Xiphophorus couchianus (Monterrey platyfish): 114148683
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Entry
114148683 CDS
T05908
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114148683 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114148683 (gtf2e1)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
114148683 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
114148683 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
DUF1272
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
114148683
NCBI-ProteinID:
XP_027879922
LinkDB
All DBs
Position
7:29658164..29667108
Genome browser
AA seq
447 aa
AA seq
DB search
MIEPEVLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STSRASFRCPCCFSTFTDLEANQLFDHMTGMFRCTFCQTEVEEDESVCPDARTLVARFNE
QIEPIYALLRETEDINLSHDLLEPEPTEIPALKQSRERAAAAAGNAAGGPHREAWSNKGS
TYADLYIQNVVISMEEQDDQKKQVNEGKPPKERPVWLTQSTVQGAYNEPDALKSRGDIAA
GAQDGAAGHGAGQADENEEVMRALLIHEKRAVAGAGVGGASAAARGLASATANASDSESD
TSESEDELPSGPTTATASQHRAVEEVEEEDDDDDFEEVGDEPMVMVGGRPFSYREVSQRP
ELVEQMSMQEKEAYIEMGQNLFQDMFF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacctgaggtactaaccgaagtccctgcgtctctgaagcggctggctaagcag
gttgtaaggggtttttatggagtagaacatgccttggctctggacgtgctgatacgtaac
ccatgtgtccgagaagaggacatgctggagctgctgaagtttgaccggaaacagctgcgc
tctgtgctcaacaccctgaaagcggacaagtttgtcaagtgccgtatgagagtggagaca
gcacctgatggcaagacaacgcgtcacaactactatttcattaactacagagtgctggtt
aacgttgtaaagtacaaattggatcacatgcgacgccgcattgagacagacgaacgggac
tccaccagccgcgcctccttcaggtgcccctgctgcttctccactttcactgacctggag
gccaatcagctttttgatcatatgactggtatgtttcgctgcaccttttgtcagactgag
gtagaagaagatgaatcggtctgccctgacgccaggacacttgtggcccgctttaatgag
caaatcgagcccatctacgcactcctacgcgaaaccgaagatattaacttgtcccatgac
ctgctggagccggagcccaccgagatccccgctctcaaacagagccgtgaacgagcggca
gctgctgcaggaaatgctgcaggcggaccacaccgcgaagcctggtctaataaaggatcg
acctacgctgatttgtacatccagaatgtagttatcagcatggaggagcaggacgaccaa
aagaagcaggtcaatgagggcaagcccccaaaggagcggcccgtttggctgacgcagagc
acggtgcagggggcttacaacgagccggatgctctcaagagccgtggcgacatcgcagcc
ggagctcaggatggcgcagccggtcacggagcaggccaggcggacgaaaacgaggaagta
atgcgtgccctgctcatccacgagaagagagctgtcgccggagcaggtgtgggtggagcg
agcgcagctgccaggggtcttgcctccgccacagctaacgccagtgactcagagagcgac
accagtgaatcagaggacgaacttccctcgggccctaccactgccacagcctctcagcat
cgcgccgttgaagaggtcgaagaagaggatgacgacgacgactttgaggaggtgggggat
gagccgatggtgatggtggggggtcggccgttctcatacagagaggtgagccagaggccg
gagctagtggagcagatgtctatgcaggaaaaggaggcttacattgagatgggacaaaac
ctcttccaggatatgttcttctga
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integrated database retrieval system
