Xiphophorus couchianus (Monterrey platyfish): 114149174
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Entry
114149174 CDS
T05908
Symbol
prdm12
Name
(RefSeq) PR domain zinc finger protein 12
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114149174 (prdm12)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114149174 (prdm12)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_2
zf-met
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-Di19
CBM_3
DUF7066
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
114149174
NCBI-ProteinID:
XP_027880621
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All DBs
Position
8:complement(16373646..16377733)
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AA seq
375 aa
AA seq
DB search
MGSVLPADALALKPGFKCSGRSLSDVITSDILHSFLYGRWRNVLGEHLAEERQSGSSPKT
AFTAEVLAQSFAGEVQKLSSLVLPSEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRL
LSPEHVDLFKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIG
SSIFYKAVETIPPDQELLVWYGNTHNTFLGIPGVPGMDEEHQKKSRNDDSHSTEGPSSCS
PPSVAVTSTGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVR
LHTGERPYKCHVCQSAYSQLAGLRAHQKSARHKPVAQASDAPPQVSPPPPPPPAPQMAAM
QHQMPLVHHIPTMVL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtgctgcccgccgacgctctggctctgaagcccggatttaagtgctccggc
cgctcgctgtcggacgtgatcacctcggacatcctgcacagcttcctgtacggcaggtgg
aggaacgtgctgggcgaacacctggcggaggagcggcagagcggcagcagccccaagacc
gccttcacggcggaggttctggcccagtccttcgctggagaggtgcagaagctctccagc
ctggtgcttcccagcgaggtgatcatcgcccagagctccatcccgggagaaggcctgggg
atcttctccaagacctggatcaaagccggaacagagatgggccccttcaccgggagactc
ctgtcccccgaacacgtggacttgttcaagaacaacaacctgatgtgggaggtgttcaat
gaggacggcacggtgcggtacttcatcgatgccagccaggaggaccaccgcagctggatg
acctacataaagtgtgctcggaacgagcaggagcagaacctggaggtggtgcagatcggc
agcagcatcttctataaagcagtggagaccattccgcctgaccaggagctccttgtctgg
tatggaaacacgcacaacacattcctgggaatccctggagttcctgggatggacgaagaa
caccagaagaaaagcaggaatgacgactcccactccaccgaggggccctcttcgtgttct
cctccttccgtcgccgtcacctccacgggccggatgcgctgcgtcatctgccaccgcggc
ttcaactcccgcagcaacctgcgctcccacatgcgcatccacaccctggacaagcccttc
gtgtgccgcttctgcaaccgccgcttcagccagtcgtccacgctgcggaaccacgtccgc
ctgcacaccggcgagcggccgtacaagtgccacgtctgtcagagcgcgtactcccagctg
gcgggcctgagggcgcaccagaagagcgcacggcacaaacctgtggcgcaagcctccgac
gcgcccccgcaggtttcccctccccctcctcctccacctgcgccgcagatggccgccatg
cagcatcagatgcctctggtccaccacattcccaccatggtgttatga
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