Xiphophorus couchianus (Monterrey platyfish): 114148504
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Entry
114148504 CDS
T05908
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114148504 (aff3)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114148504 (aff3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
114148504
NCBI-ProteinID:
XP_027879634
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All DBs
Position
7:11720183..11737670
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AA seq
1242 aa
AA seq
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MPTVLGGKGKLSIVCLLLRYAYSQGKRSQHKCCAKDILEDMTQSWPSQQALGGEQTQRIL
YNPKDARHPATQQRQSRGDTQQRMARHPYVAPHKSMLADDLKISSDEDDTQRAIHESASC
DRHSLSAQRAHTHGRRVRHSSSESSDSDSAESGSSSLRSHSPSPELHPDSPSPASARPLC
NNKEVDHRSTTQWQLDKWLKRSKKKSARTDQDLPQPIAEPEASPLSQRAPSPARSWDCNQ
EYSPSQTPIPSPQFSYSNNNSPVPSPGYSYCPSPSPFPSTCPSPTSSPQNSPPPSPVLSV
CPSPCGTPRTSRSPSPIPNHLPRSPSPTLPTPSRGFHYHGGQNQNQSHTILTSTPHRTKI
RPWIAPLLGTSLKSKPPSNIHLQPSFQLKSKNHHTQDQVQSQSKLKDFGGLNSQLNPNQK
STHKSTSYPRTKQFSNTPKTKNSTHFDQIQGNQSKSKPQPPFQQPSQQSPKRTKHVVPTG
CETNTAPSTHSTSASKATRNSITGSTSGPFSNLIHWTKLWEATNSNPTHPNHAKTSQRKP
QSKEQEVVQRKHHLIQAERRIHESKEDRHHHEQQLGKLERKEDRRLAEEQLLRRPWIQSL
PEEEEEEEERATEQQGGRKNTARGENRKKGEQAKEEWKAVRQVSSNDKQHHLRETLDCQG
RTKKGRRCEETREVIRDQLPLLSTHSPPPQRPSFNSSSSSLSSSSSTTPSNSDSESECLG
SITKVSAESTSHRRVTKTGNQAASRPDTTRPKTVHPRRPSSDNPCERRQQSEAKQRLYTL
VPFGRGEKTPSTAQRGLRNLVVQIDLCLLKRVPDSPTDSTGKKLSPSKSSSLMKEKSKEA
MKHVYDPETSVTDGKRKRKLENGIGQRETKRSLLYLNEAPGQKEPSSLPAENIITETVHN
GYLEEFLDSKRPASPLSPLSPLPQSPEPTKPVSKTKTTTEQQQSRAQKSKDKSRDADVKP
KTEVECVKVSRQHQPPPESSWGPAGHRGSVPSQEISHHAEYYLHEAKRMKHRADAMVDKL
GKAVNYVDAALSFMECGKAMEEGPLEAKSPFTMYSETVELIRYAMRLKGHSGPGARQEDK
QLAVLCFRCLAVLYWQMFRLKKDHALKYSKVLLDYFKSSPKVPTTPPGWMDSGKATTGLP
SSLSPTAKHHRRGSNEGSSSASLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKE
NKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaagggaaactttccattgtctgccttttgctccgatac
gcatattctcagggaaaaagaagccaacacaagtgctgtgccaaagatattctcgaggac
atgactcagtcctggccttcccagcaagccttggggggggaacagacccagcgaatcctc
tacaaccctaaggatgcaaggcatccagccacccaacaaaggcaaagccgtggggacact
caacagcgaatggctcgtcatccttacgtggcacctcacaaatcaatgcttgctgatgac
ctgaagataagtagtgatgaagatgacactcagagggccattcatgagtcagcttcctgt
gacagacacagtctgtcggcgcagcgagcgcacacacatggcaggagggtgagacattcc
agctcagaatcctcggactcagactctgcagagtcgggcagcagcagccttcgttctcac
agcccgagtccagaacttcacccagattctccgtcgcctgcaagtgcgcggccactgtgc
aacaacaaggaggttgatcatcgttccactacccagtggcagttagataaatggctgaaa
agatcaaagaaaaaatctgccaggactgatcaagatttgcctcagcctattgcagaaccc
gaggcctctcccctaagtcagagagccccctcaccagccaggtcatgggactgcaatcag
gagtatagcccgagccaaacccccattccaagtccacagttcagttacagtaacaataac
agcccagttcccagccccggttacagctactgcccaagtcccagcccattccccagcacc
tgtccaagtcctacctctagtccacaaaatagtccacctccaagtccagttctaagtgtt
tgccccagtccttgtggtaccccaaggaccagtcgaagcccaagtcctatacctaaccat
