Xiphophorus couchianus (Monterrey platyfish): 114148576
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Entry
114148576 CDS
T05908
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114148576
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114148576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
114148576
NCBI-ProteinID:
XP_027879754
LinkDB
All DBs
Position
1:complement(4072452..4125750)
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AA seq
1797 aa
AA seq
DB search
MQAALLMLLCGLTATVGQEPDQAYGCAQGSCYPATGDLLVGREKNLKASSTCGMRKKERY
CIVSHLQDEKKCFECDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSNVFIE
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFAHDCAVFFPGVSTGPLQN
INDVICESRYSDLEPSTEGEVIYRVLDPAIKIEDPYSPNIQNQLKITNLRLNFTKLHTLG
DTLVDNRAEIREKYYYAIYELVVRGNCFCYGHASECAPIEGIRDDIEGMVHGRCVCNHNT
KGLNCEQCGDFYNDQPWRPAEGRNTHACKKCDCSDHSDKCHFDMAVYLATGNTSGGVCDD
CQHNTMGRNCEICKPFFYKDPTRHIRDSRVCIACDCDPDGSENGGLCDSHTDPSLGMVGG
QCRCKPNVEGPRCDKCKTSFFGLSANNPVGCQPCRCDSRGTVLGSSMCDPFSGDCICKRL
VIGRFCDQCLSEHWGLSHDLNGCRGCECDIGGALDNQCSIDSGQCRCRSHITGRDCTKVE
SGYFFMALDHFIYEAEFAQMGQGCTLETREHQPGRPAQWTDIGFAQVPQGGTLEFLINNI
PYSMEYDLVIRYESQMPRDWEEVQITVIRPGSIPTSSPCGNTIPDDDRLTIPLPAGARFV
VLPQPVCLERGVTYSLRLEFTRYQDANSILNGADYAVILIDSIVLMPRHSSMEMFNTGDL
ASNVRKQTFERYRCHEGARSVIRPQISDTCAKLISSMSAVINDGALACNCDPQGSISSLC
DPRGGQCRCRSNIIGRRCDKCAPGTYGFGPSGCIPCECSLDGSVTRLCDKYTGQCQCRPG
AFGQRCDGCQAGHWGFPSCRPCHCNGHANHCDQRSGVCINCRDNTSGDSCDRCANGYYGN
PVLGISSGGQCRPCPCPDGPHSGRHFATSCYQDNRNRQIICNCNQGYTGIVKRSGATVFK
RARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSDMDACDRRTGECRKCLYNTEGPNCGI
CRSGYFGDASRRNCRKCICNFLGTERSQCMEREDCVCQRATGQCQCLANVVGLSCDHCAP
NHWNLASGNGCEACNCDPNNSVTSSCNEFTGQCQCREGFGGKTCTECEENFWGDPRTLCR
ACDCDWRGIETSQCNRATGHCVCQQGVSGVRCDQCARGFAGQFPNCQPCHQCFGDWDRIV
QDLAVRTKALAERANEIQSTGLIGPYEKTFKDLEAKLAQAQAIVNARNATTAAVATLMAL
IEDLRAQIGETTEALNHVEGDLTIIQDRNSDASKELNTLEREARELNLTSEQLKHQLDIL
KNSNFLGAYDSIRSSYNMSRDAERRANQSTTTKPSTVSQSADTRRRTERLIAAKKDDFSR
KNSANKRALGELKARAQGLDMKTLNEKICGSLDDVPCTENPCGGAGCRDDEGNRHCGGLN
CNGAVAAADNALERGKHAEKELNKAMGEMQELFTKVKEAKAKAEEAKGKAQAALDKAKAT
KNKVEHSNNNLRDLIKQIRDFLTQEGADPDSIEAVANHVLQLSIPASPLQIRQLADEIKD
RVRSLSNVDAILQQTQDDVQKAEKLLLDAKRARHRAEGLKNTAETVKQALVDAKTAQTSA
EKAIASARADIRDTENRLAEIETETSNSEKNLDDAMRRLGTLEQEINELKTKRARNSMAA
ARAEETATMARDKANEAKQILDGQLTDKFNEVQQRVDTKAKAVQDAKKKAESLREEAKEL
LNDAQNKLQKLAELEKNYEENQRKLEGKVRQLDGLEDKMRSILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgcgctgttaatgctcctctgcggcctgactgccacagttggccaggaacca
gaccaagcctatggctgtgcccaaggcagctgttatccagcaactggggacttgttggtt
ggaagggaaaaaaacttgaaggcctcgtccacttgtggcatgagaaagaaagagcggtat
tgcatcgtcagtcacctgcaggatgagaagaaatgttttgagtgtgactccagacgacca
