcgag
taccccaggagtacaatctccgtcctgcagaactcaccgctgagcactaaaggatcggga
ccggcccagtacgacgtggtgcagatcatgccccagaggatctccctcagcctgcggcca
ggagaccagacggcgttcagcctgcaggtgcggcaggtggaagattacccggtggacctc
tactacctgatggacctctcactgtccatgaaagacgacctggacaccatccgtaacctg
ggcaccaagctggcggaggagatggggaagctgaccagcaacttccgtctgggcttcggc
tccttcgtggataaaaacatgtctcccttctcctacacggcccccaagtaccaggagaac
ccctgcaatggatacaagctcttcccaaactgtgtgcccaccttcggttttcgccacatc
ctctctctgacggacaaagtggaccgtttcaacgaggaggtgcagaagcagatggtgtcc
cggaaccgagacgctccagagggcggcttcgacgccatcctgcaggccgccgtgtgcaag
gaggagatcggctggaggaaggaggcctaccacctgctggtgtttgccacggacgacgtg
ccgcacctggctctggacggccggctgggggggctggtccagcctcacgacggccgctgt
cacctcaacaaccacaatgagtacagcgcctccaccaagatggactatccatccctcgct
ctgcttggagagaaactggccgaaaataacatcttcctcatcttcgccgtgaccaaacgg
ctctacgttatttataagaatttcacagctctcatacctggaaccacagtggagatcctg
gaccaggactcgaagaacgtcatccagctgatcatcgccgcctacaacaacattcggtcc
aaggtggagctgactgtgtcggatcaccccgaggacatcagcctgtccttcaccgcaacc
tgccaggatgggaagccgctgccaggctttaggaagtgtgcagacttgaagattggagaa
acagtgtccttcgatgtgagtgtggaagctcgtggctgcccgccccgcggcaccgaccag
accttcaccataaagccggtggggtttaaggaccgcctggaggtggctgtggactatcag
tgtgactgcagctgcagccggacggcgcaggtcaacagcagcctctgcaactccattggc
atgtataactgcggtacctgccggtgtgagccgggctacctgggcgcccactgcgagtgc
caggagggcgaggccagcagcatgtacctcagcgcttgccgggaagccgagggcaagcag
gtctgcagcggccgcggcgaatgcagctgcaaccagtgcctctgctacgagtccgagttt
gggaagatctacggaagattctgcgagtgcgacgacttctcctgcgccagacacaaaggc
gtcctctgctcaggtcatggagaatgccactgtggggagtgcaaatgccacgccggcttc
gtgggcgacaactgtaactgctccacagagatgtcgctctgcttctcggacgacgggaag
atgtgcagcgggcgagggagctgcgtgtgcggccgctgtcagtgcaccgagccgggggca
tttggagagacctgcgagaaatgccccacctgccccgacgcctgcggcaccaaaagggag
tgtatcgagtgtcggcttttcaactcggggagactcgcagacaacgagacctgccagcgc
ttgtgcaaggataaaatcataactgtggagagcctcgaaaacgaggacgatacagcggtg
ctgtgtgtgtataagacggaggacgactgtgtgatgaagttcacgtacctggagcacgtc
agcggacgctccatcctcaccgcgctccaggagccggagtgtggaggtggtccgtctgcc
ttaacggtcctactggttgtggtgagcaccatcttactggtgggagtggttctgctggcc
acctggaaactggtcatcaccatacacgaccggagagagttctctcgcttccagagcgct
cgggtccgcgcccggtacctcatggcatccaaccctctgtacaaggaccccatcaccact
cactttgcagaaatggaaacgtttgagaagtcttttaacggcggggtccactga
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