Xiphophorus couchianus (Monterrey platyfish): 114148512
Help
Entry
114148512 CDS
T05908
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114148512 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114148512 (pou2f1)
03021 Transcription machinery [BR:
xco03021
]
114148512 (pou2f1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114148512 (pou2f1)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
114148512 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
114148512
NCBI-ProteinID:
XP_027879652
LinkDB
All DBs
Position
7:complement(12307184..12330242)
Genome browser
AA seq
718 aa
AA seq
DB search
MADGGAASQDESSAPDAKVNNQSETSKCEMESGDENTGVQTNGLDFQRQTVPTTISNAHA
QALFQQSKSEDSAALPASVQQSVLPQTQLMLAGGQIAGLTLSPAQQQLLLQQAQAHLLAA
AVQQQQHSTSQQSSTTGANISATAAAPITQLPLSQPIQIAPQLPQNLTLPQFVLVQSGHP
IATPLQPTQFIISQTSPAQQGILPAQSLLTQLPQSQANLHPTQPSITLATQPASPTRTTA
TTNIQSLPHSQTPPKRMDTPTMEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLSSDQSLSSPSALGSSGLG
IEGINRRRKKRTSIETNIRVALEKSFLEQNQKPTSDEISIIADQLNMEKEVIRVWFCNRR
QKEKRINPPSSVNNGGGSTSIKTIFTPSSPLVASTASLVSSPTINTSTTLTVNPVMPLTS
TSVSSLAFTGTTVGGTNTASVISTAPVLTTSTSAPSISLSTTTVQSTSTDSKTSIQALVT
QAPTSIATSLATGQVMVAAPGLTTAQLGAAQLPTSASFAAMAAAAGLTPGLMASSQFTPG
GALLSLTPGGLGSALSPLMNNSTLAAIQALASGGHIPITSLDGGNLLFANASAANTPNLV
TTPLCLYPQNLSLLASNPVSLVSAGAGGLQVTADAHHQVTTAAVPVQASTITTASKAQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagcaccagatgctaaagtgaat
aatcagtcagaaacttctaaatgtgaaatggaaagtggtgacgagaacaccggagtccaa
accaatggactggactttcagcggcagacggtgccaaccacaatctctaacgcacatgca
caagccctcttccaacagtcgaagtcggaagactcggccgctcttcctgcctccgtccag
cagagcgtgttgcctcagacccagctaatgttggcagggggacagattgctggattgacc
ctgagcccggcgcagcagcagctgctgctccagcaggcccaagctcatctcctggctgca
gccgtgcagcagcagcagcactccaccagccagcagagcagcaccactggagccaacatc
tcggccaccgcagctgcgccgatcacccagctgcccctgtcacagcccatccagatcgcc
cctcagctgccgcagaatctaaccctgcctcagtttgtcctggttcagtctggccacccg
attgcaacgccgttgcagcccactcagtttatcatctcgcagacgtcgccggcccagcaa
ggcatattgccagcccagagtcttctaactcaactacctcaaagccaagctaacctccat
ccgactcaaccaagcattacccttgcaactcagcctgcatctccaactcgtacgacggca
accaccaacattcagagtctgccccacagtcagacgccccccaagcggatggacaccccc
acgatggaggagcccagtgatcttgaagagctggagcagtttgccaaaacgttcaagcag
cgacgaatcaaactgggcttcacacagggggacgttggcctggctatggggaagctgtat
ggaaacgacttcagccaaaccaccatttctcgctttgaggccttgaatctgagctttaag
aacatgtgcaaactcaagcctttgctggagaagtggcttaatgatgcagtttgtgcagag
aatctgtcatctgaccagtccttgtccagccccagcgccctgggctcctcaggcttgggc
atagagggcatcaaccgcaggcggaagaaaaggaccagtatcgagaccaacattcgagtg
gccttagaaaagagctttctggagcagaaccaaaaacctacctctgacgagatcagcatt
atcgctgaccagctcaacatggagaaggaggtgatccgggtctggttctgcaatcgtcga
cagaaagagaagcggattaacccgcccagcagcgtcaataatggaggaggcagcacatcc
atcaagaccatctttacccccagcagccctttggtggcaagcacagcaagccttgttagc
agtccaactattaacacatccaccaccctgactgtaaacccagtgatgcctctcaccagc
accagtgtctctagtttggctttcacaggcacaacagttggaggcacaaacactgcatcg
gtcatctccaccgcacctgttcttaccacgtcaaccagcgctccatcgataagcctatcc
acgaccactgttcagtccacatccacagacagcaaaaccagcattcaggcgctggtcacg
caggctccgacgtccatagcgacgtccttagcgacgggccaggtgatggtggccgctccg
ggcctaaccacagcacagctgggggccgcccagctgcccactagtgccagctttgcagcc
atggctgcagctgcggggctgacccctggactgatggcatcatcccagttcactccaggg
ggcgcccttctcagcctgactcctggggggcttggcagtgcactgagtcctctgatgaat
aacagcactctggctgcaattcaagcactggcatcggggggtcacatccctatcacgtct
ctggacggcggcaacctgttgtttgccaacgcctcggccgccaacacgcccaacctggtg
accacgccgctctgcctctacccccagaacctgtcgctgctcgccagcaaccccgtcagc
ctggtgtcggcgggtgcgggcgggctccaggtcaccgccgacgcccaccaccaggtcacc
accgctgccgtgcctgtgcaagcctcgaccattaccactgcctccaaggctcagtga
DBGET
integrated database retrieval system
