Xiphophorus couchianus (Monterrey platyfish): 114149040
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Entry
114149040 CDS
T05908
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8 isoform X1
KO
K09293
paired box protein 8
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114149040 (pax8)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
114149040 (pax8)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
114149040
NCBI-ProteinID:
XP_027880388
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Position
8:16233758..16249204
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AA seq
469 aa
AA seq
DB search
MSGGTGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKI
LGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDT
VPSVSSINRIIRTKVQQPFNLPLDGKGLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGL
LGIPPPNTDGKRSHDDSDQESCRHSVDSQGSAGVPRKQMRVEHFSTAAQHLDCGFDRHHY
PSDSFSSTSSSKAEQTLYPLSLINGSLDEAKTSLSSSSSVIGRNLSAHPSYTVVTEPLQT
LPLCLKQEMSPEVTSTSPSPNMVASTLAYVELQALQKPVSVSSSCNGTSSSSSSNSYPNA
FNSFSHHAPMYGQFSSQSIMSGRDMVSSTLPGYPPHIPSPAQTGYSSSAITGMVAAGADY
SGQSYGHSPYTSYSEAWRFTNSSILGSPYYYSSASRTGPPSAAAAYDHL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggcactggaagaggccatgggggtcttaaccaactaggtggaatgtttgtt
aatggccgcccgcttccggaagttatccggcaacgcatcgtagacatggcccaccagggg
gtccgaccctgcgacatatcccggcagctccgggtcagccacggctgcgtcagcaagatc
ctgggacgatattatgaaacaggcagcatcaaaccaggggtaattggtggctctaaaccc
aaggtggccaccccgaaggttgtggagaagatcgcagagtacaagaggcaaaatcccacc
atgtttgcctgggaaatcagagatcgactgctggcggaaggggtgtgtgacagcgacacg
gtgcccagtgtgagctccattaacagaataattcgaactaaagttcaacaaccttttaat
ctcccactggatggaaaaggtctgagtccaggacataccttaattccaagctcagccgtc
acccctccagagtcgcctcagtcagactctttgggctccacttactccatcaacggcttg
ttaggaatccccccaccaaatacagacggcaagaggagccatgatgacagtgaccaggag
agctgtcggcacagtgtggactcccagggcagcgcaggcgtcccgagaaaacagatgaga
gtggagcacttctccacagccgcacaacatctggactgtgggtttgatcgtcaccactac
ccgtcggattccttcagctccacctcaagcagcaaggcagagcagactttgtacccgctg
tcgctcatcaacggcagtctggacgaggccaagaccagcctctcatcaagcagctctgtc
attggtcgaaatctgtcagcacacccaagctacactgtagtaaccgagccccttcagact
ctgccgctctgtctgaagcaggaaatgtccccagaagtgaccagtacaagcccctcacca
aatatggtggcatccaccctggcgtacgtggagctgcaggcgctgcagaaacctgtttct
gtcagcagcagctgcaacggcaccagcagcagcagcagctccaactcatatcccaatgcc
ttcaactcattttcccatcatgcaccgatgtacgggcagttcagcagtcagtctattatg
tcagggcgtgatatggtgagctccaccctgccaggttacccacctcacatcccctccccg
gcccagacaggatactcctcctctgctatcacaggaatggtcgcagcaggtgcagactac
tcgggtcagtcctacggccattcgccctacacctcctacagcgaagcctggaggttcacc
aactccagcatattgggctccccctactactacagctcggcctcccgcacaggtcccccc
tctgcagccgccgcctatgaccacctctag
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