Xiphophorus couchianus (Monterrey platyfish): 114149118
Help
Entry
114149118 CDS
T05908
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114149118 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114149118 (dcp2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
114149118 (dcp2)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114149118 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
114149118 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
114149118
NCBI-ProteinID:
XP_027880505
LinkDB
All DBs
Position
8:28306012..28323150
Genome browser
AA seq
395 aa
AA seq
DB search
MFSASMETKRVEIPTSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCIQNTP
GAPQCGIRDFAKAVFHHCPFLLPHGEDVQKVLEEWKEYKMGVPTYGAIILDESLENALLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNRICKDVYIEQKITDQLVRLY
IIPGVSKDTKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPL
REWINRLKGESDSDEELANNRMTPSKPLDGIRSKSRNNDVYPGEGWNKHKQQRTPGQTNQ
NDPNQKLVLKSSGKKRQDSPCVKRGTGENGSNNQQKEDKRTHPRRLQDMFERDMAISSSS
CHLSSGDKDFEQLVSSKAFLNFKFDRDAIMKCFDY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagccagcatggaaaccaaaagagtggaaattcccaccagcgtactagacgat
ctgtgcagccggttcatcctccacatccccagcgaggagcgggacaacgctattcgtgtg
tgtttccagattgagctggctcactggttttatctggacttctgcattcaaaacactcca
ggagcgcctcagtgtggaatcagagactttgccaaagctgttttccatcattgtccattt
ctgctgccacatggagaggatgtgcagaaggttctggaggaatggaaggagtacaagatg
ggtgtacccacatatggggcaattattctagatgaatcactggagaatgcgctgcttgtt
cagggctacctggccaagtctggctggggttttccaaaggggaaagtgaatgaggatgaa
gctcctcatgactgtgcagttcgtgaagtgctggaggagacaggttttgatatcaagaac
cgcatctgcaaagacgtgtacatcgaacagaagataactgaccagttggtgcgactctat
atcatcccaggagtatccaaggatacaaagttcaaccccaaaacacggaaagagatcagg
aacattgaatggttccctattgagaagctgccctgccacaggaatgacatgaccccaaag
tctaaactgggactagcacccaatcgatttttcatggccattccattcatcagaccgctg
cgtgaatggattaacagactcaagggtgaatcagatagtgatgaggagctggcgaacaac
aggatgactccatccaaacctttagatggcattcggtcaaagagccgaaacaatgacgta
tatccaggagagggttggaacaaacataagcagcagaggactccggggcagacgaaccag
aatgatcccaaccagaaactggttttgaaaagcagtggcaaaaaaagacaggactctcct
tgtgtaaagagaggaaccggtgaaaatggatccaataaccagcagaaagaggacaaacgg
actcatcccagacgacttcaagatatgtttgaaagagacatggccataagcagttccagt
tgccatttatcatctggagacaaagactttgagcagttggtttcctccaaggctttcctg
aatttcaaatttgacagagacgccatcatgaaatgttttgattactga
DBGET
integrated database retrieval system