tacgacccagtctacaacaccattaatcaccggatagagaatgttatcaccaccttcaaa
ccacatcggaaaaagtcctggtggcagtcagagaacggaaagtcaaatgtttttattgag
ctggatcttgaggcagagtttcattttactcatctgattatgacatttaagactttccgc
cctgctgccatgcttattgagcgatcagcagattttggtcgaacctggcagatctatcgc
tactttgctcatgactgtgctgtttttttccctggagtctctacgggtcctttgcaaaac
atcaacgatgtgatctgtgaatcccgttactctgacctggagccatcgacagagggcgag
gtcatctacagagtcttggatccagctatcaagattgaggacccatacagccccaacatt
cagaaccaactgaagatcaccaacttaagactgaacttcaccaaacttcacacacttgga
gacaccctggtggacaacagagctgaaattagggagaaatactactacgccatatacgaa
cttgttgtacgtggaaactgcttttgctatggccacgcctctgagtgtgcacccattgaa
ggcatcagggacgacatagaaggaatggttcatggcagatgtgtgtgtaaccataacaca
aaaggtttgaactgtgagcaatgcggtgacttctacaatgaccagccttggaggccagct
gaaggccgcaacacacacgcttgcaagaagtgtgattgcagtgaccattcagataagtgt
cactttgacatggcggtttatttggccacgggaaacacgagtggaggggtgtgtgatgac
tgccagcacaacacaatgggcagaaattgtgagatctgcaaaccattcttctacaaagat
cccacaaggcacataagagactcccgtgtctgcatagcttgtgattgtgacccagatggc
tcagagaatggaggattgtgtgacagccacactgacccgtcgctcggcatggtgggaggc
cagtgccgttgcaagcctaacgtagaagggccacgctgcgacaagtgcaagaccagcttc
tttggcctgagtgccaacaaccctgtggggtgccaaccttgtcgatgtgactccagagga
accgtgttgggcagctccatgtgtgacccattcagtggagactgcatctgcaagcgactt
gtcattggacgcttctgtgaccagtgtctatccgaacactgggggctgagccacgacctg
aacggatgtagaggttgcgaatgtgatattggaggggcactcgacaaccaatgctccatt
gatagtggtcagtgtcgctgccgcagtcacataacgggacgcgattgcacgaaggtggag
tctggatatttttttatggctctggatcatttcatttatgaggctgagtttgctcaaatg
gggcagggttgcaccttagagaccagggaacatcagcccggtcgccccgctcagtggaca
gatatcggcttcgctcaggtccctcaaggcggcactttggagtttctgataaataacata
ccttactctatggaatatgatttagtcatccgctacgaatcccagatgccccgggactgg
gaggaggtgcagataaccgtgatccgtccaggttccattcccaccagcagcccttgtggg
aacaccatcccagatgacgacagactcaccatccctctgccagccggagccaggtttgtg
gttcttcctcagccagtgtgtttggagagaggtgtgacatactccctccgcttggagttc
acacgttatcaagatgctaacagtatcctcaatggagcagactacgctgtcatcctcata
gactctattgtgctgatgccgcgtcactcctccatggagatgttcaacactggggatctt
gcctcaaacgtcaggaagcagacctttgagcggtaccggtgccacgaaggagcaaggagt
gtgatccgcccacagatcagtgatacctgtgctaaactcatcagcagcatgtcagccgtt
attaatgatggagccctggcttgcaactgtgaccctcaggggtccatcagctccctttgt
gatccccgtgggggccagtgtcgctgcaggtccaacatcattggtcggcgctgtgacaag
tgtgcaccaggaacctacggcttcggaccctcaggctgcataccatgcgagtgcagctta
gacgggtcggtgactcgactctgtgacaagtacaccgggcagtgccagtgccgtcccgga
gcgtttggtcagagatgcgacgggtgtcaggcgggtcattggggctttcccagctgccga
ccctgccactgtaacggacatgccaaccactgtgaccagagaagcggagtctgcatcaac
tgcagggataacaccagcggggacagttgtgacaggtgtgccaatggttattatgggaac
ccagttttgggtatatcatctggtggtcagtgtcgtccgtgcccatgtccagatggaccc
cacagtggacgccactttgccacatcttgttaccaggacaaccgcaatcgacaaattatc
tgcaactgtaaccaaggttacacagggattgttaaacgctccggggcgaccgtttttaag
