Xiphophorus couchianus (Monterrey platyfish): 114149232
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Entry
114149232 CDS
T05908
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114149232 (erbin)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_13
PDZ_6
LRR_5
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
114149232
NCBI-ProteinID:
XP_027880694
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All DBs
Position
8:23436675..23499373
Genome browser
AA seq
1328 aa
AA seq
DB search
MSKRSFFVRLVPCRCLRGEEEVVTSLDYSHCSLETVPKEIFGFEKTLQELYLDANQIEEL
PKQLFNCQFLNRLSMPDNDVTVLPAAIANLVNLRELDVSKNSIQEFPENIKNCKILTVVE
ASVNPISKLPEGFTQLMSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQ
KLTQLERLDLGSNEFTEVPEVLENLNGLKELWMDGNKLTFLPGMLGMLKQLVYLDVSKNN
LEMVDEKLSGCENLQDLLLSNNTLTQLPGSIGSFKKLTTLKVDENQLMYLPDSIGGLTSI
DELDCSFNEIEALPASIGQCVSIRTFAADHNFLSQLPPELGSWKSATVLFLHSNKLESLP
EEMGDMQKLKVINLSNNKLKNLPYSFTKLNEMTAMWLSENQSKPLIPLQKEEDPETHKTV
LTNYMFPQHAEDFIPSSDSENFNPALWEEQRKQRAQVAFECDEDKDERETPPREGHLKRY
PTPYPDELKNMVKTAQSVAHRLKEDETSDESGKESKPVERNHIGVQDVGVKVIEGPFPNG
VASDIDAPVSSTCPQSSSATESRETSEPFSSQNIPLKSSEGSMMNHEDTLEDTEELSEEE
EMKIAEMRPPLIEISINQPKVVTLSKDKKDDADSLLDDTVANSNQNNSNCSSPSRMSDSV
SLTTDSSQDNSLCTPERESKMPFLPKSRQDDENMNQPKDTTPLLHNGNGSEPLLQTLLKT
QQTPPDYDLSMEAYIEKGVTNGMGDAYTKWDQINMNVTKLPPYHAAQFNKLDKVKNGSVN
DCNDFQNGNQQGSDCINSLVNRSQGTRAETSASSGVAASSDMSLSRSTEELSPEKRCPLP
SQVTKSHSVSNIEAGGMKLYSFDGDDEAAAAAAGRIVPGPGAQGQNIVRSKSASQLLNDQ
NLLVYPGSLSSSSDLLSSSKPPVSTSRYLGSSSMSMGVPPPQYNIQYASSAVPKDDLWAQ
RDHQGYLPPHPHSLANTNYSNRNQAPPYTLQPQQRGVPMAPMGDWTKERLHSAGGPPRSS
TLQRQGSSASSVSMGDPKRVQAPEGEYMTYRDIHTLARGPLAMSQAMQRPFSARTYSIDA
PIASRPVAARPPPHELPERTMSVSDFSYQQSSPSKRPNTRVKSEHSLLDGPGQVSGGMGP
GRVPTDWRDQVMRHIEAKKMEKDDVFVPQGPQSYTMDPHRKVPLMNGQMGPSGRPQMSQS
SMARHPSREQLIDYLMLKVSQQPHGPPRVPHDTLQQEIRVKVEKNPELGFSISGGVGGRG
NPFRPEDNGIFVTRVQPEGPASKILQPGDKIIQANGYSFVNIDHGNAVSLLKMFPTTVDL
TIVREVQA
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggagcttctttgttcggctggtgccgtgccggtgcttgcgaggtgaggag
gaggtggtgacatctctggactactcccactgcagcctggagacggttcctaaggagatc
ttcggcttcgagaagacgctgcaggagctctacctcgatgccaaccagatcgaggaactg
cctaaacaactgtttaactgccagtttctcaaccggctgagcatgccagataatgacgta
acggtgttgcccgcagcgatcgcaaatctcgttaacctcagggagcttgatgtcagcaaa
aacagtatccaagagtttccagaaaacatcaagaactgcaaaatccttactgttgtagaa
gccagtgtgaatcctatttccaagctcccagagggtttcactcagctcatgagtctgacg
cagctctacctgaatgatgccttccttgagtttttaccagcctcgtttggcaggctgacg
aagctgcagatactggagttgagggagaaccagttaaagatgctgccaaagagcatgcag
aagctcacacagctggagaggttggacctggggagtaatgagttcactgaagtgcctgag
gtgttggagaatctgaatggactcaaggagctgtggatggatgggaacaaactgactttt
cttcctgggatgctggggatgctgaaacagctggtttatctggatgtgtcgaagaacaac
ttggaaatggtggatgaaaaactctccggctgtgagaacctgcaggacctcctgctctca
aacaataccctcacacagctgcccggctccattggctctttcaagaaactgacgacgctg
aaggtggacgaaaaccagctgatgtatttgccggactccatcggaggactgacatccatc
gacgagctggactgcagtttcaacgagatcgaagccttgcccgcgtccatcggccagtgt
gtcagcattcgcacttttgccgctgatcacaacttcctctcccagcttccccctgagctg
ggcagctggaagagcgcgacggtgctgtttctgcattccaacaagctggagtctttgccc
