Xiphophorus couchianus (Monterrey platyfish): 114148425
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Entry
114148425 CDS
T05908
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114148425 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114148425 (hspd1)
03110 Chaperones and folding catalysts [BR:
xco03110
]
114148425 (hspd1)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114148425 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114148425 (hspd1)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
114148425 (hspd1)
Messenger RNA biogenesis [BR:
xco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
114148425 (hspd1)
Chaperones and folding catalysts [BR:
xco03110
]
Heat shock proteins
HSP60 / Chaperonin
114148425 (hspd1)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
114148425 (hspd1)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114148425 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
114148425 (hspd1)
Exosomal proteins of breast cancer cells
114148425 (hspd1)
Exosomal proteins of colorectal cancer cells
114148425 (hspd1)
Exosomal proteins of bladder cancer cells
114148425 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
114148425
NCBI-ProteinID:
XP_027879525
UniProt:
A0A3B5MRV8
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All DBs
Position
7:2986574..2994748
Genome browser
AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKEVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKRVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGRVGEVQITKDDTLVLKG
GGSPADIEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDALKTANNDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGASDMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEMPAGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctacctaccgtcatgaaacaggtgaggcctgtgtgccgggccctggctcct
cacctcacacgagcatacgccaaggaggtgaagtttggggcggacgcgcgcgccctcatg
ctgcagggggtggacctgctggctgacgctgtggccgtcaccatggggccaaagggtcgc
actgtcatcatcgagcagagttggggcagtccaaaggtcaccaaggatggcgtgacggtg
gccaaaagcatcgacctgaaggacaagtacaagaacattggggccaagctggtgcaagat
gtggccaacaacaccaacgaggaggccggcgacggcaccaccacggccacggtgctggcg
cgggccatcgccaaggagggcttcgacaacatcagcaagggcgccaaccccgtggagatc
cggcgtggggtcatgttggccgtggagacggtcatcaacgagctgaagaagctctcgaag
cctgttacaaccccagaggagatcgcacaggtagctaccatctcagccaatggagacgtg
gaaatcggtaacatcatttccaatgccatgaagagagttggccgcaagggagtcatcaca
gtaaaggatgggaagactttgcaggacgagctggagatcattgagggaatgaagtttgac
cgtggctacatctctccttacttcattaacaccgctaaaggccagaagtgtgagttccag
gacgcctacctgctgctcagtgagaagaagatctccagcgtccagagcatcgtaccagct
ctggaaatcgccaaccagcaccgcaaacctctggtgattgtagctgaggatgtggacgga
gaagctctgagcaccctggttctcaacaggctgaaggtcggtcttcaggtggtcgctgtc
aaagctccaggttttggagacaacaggaagaaccagctgaaggacatggccatcgccacc
ggcggcacggtgtttggtgatgaagctctgggtctggctctggaggacatccaggctcac
gacttcggcagagtgggtgaggtgcagatcaccaaagacgacaccctggttctgaagggc
ggaggcagccccgccgacatcgagaagcgagcggcagagatcgccgagcagctggagaac
accaccagcgactacgagaaggagaagctcaatgaaaggctggccaagctgtctgacggg
gtggccgttctcaaggtggggggaaccagtgacgtcgaagtgaacgagaagaaggaccgc
gtgacggatgctctgaatgccacccgggccgccgtggaggagggcatcgttctcggcgga
ggctgcgctctgctgcgatgcatcccggcgctggacgccctgaaaaccgccaacaatgac
cagaagatcggcgtggacatcatcaggcgggcgctccgtattcctgccatgaccatcgct
aagaacgctggtgtggagggctccctggtggtggagaagatcctacagggagcgtcagac
atgggctatgacgccatgcagggagagtacgtcaacatggtggagaagggcatcatcgac
cccacaaaggtggtaaggacggcgctgatggacgccgccggagtcgcgtctctactttcc
accgccgaggccgtcgttacggagatccccaaggaggagaaggagatgccagcaggcatg
ggcggcatggggggaatgggaggaatgggaggcggcatggggttctga
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