Xiphophorus couchianus (Monterrey platyfish): 114148862
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Entry
114148862 CDS
T05908
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114148862 (nyx)
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
114148862 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
114148862
NCBI-ProteinID:
XP_027880152
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Position
7:complement(4247024..4263034)
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AA seq
530 aa
AA seq
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MRGNVDLMLVGNQSDRHRLGAEPTDEAPAFAEKNNILLTKVQPVSSGHSSVHLEQEKFSV
LCLLPQSALARWACVRACPPSCSCTQEKSCSVLCDRAGLAELPREFPCEASAINLEKNRL
KFLSERAFGTLPSLKSLSLDHNNISFITPGAFKGLSNLLELRMAHNEYISYLHTRTFTGL
KKLQRLDLSDCNLFSIPDRVFIEQTAMTELLCFHNNFRRIPGAIRGMENLTHIYLERNKI
EAVAYNSLLGLGTLRYLNLQENRINVIHDNAFQDLVRLENFYLNDNLLSDLPRFAFKGLS
RLKMLNLGGNQLINVSKTWFGDLAELEVLYLDRNQLLSFEEGAFENLTSLITLHLNSNNL
TTLPLSVFQPVYFLGHLYLFKNPWECDCALDWLKQWMESYKLVRDIPCASPSSVVGLDLS
QVVFPTANGTCVDPAELNLTTASSEVQPTTENRFNSLISKLLQQELREEMGNGTEVARNA
TLPELEEGQLSAGVGGRGTQAVQSLLCFMVTWLFCGLFHLPHASLCLRCT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcaacgtcgacctcatgctggtggggaaccagagcgaccgccaccgcctcggg
gccgagcccaccgacgaggctccagccttcgcggagaagaacaatattctgctgacaaaa
gtccagccagtctcctctggacactcgtcggtgcatctggagcaggaaaaattctccgtg
ctgtgcctgctgccccagtcggcgttggcgcggtgggcgtgcgtccgggcctgcccgccg
tcctgctcctgcacgcaggagaagagctgcagcgtgctgtgtgaccgcgccggcctggcc
gagctgcccagagagttcccctgtgaggcgtccgccatcaacctggagaagaaccggctc
aagttcctgtcggagcgggccttcgggaccctgccctcgctcaagtctctgtctctggac
cacaacaacatctccttcatcaccccgggagctttcaagggcctctcgaacctgctggag
ctgagaatggcccacaacgagtacatcagctacctgcacacccggacgttcacagggctg
aagaagctgcagcggctggacctgtccgactgcaacctcttcagcatccccgaccgcgtc
ttcatcgagcagaccgccatgacagagctgctgtgcttccacaacaacttccgcaggatc
ccaggggccatccgggggatggagaacctgacgcacatctacctggagaggaacaagatc
gaggcggtggcctacaactcgctgctgggcctggggaccctcaggtacctgaacctccag
gagaaccgcatcaatgtgatccatgacaacgccttccaggacctggtgcggctggagaac
ttctacctcaacgacaacctgctgtccgacctgccccggttcgccttcaaggggctcagc
cgcctcaagatgctcaacctcgggggcaaccagctgatcaacgtgtccaagacgtggttc
ggtgacttggcggagctggaggtcctgtacctggaccggaaccagctgctgagcttcgag
gagggcgccttcgagaacctgaccagcctgatcacactccacctgaacagcaacaacctg
accacgctgcccctcagcgttttccagcctgtctactttctgggccacctgtacctcttc
aagaacccgtgggagtgcgactgcgccctggactggctcaagcagtggatggagagctac
aagctggtgcgggacatcccgtgcgcctcgccgtcctccgtggtgggcctggacctcagc
caggtggtgttccccacggcgaatggcacgtgcgtcgaccccgccgagctcaacctgacc
acggcgtcctcggaggtgcagcccaccacggagaaccgcttcaacagcctcatctccaag
ctgctgcagcaggagctcagggaggagatggggaacgggaccgaggtcgcgcgcaacgcg
acgctgccggagctggaggagggccagctgtcagcgggcgtcggaggccgagggacgcag
gcggttcaatcgctgctctgcttcatggtgacgtggctcttctgtggtttattccacctg
ccacatgctagtctctgtcttcgctgtacatga
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