ctcccaagaagtcctagccccaccttacccactccatcaaggggttttcactatcatggg
ggtcagaaccagaaccagtcacatactattctaacatctaccccccacaggactaaaata
agaccatggattgcaccattgcttggcaccagtttaaagagtaagcccccgagtaacatt
catcttcaaccttcttttcagctcaagtctaagaatcatcacacacaagaccaagtccaa
agccaaagcaagttgaaagattttggaggcttaaattcccaactaaatcccaatcaaaaa
tctacacacaagtctacttcatatccaagaactaaacagttttccaacacccccaaaact
aaaaattcaacacattttgatcaaattcaaggcaaccaatccaaatccaagccacagcca
ccatttcaacaaccttcacaacaaagccccaaaagaacaaagcacgtagtccccactggc
tgtgaaaccaacacagctcccagtactcattccacatctgccagtaaagctactagaaat
tctattactgggtcaacctctggacccttctctaaccttatacactggacaaagctgtgg
gaggctacaaactcaaaccccacgcatccaaaccatgccaaaacttcacaaaggaaacct
cagtctaaggaacaggaagtagttcagagaaaacatcatctgatccaagcagagaggaga
atacatgaaagcaaggaggatagacatcatcatgaacaacaactagggaagctagaacga
aaggaagacagaaggctggcggaggagcagttactaagacgtccctggatccaaagtttg
ccagaagaagaggaggaagaggaggaaagagcaacagaacagcaaggtgggagaaagaac
acagcaagaggagaaaatagaaagaagggggagcaggcaaaggaagaatggaaagcggtc
agacaagtgtcttctaacgacaaacaacaccaccttcgagagactttagactgtcaaggc
aggacaaaaaagggaagaagatgtgaggagacgagagaagtaatcagagaccaattaccc
ctattatccacacactccccacctccccagagaccatccttcaactcctcctcctcctca
ttatcatcatcatcttctacaaccccgtccaactcagactctgaatctgaatgtcttggc
tctatcaccaaggtttcagctgagtccacttctcacaggagagtcaccaagacagggaac
caagctgcaagcagacctgacactaccaggcctaagacagtacaccccagacgacccagt
tcagataatccatgtgagaggaggcagcaaagtgaggcaaagcaaaggctctacacacta
gtcccatttggacgaggagaaaaaactccttccactgcccaacgggggctaagaaatctg
gtggtgcagatagacctctgtcttctcaagagagtcccggacagtcctacagattccact
ggtaaaaaactatccccttccaaatcatcttcattgatgaaggaaaaatctaaagaggct
atgaaacacgtttatgaccctgagacttccgttacagatggcaaaaggaaacgcaagcta
gagaatggcataggtcaaagagaaaccaagaggagtcttctttatctaaacgaggcacca
gggcagaaagaaccttcatcattaccagctgagaacatcattactgagacagtgcacaat
ggatacctggaggagttcttggacagcaagaggccagcatctcccttgtctcccttgtct
ccactgccccagagtcctgagcccaccaagcccgtctccaaaacaaagacaactaccgaa
cagcagcagtcccgtgcacagaagagcaaagacaagagcagagatgcagatgtaaagcct
aagactgaggtggagtgtgtaaaagtatcaaggcagcatcaaccaccacccgagtccagc
tggggaccagctggtcacagagggtccgtaccaagccaagaaatttctcaccatgctgaa
tactacttacatgaagctaaacggatgaagcaccgtgctgatgcaatggtggacaagcta
ggaaaagctgttaactacgtcgatgcggctctgtccttcatggaatgtgggaaggcgatg
gaggaggggccactcgaggcaaagtctcctttcaccatgtattctgagacagtggagctg
atccggtacgcaatgaggctcaaaggtcactctggccctggagcgagacaggaagacaaa
cagctggcagtgctgtgtttcagatgccttgccgtcctttactggcagatgtttcgctta
aaaaaagatcatgcactaaagtactccaaagtgctacttgactatttcaagagttctccc
aaagtgcctacaacgccacccggctggatggactctgggaaggctacaacaggactcccg
tcctcactgtcacccactgcaaaacaccacagacggggttcaaatgagggcagcagctct
gcgtcgctcataagcataccccagcgcatccaccagatggcagcaaaccacctgaacatc
accaacagtgttctgtacagctatgagtactgggaggtggcagacaacctcgcaaaggag
aataaagaattcttcaattacttgaatactttatctgggccattgactcttcacagtagc
attgctcacgctgttcaatacaccaggcaggctcttcagtggatacgcattagtgccaaa
ctgaactga
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