cgcgcccggtgtgaagaatgcgccccaggttactacggcaacccctctcagccgggaggg
cgctgccagccatgccagtgcaacaataacatagacatgtcagacatggacgcatgcgac
aggcggacgggggagtgcaggaagtgcctttacaacacagagggtcccaactgtggcatc
tgcaggagcggatactttggagatgcatcccgacgcaactgcaggaagtgcatatgcaac
tttttgggcacggagcgcagccagtgcatggagcgtgaagactgtgtgtgccagcgtgcc
acgggccagtgtcagtgtctggcaaatgtggtaggtctgtcgtgcgaccactgcgccccc
aaccactggaacctggccagtgggaatggctgtgaagcatgcaactgtgatcccaacaac
tctgtcacatcctcctgcaatgaatttacagggcagtgtcaatgccgagaagggtttgga
ggaaagacctgcacagaatgtgaggagaacttctggggagacccccgaacgctgtgcaga
gcgtgcgactgtgactggcgtgggattgagacgtctcagtgcaaccgcgcgaccggccac
tgcgtctgccagcagggggtgtcgggcgtccgctgcgaccagtgtgccagaggctttgcc
ggccagtttccgaactgccagccctgtcaccagtgcttcggggactgggatcggatagta
caggacctggcagtacgcaccaaggctcttgcggagcgagccaatgagattcaaagcact
gggcttatcggaccttatgagaaaaccttcaaagacctggaggcgaagctggctcaagct
caggccatcgtcaacgcaagaaatgccacgactgcagctgtggctactctgatggctctt
attgaggatctcagggcacaaattggtgagacaaccgaagccctaaaccacgtggaggga
gatttaacaatcatccaggaccgaaactctgacgcaagcaaggagctgaacactctggag
cgggaggctcgagaactgaacctcacatctgagcagctaaaacatcaactggatattctg
aaaaactctaacttcttaggagcgtatgacagcatccgcagctcctacaacatgtctcga
gatgctgagcgacgggccaaccagtcgaccaccaccaagcctagcacggtcagtcagtcg
gcagacactcgccgccgcaccgagcgcctcattgccgcgaagaaggacgacttcagtcgg
aagaactcagcaaacaagcgagcgctgggggagctgaaggcccgagcccagggtctggac
atgaaaacgctcaatgagaagatttgtggttctctagacgacgttccctgcacggagaac
ccctgtggaggagctggttgccgtgacgacgaagggaaccgtcactgcggaggcctgaac
tgcaacggagccgtggctgcagctgacaatgctttggagcgaggcaaacatgcagagaag
gagctgaacaaagccatgggggagatgcaggaactcttcaccaaggtaaaagaagctaag
gccaaggcagaggaggctaagggtaaagcccaagctgctctggataaagccaaggccaca
aagaacaaagtagagcactccaacaacaacctcagagacctgatcaaacagatcagggac
ttcctcactcaggagggagccgatccagacagcatcgaggcggtggcgaaccacgtgctg
cagctctccatccccgcttcaccgctacagatcagacaactcgccgacgagatcaaggac
cgcgtccgcagcctgtccaacgtggacgccatcctgcagcagacgcaggatgacgttcaa
aaggcagagaaactgctgctggacgctaagagggcaaggcatcgtgctgagggattgaaa
aacacagcggagacggtgaagcaggccttggtggatgctaagacagcccagacttcagct
gagaaagccatagcgagtgccagggcagacatcagagacactgagaatcgactggctgag
attgagacagaaacctccaacagtgagaagaacctggatgatgcaatgcgtcgcctcggc
acacttgaacaggagatcaatgagctgaagaccaagcgagccagaaacagcatggcggca
gcccgagctgaagagacggccaccatggctcgggacaaggcaaatgaagccaagcagatt
ctagacggccagctgacagacaaattcaacgaggtgcaacaacgagtggacaccaaggcc
aaggccgtgcaggacgccaagaagaaggcagagagtctccgagaggaagccaaggagctc
ctcaacgatgctcagaataagctacagaaactagcagagctggagaaaaactatgaggag
aaccaaaggaagctggaggggaaggtccggcagctggatgggttggaggacaagatgagg
agcatcctcaacgacataaacaaacagatccagatctacaacacgtgccagtaa
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integrated database retrieval system
