Xiphophorus couchianus (Monterrey platyfish): 114148652
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Entry
114148652 CDS
T05908
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
114148652 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xco04050
]
114148652 (edar)
Cytokine receptors [BR:
xco04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
114148652 (edar)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
114148652
NCBI-ProteinID:
XP_027879863
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Position
7:20709870..20763733
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AA seq
522 aa
AA seq
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MSQSRGQKKFVFLSLILVSRLFVSAEYSSCGEYEFFNQTSNSCQACPQCQPGQEPHMNCG
YGMKDEDFACIPCAQGKYSKGKYEICRRHKDCDALYKATVRVAGTAESDAECGPCLPGYY
MLDNKPRNAYGMVCHSCQNAPSNTKECMQISKPKEKPPINPGSTTVFPHRIKESPGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPGGHACCSGQVVKAVEAQTIKQDDKKDVPD
NVVIFSEKDEYDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEPSSDKQGSVESASPN
PNLCLVDLGNKPDLSLLSLGLLDRVRTSNGTPIVAASHTINIQSPNHINSVNHIASTNHI
SSMNGINNNKTPGMLQSRRKKILELYARTCNVTEGLSPTELPFDCLEKASRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CVDVLGTSEVVAVAGRQSINSFHSQLVCPSQCTSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagtagaggtcagaagaagtttgtcttcctgtcgttaatattggtgtctcgt
ctgtttgttagtgctgagtactccagctgcggcgagtacgagttcttcaaccagaccagc
aacagctgccaggcctgtcctcagtgccagccagggcaagaaccgcatatgaactgtggt
tacggtatgaaggatgaggactttgcttgcataccgtgcgcgcaagggaaatactccaaa
ggaaagtacgagatctgcaggcgccacaaggactgtgatgctctctacaaagccactgtc
cgtgtagcaggaactgctgaaagtgacgctgaatgtgggccatgtttaccagggtattat
atgttggacaacaaacccaggaacgcttatgggatggtttgccattcctgccaaaatgcc
ccgagcaacacaaaagaatgcatgcaaatcagcaaacccaaagaaaaaccaccaattaac
cctgggagcactacagtcttccctcacagaattaaagaatcacctggacagggtcattta
gccacagcgcttattatcgccatgtcaaccattttcatcatggctattgccattgttctc
atcatcatgttttatatcttgaaggccaagccgggtggccatgcatgttgttctggccag
gttgtgaaagctgtggaggctcaaaccatcaaacaagatgacaagaaagatgtccctgat
aatgtggtgattttctctgagaaagatgagtatgacaaattgaaagcagcccctcagaag
acagtgaaaagtgaaaatgatgcatcatctgagaatgagcagttgttgagccgcagcatc
gacagtgatgaggagccgtcatctgacaagcagggatctgtcgagagcgcgtcccccaac
cccaacttgtgcctcgtggacctgggcaacaaacctgacctctctctgctctctttggga
ctcctggaccgcgtccgcacatccaatggtacccccatagttgcagccagccacaccatt
aacatccagagtcccaaccacatcaacagtgtcaaccacattgcctccaccaaccacatc
agcagcatgaacgggatcaacaacaataaaaccccagggatgctacagagtcgaaggaaa
aagatactagagctgtatgctagaacctgcaatgttaccgagggcctaagccctacagag
cttcccttcgactgcctggagaaggccagccgcatgctgagttcctcctacagcagcgag
gcggctgtggtgaagacatggaggcatctggcagagagtttcggcctgaagcgtgatgag
atcggcggcatgagcgacggcctacagctctttgaaagagtgagcacggccggctacagc
atccctgacctcctcactcggctggtgcagatcgagaggctggacgctgtagagtcactg
tgcgtggatgtgctgggaaccagcgaggtggtggcagtggctggacgacagagtatcaac
agctttcacagccagttggtgtgtccgtcccagtgcacctctccctcccagcgttgtgcc
agtgtctga
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