Xiphophorus couchianus (Monterrey platyfish): 114148804
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Entry
114148804 CDS
T05908
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114148804
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Protocadherins
114148804
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
114148804
NCBI-ProteinID:
XP_027880082
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Position
7:14714590..14732967
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AA seq
1091 aa
AA seq
DB search
MRLSAPVFLLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDGGYGTVERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
LEIPENSPPGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNLPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRETKDEYNVTIVA
RDNGNPSLNNTRSFTVKILDENDNAPRFTKTLYLLQVPENNIPGEYLGSVVAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDSGSPHMES
TSTVRVNVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIIATVKAVDHDHGESGHLTY
EITEGNDDHLFEIDPVGGEVRTAHALWEEIAPVVELVVRVTDHGKPPLSAVAKLIIKANT
ETTTGVGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKDAGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRSGCHSSFAGLNTETQANRMSVIQTENFSSEPNYSGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKAAAVNGQPFEKE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLTTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSGAPPDLASRE
PNEERDGGSDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSCLIHSSVISQEYGGS
DCAPDQRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgcacccgttttccttttgctgtgggtgaaagcactcacgttaaaaaac
ctcaattattccgtcccggaggaacagggacctggaactgttataggcaatatagcaaaa
gacggcggatatgggactgtagagagagggaagaaatccaacttcagggtgctggagaat
tcagccccgcatctggtggatgttgaccccgagagtggactaatcttcaccaaacaaagg
attgacagagagacgctatgtaggcgcaaccccaagtgccagctctctatggaggtgttc
gcaaatgacaaggaaatttgcatgatcaagattgatatacaggacatcaatgacaactcc
cccagtttcccttcagatcatgtgaatattgatatctctgagaatgcagctgctgggaca
cgcttccccctcactattgcacatgactcagattctggggaaaatgggataaagacctat
caggttacaagagatgactacaataccttttctttggatttaaaagtgaggggtgatggg
actatatacccagaactggtggttcagagacccctcgatagggaggatcagagtcatcac
actcttcttcttactgcaatcgatggtggggagtatccgagatcgggctccatgcaaatc
aacgtcagagtgactgattcaaatgacaatagccctgtttttgaaaaatcttcctatgtg
ctagagattcctgagaattctccccctggaaaaatacttatagatctgaacgccactgac
caggatgagggaagcaacgggcaggtggtctattccttcactggatatgcatctgagcga
atacaagatttgttctcaatagacccaaacactggcgtcattaaggtccagggagagatt
gactttgaggagaatccaatcatagagtttgatgtgcaggcaaaggatctggggcccaat
ccgataccaggacattgtaaaattactgtgaaagtacttgacaaaaatgataacctgcca
ataataagttttgtctctgttcggcagggagcaatcagtgaagcagctcctccagagtct
gtcatagcactggtcagagtgactgataaagactcagggcgtaatggccagctccagtgc
cgggttctgggaaatgtccccttcagacttcaggaaaacaatgataatttctacactctc
cttacagacagacctctggacagagaaacgaaagatgaatataatgtcacaattgttgca
agagacaacgggaacccatctttgaacaacactaggtcattcactgtgaaaatcttagat
gagaacgacaatgcgccacgcttcacaaagacactctacttgctgcaggtgcctgagaac
aacatcccgggagagtacttgggctctgtcgtggcacatgatccagatgtaggtcgtaat
ggaactgtttcatactccatactgccatcccacattggagatgtatcagtctacacatac
gtgtctgttaatcccacaaacggagcaatctatgcctctcgctccttcaactatgagcag
acaaaatcctttgagttcaaggttcaagcaaaagacagcggctctcctcacatggagagc
acttctacagtcagggtcaatgtccttgatgtgaatgacaatcttccagttattatttta
cccctgctgcagaatgatacggctgagatcccagtacctagaaacgtgggaattgggtac
attattgctacagtaaaagcagtggaccatgaccatggagaaagtgggcacttaacctat
gagatcacagagggaaacgatgaccacctgtttgagatagacccagtgggaggagaggtc
agaactgcccatgctctctgggaggagattgccccagtggttgagctggtggtgagagta
actgaccatggcaaacctcccttatctgctgtggctaagctgatcattaaggcaaatacg
gaaactacgacaggagtgggttccagcgcgagtggggaacagcagcactgggacgtgtcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcctggccgtcatgactgcc
atcgctgtcaagtccaagcatcaagataaggatgctgggaattataactgccgcatggct
gaatactccaatcctccggtggggaagggaaaaaagaaaaggatcaacaagagtgacatc
atgttggtgcagagtgagatggaggagagggattctgcaagccggatgaatgttgtcagc
agcccatccttgatcacttcacccatatgcttcgactaccagagcccgctgccgctcaca
ctacccaggtcagaggtcatgtacctgaaaaccaccccaaacagcctcactgtgcccagg
tcggggtgccactccagttttgctgggctaaacacagaaactcaagcgaataggatgtca
gtgatacagactgaaaatttctcatcagagcccaattattctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagtctcagagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacatct
gccagggaggccctcaagatgaaagcggcagcagttaatggccagccttttgagaaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacactctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgcagataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
agcagcagaaaaaccctcaccacgtttggaaaagaacagcgggacagtacaatcctcgtg
gccaatgttaaaccttacttaaaatcgcagcgtgcgctaagcccgccactccaagagagt
ccatctgcgtccagcagccccaccaagagcggcgcgcccccggacttggccagccgagag
cccaacgaagagagggacgggggatcagacagcagtgcctatggccctccagatggccag
tgctccccgctgcacactgagctggaggagccctcctacctgacctgtgagctcaggcct
aagtctctgtcaagctgtctcattcacagctctgtcatcagtcaagagtatggggggtcg
gattgtgctcccgaccagagggactctggcaactga
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