gaggagatgggcgacatgcagaagctcaaagtcatcaatctgagcaacaacaagttaaag
aatcttccttacagtttcactaaactcaatgagatgactgcaatgtggctgtctgagaac
cagtcaaagcccctgatccccctccagaaagaagaggatccggagacccataaaaccgtg
ctgaccaattacatgttcccccagcatgcagaggactttatccctagcagcgactctgaa
aacttcaatccggctctctgggaggagcagcgcaagcagcgagctcaggtggccttcgag
tgcgacgaggacaaggatgagagagaaacaccgccaagggagggacacctaaaacgctac
ccgacgccttacccagacgagctgaagaacatggttaaaacggcccagtctgtggctcac
aggctgaaggaggatgaaacgagtgacgagtctgggaaggaatccaaaccagtggagagg
aaccacattggagttcaggacgtgggagttaaggtgatcgaaggcccctttcccaacggt
gtggcatcagacatcgacgctccagtctcttccacttgtccccaaagttcttctgcaact
gaatccagagaaacgtccgagcccttcagctcccagaacattcccctcaaatcttctgaa
ggttcaatgatgaaccatgaggacacactggaggacaccgaggagctttcagaggaagag
gagatgaaaatagcagagatgagacccccacttattgagatttccatcaatcagcctaaa
gtagtgactctaagtaaggataaaaaagatgatgctgattctttgctggacgacaccgta
gccaacagcaaccagaacaacagcaactgctcgtcgccatcgcggatgtcggactctgtg
tctttgaccaccgacagcagtcaggacaactctctgtgcacgccagagagggagtccaag
atgcctttccttccaaaaagcagacaagacgacgagaatatgaatcagccaaaagacacc
acccctctcctccacaatggtaatggctccgaaccgttgctccagaccctgttaaaaacc
cagcagaccccaccggactacgacctgtctatggaagcctacattgagaagggggtaacc
aacgggatgggggacgcctataccaagtgggaccagatcaatatgaacgtgaccaagctg
ccgccgtaccacgcagcgcagttcaacaagctggacaaagtaaagaacggctcggtcaat
gactgcaacgacttccagaacgggaaccagcaggggagcgactgcatcaacagcctggtg
aacagaagccaagggacgagagcggagacgtccgcctcgtcgggcgtggccgccagcagc
gacatgtcgttgtctcgcagcaccgaggagctgtctccggaaaaacgatgtcccctgccg
tcgcaggtgacaaagtcccacagcgtcagcaatatagaagcaggtgggatgaagttgtac
tcgtttgatggggacgacgaggctgccgcagcagcggcaggtagaatcgtcccgggtccg
ggagctcagggtcagaacatcgtccggagcaaatcagccagtcagctactcaacgaccag
aatctgctggtctaccccggctctttatcgtcttcctctgacctgctgtcatcctctaag
cctccggtcagcactagcagatatctggggtcgtccagcatgagcatgggggtccctccc
cctcaatataacatccagtacgcaagcagtgctgtgcctaaagacgacctctgggctcag
cgggaccaccaaggctacctcccacctcatccacactcccttgccaacaccaactactca
aaccgtaaccaggcacctccgtatactctacagccccagcagaggggcgttcctatggcc
cccatgggagactggaccaaggagaggcttcattctgccggcgggccacctcgaagcagc
actctgcagcggcaaggcagctccgcctcctcagtctccatgggcgacccaaagcgcgtc
caagctcccgagggggagtacatgacctacagggacatccacaccctcgccagggggcca
ctggcgatgagccaggccatgcagaggcccttctctgctcgcacgtacagcatcgacgca
cccatcgcttccaggcccgtcgccgccaggcccccgccccacgagcttccagaaaggacc
atgtccgttagtgatttcagctaccagcaaagcagccccagcaagcggcccaacaccaga
gtaaagtctgagcactcgcttctcgacggaccgggtcaggtgtcgggagggatgggacca
gggagggtgccgactgactggcgagaccaagtgatgcggcacattgaagccaagaaaatg
gagaaggatgatgttttcgttccccaagggccacaaagctacaccatggacccccacaga
aaagtgcctttgatgaatggtcagatgggcccttctggtcgtcctcagatgagccagagc
tcaatggctcgtcacccttccagagagcagctcatcgattatctgatgctcaaagtctcc
cagcagccccacgggcctccgcgcgttcctcacgacacgctacagcaagagatccgtgtg
aaagtggagaagaatccggagctgggtttcagtatatcgggcggagtgggaggccgggga
aaccccttccgtcccgaggataatggcatttttgtgactcgagttcaacctgaggggcca
gcgtccaaaatccttcaacctggagataaaataattcaggcaaatggatacagctttgtg
aacatcgatcacgggaatgcagtgtccctgctcaagatgtttccaaccactgtggattta
acgatcgtaagagaagtgcaagcgtag
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integrated database retrieval system
