Xiphophorus couchianus (Monterrey platyfish): 114148950
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Entry
114148950 CDS
T05908
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114148950
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Protocadherins
114148950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
114148950
NCBI-ProteinID:
XP_027880267
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Position
7:complement(14634489..14638269)
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AA seq
988 aa
AA seq
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MRLLSDGKTSAKMIVTYWHRWIVIVYFHLSLFASRTESEGNTVRYQTREEDAPGTVIGNL
AKDMSLSVSHSSKINFRMMKQFNDSFIRVRESDGQLSVGERIDRERICRHTPQCLITFDV
VNFSKDRYKLIHVEVEIRDVNDNSPEFPNRESLVEISENAALGSRIPLDPAVDADVGSNY
IQSYQISVNSHFTIDVLQRADGVKYAELILMKELDRETQPSYNIELVAKDGGSPYRSGST
KITVRVTDFNDNSPVFDQNSFSVSLPEDAPVGTVILDLNAVDADEGLNGEVVYGFGKQVS
HEIRELFQVDNKSGRVTLRSPVDFEDKSTYELDVQAIDLGANPIPSVCKIIIHVTDVNDN
APEISITPITSIATGVAYISEAAEKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLRQA
HEDSYMIVTAASLDRERISEYNLTVMAEDFGSPPLRKITQFTIRLSDENDNAPHFARAVY
EVSVVENNAPGAYITTAEASDVDLGNNGKITYRLVDSVIMGSPVNTFVSLNSVSGSIYAL
RSFNYEVMKQLDVHIQASDGGSPQLQSTAIIRLKIVDQNDNQPYIVEPPLYKGSAEIFLP
RDAPAGYLVTQIRASDADEGINAQLSFKITDGGHLGFSINKDTGKVLVNRKLTYDLTDSV
KVTVAVSDNGTPPMTSTAMIIFSFIEGTPPSQPSSAQNSNEELFEWDMSVAIIIVLAGSC
SVLLLAIILIATICSRRKKETSEGGYEEKAETPDVEKAESSRMDSLIVNHKGKVFDAHPF
PEGLPLASSNTTETSSEDSRQTTGIFEPNTRPIEAKLKGYSTLPGYGKETVRPITIWKGN
SFTTISARDPQISGKDSGKGDSDFNDSDSDISADVHKKESPPLNSLWACTSECKVLGHSD
RCWSPSASRPNTSLACGPHLSTFSKTATLPRDARRENYYPPHIPKTSGLQSVYEKVQHQE
FDYILVGPPTPARIQETDEISIPEYTNS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaggctactcagcgacgggaagacctctgcaaagatgattgtaacttattggcaccgg
tggattgttatcgtctattttcacctttctttattcgcctctcggactgagtctgaggga
aatacagtgaggtaccagaccagagaggaggacgcaccgggcactgtcatcgggaacctg
gccaaggacatgtccttgagtgtgtcccactcctccaagatcaatttcaggatgatgaaa
caatttaacgactcctttatccgggtgagagaaagcgacgggcaactcagtgtcggggag
cgaatcgacagggagcgaatctgcagacacactccacagtgtctgattacttttgacgtg
gttaatttctccaaagaccgctacaaactgatccatgtcgaggtggaaataagggacgtc
aatgacaactctccggagtttccaaacagggagtctttggtggagatctcagagaacgca
gcgctggggtcccggatccctctggaccccgctgtggacgctgatgtcgggtcaaattac
atacaaagctatcagatttctgtgaacagtcacttcaccatagatgtgctccaaagagcg
gatggggttaaatatgcggagctgatcctgatgaaagagcttgacagggagactcaaccc
tcatataatatagagttggtggcaaaagacggagggagcccctacagatccgggtcaact
aagataactgtgagagtgactgactttaacgacaacagcccagttttcgaccagaacagc
ttctcagtcagcctcccagaggacgcgccggttggcacggtgatcctggacctgaacgca
gtggatgctgacgagggtctgaacggggaggtggtctacgggttcgggaagcaggtttct
cacgagatccgcgaacttttccaagtggataacaaatcgggccgcgtgaccctcaggagt
cccgtggacttcgaggataaaagcacctacgagttggacgtgcaggctatcgatctgggc
gcaaatccgatcccgtccgtgtgcaaaatcataatccacgtcacggacgtgaacgataat
gccccagagatcagcatcaccccgatcacctccatcgccacgggtgttgcgtacattagc
gaggcggcagaaaaagacagcctggtggcgctcatcagcaccctggacagagactctggc
gttaacagccaagtacactgcactttgtatggccacgatcactttaaactccggcaggcc
cacgaggacagctacatgatagtcacagctgcctctctggacagagagaggatcagtgag
tataatttaacagtcatggctgaggatttcgggtcacccccgctgagaaaaatcacccag
ttcaccatcaggctgagcgatgagaacgataacgccccccactttgcgagggccgtttat
gaggtgtcagtggtggaaaacaacgccccaggcgcctacatcactacggcggaggccagc
gacgtggatctgggtaacaacgggaagatcacctacaggcttgtggacagtgtcatcatg
gggtccccggtgaacacctttgtgtctctcaactccgtgtctggctccatatatgcgctg
aggagcttcaattatgaagtgatgaaacagctggatgtacatattcaggctagcgatggg
gggtcaccccaactgcagagcacagccatcatcaggttaaaaatagttgatcaaaatgac
aaccagccttatattgtagagcctccactctacaaggggtcggctgagattttcctgccc
agagatgcacctgcaggttacttggtgactcagatcagggccagtgatgctgatgagggc
attaatgcacagctgtcctttaagattacagatggggggcacttaggattctccatcaac
aaggacactggaaaggtgctagtgaatcgaaagctcacgtatgacctcacggacagtgtt
aaagtcacggtggcggtcagtgacaatgggaccccccctatgacgtccacagccatgatt
atttttagtttcatagaaggcaccccgcccagccagccttcctcagctcaaaatagcaac
gaggagctcttcgagtgggacatgtccgtcgccataatcattgtcctggctggaagctgc
tctgttctcctgctggctatcattctcattgcaaccatctgtagccgcaggaaaaaggag
acaagcgaggggggttatgaagagaaagcagaaacacccgatgtggagaaagctgaaagt
agtcgtatggattcattgatcgtcaatcacaaaggcaaagtatttgatgcccacccattt
ccagagggtctgcctctggccagcagcaacacaacagagaccagcagtgaggacagcagg
cagacaacaggaatctttgagccaaacaccaggccaatagaagctaagttaaagggttat
tccacactgccagggtatgggaaagaaactgtgaggcctataacaatatggaaaggcaac
tcgttcacgactatctcagcaagggacccccagattagcgggaaagacagtgggaaaggg
gacagcgacttcaacgacagcgactctgacatcagtgcagacgtccacaaaaaggaatca
ccaccattgaacagtctctgggcgtgcaccagtgaatgcaaagtgctaggacactctgac
cgctgctggagcccatcagccagtaggcctaatacaagcttggcctgcggacctcacctg
tcgacattctccaagactgccacgcttccccgggatgccaggagggaaaactactacccg
ccccatatcccaaaaaccagtggtctgcagagtgtgtatgaaaaggtccaacaccaggag
tttgattacatccttgtcggtccacctacaccagccaggatacaggaaacggatgaaata
tccatccccgagtacacaaactcttaa
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