Xiphophorus couchianus (Monterrey platyfish): 114149240
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Entry
114149240 CDS
T05908
Symbol
fbh1
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114149240 (fbh1)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114149240 (fbh1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114149240 (fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
Viral_helicase1
AAA_19
F-box
F-box-like
AAA_30
PhoH
ResIII
AAA_22
AAA_12
Motif
Other DBs
NCBI-GeneID:
114149240
NCBI-ProteinID:
XP_027880715
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All DBs
Position
8:complement(25350114..25369268)
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AA seq
1056 aa
AA seq
DB search
MEKAVKGRAKRKHLNAQECDELGRSEDGTDALTRRNAARGRRDPNWGLYPRTPTKQRRKG
PFVLGSPSVQQKAIHDFFSVTKVISSSPHKSSAVPSTSTHRAGSGVVFEDDEEDDDVSLL
ATPTEAEINAEDEDEIDDDSLLAAEMLPEKVSSAEARLLEADYLEGMTAEMFGDDEDFDD
FEEEEGEVEPLPDAHFGLLSSDKVLLRPQGCVDDLPEEVLREVLCLVPAADLYRNVCLVC
HRWRNIVLDPKFVPFKKQYFRYMMKEKETVLEVCSTLKNNNITYPAPSEHSIRNLVVLMA
QHKVGERVKPDDVLSCVNKHRLFPQAEAAITLRIPDIRKFLHLGIEGPNPYAVMAVILVL
SESVSDVQSLVSLLSGCMSLTTITEYLSHVAMMLLALERNRIKIGYRLHYNIYYVLYLLE
NGPFSTNSKQDGLPQIHLTREQQEILSHDIQDDHVVKIVAFAGTGKTTTLVRYAAQRPHL
RFLYVAFNNSVASEARRRFPPNVDCKTAHSLAYNDVGRRYKTHEKLTFNVKPFSINMVLT
PGAGGYSRAKVVATVLNAFMASADQTIGPQHVPYDYAVSKGRRNIIEPDEKRFFIAEAKS
IWNKMKDVREKSKQAYYMPHDGYLKLWQLRDPKPCLTDRYDAIFIDEAQDCTPAIMDVLL
AQRCGKILVGDPHQQIYTFKGAVNALNAVHHTHIFYLTQSFRFGAEIAFVGAAILKVCKG
VKKILVGGMQKSGVCDETAENAVEAMKKGESCSRGKIGVLSRCNLGVFKGAVQLTDANQQ
CRIHFIGGVKNIGLEKIMDIYHLMTQAGQESKKRAIKDPLIRTFFSSKENPYLTFKKYII
QTEDKELDGKLSIVEHYRERIPELVARLKACSEADFHRADFIVGTVHKAKGLEFDTVIVT
DDFATVPASGHNLCRIQDFCFSKIPDDEWNLLYVAVTRAMSSLVITKNILRILTVAGEYF
LKSKMPSSLAAGGGPLPCSISECPNCVTPGSAFVMARQKMQCTECVTEEGPLCERCVWTR
IGPTAFLMTDDVLSMAEIPQQLHVPIHHPFFLELFF
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggctgttaaagggagagccaaacggaagcacctgaatgcgcaggaatgtgac
gaactggggcgaagcgaagacggcacagatgctctcaccagacgcaacgcagcgcggggc
aggcgagaccccaactggggcctttaccccagaacccccacaaagcaacggcggaaaggt
ccgtttgttttaggaagtccatctgtgcagcagaaggccattcatgactttttctccgta
acaaaagttatcagctccagtccgcacaaatcctccgccgtgccctccacatcaacgcac
agagcggggtcgggggtcgtattcgaggatgacgaggaggacgacgacgttagcttgttg
gccaccccgactgaagccgagatcaacgctgaggacgaggacgagattgacgacgacagt
ctgttagctgctgaaatgttgccagagaaggtttcctctgccgaggcccgtctgctagag
gccgactatctggagggaatgacggcggagatgttcggagatgacgaggactttgacgac
ttcgaggaggaggaaggagaggtggagcctcttcctgatgcccactttggactcctgagc
agcgacaaggttctgctgcgcccacagggctgcgtggacgacctcccggaggaggtgctg
agggaggtgctgtgtctggttcctgccgccgacctttatcgcaacgtctgcctggtgtgt
catcgctggaggaacatcgttctggacccgaagtttgtgcctttcaagaagcaatacttc
cgctacatgatgaaagagaaagagaccgtgctggaggtctgctccactctgaaaaacaac
aacatcacctaccctgcaccttcagagcacagcatccgaaacctcgtggtgctaatggct
cagcataaagttggcgagcgtgtgaagccagacgacgtcctgagctgcgtaaacaaacac
cggctcttccctcaggccgaagccgccatcacgctacgcattcctgacatccgaaagttt
ctccaccttggcattgagggccccaacccgtacgcagtcatggcggtcatattggtcctg
agtgagagcgtgagcgacgtgcagtccttggtctctctgctctccggctgcatgtcgcta
accaccatcacagagtatctgagccacgtggccatgatgctgctggctttggagaggaac
agaatcaagattggctacaggttacactacaacatctactacgttctttacttgctggaa
aacggtccattttctaccaattctaagcaggatggactccctcagattcatctcacgaga
gaacagcaggagatcctgagccacgacatccaggacgaccatgtggtcaagatagtagcg
tttgcaggcacggggaagacgaccacattggtgagatacgccgctcagcgtccgcacctc
cgcttcctctacgtggcgtttaacaactcggtggcctccgaggcccgacggcgcttccct
cccaacgtggactgcaagacggcccactccttggcctacaacgacgtcgggaggagatat
aaaactcacgagaagctcaccttcaacgtgaagccgttctccatcaacatggtcctgact
cctggagccggaggctacagcagggccaaggtggtggccaccgtcctgaatgccttcatg
gcctcggcggaccaaaccatcgggccccagcacgtcccctacgactacgcagtcagcaag
ggccgcaggaatatcatagagcccgacgagaagaggttttttatcgctgaggcaaagagc
atctggaacaaaatgaaggacgtcagagagaaatcgaagcaggcctattacatgcctcac
gacggttacctgaagctgtggcagctcagagacccgaagccctgcctgacggatcgatac
gacgccatttttattgacgaggctcaggactgcacgccagccatcatggacgtgctgctg
gcccaacgctgtgggaagatcctggtgggagacccccaccagcagatctacacctttaaa
ggagcagtcaacgccctgaacgcagttcaccatacacacatcttctacctcactcagagc
tttcggttcggagcggagatcgccttcgtgggcgcagccatcctgaaagtctgcaagggg
gtcaagaagattctggttggaggaatgcagaaaagtggtgtgtgtgatgagacggcagag
aacgccgtggaggccatgaagaagggcgagagctgcagccgggggaagatcggcgtcctc
tctcggtgtaacctgggcgtctttaagggcgccgtccagcttacggacgccaaccagcag
tgccggatccacttcatcggcggagtgaaaaacattgggctggagaagatcatggacatc
taccacctgatgactcaggcggggcaggaatccaaaaaaagagccatcaaagaccccctc
atccggacgtttttctcaagcaaggagaacccctacttgacctttaagaagtacatcatc
caaaccgaagacaaggagctggacgggaagctcagcatcgtggagcattacagagagcgc
atcccggagctggtggcccgactcaaggcgtgctccgaggccgacttccaccgagcagac
tttattgttggaactgtccacaaggccaaaggtctggagtttgacactgtgatcgtcacc
gacgacttcgccacagttcccgcttccggccacaacctgtgccgcattcaagacttctgt
ttttctaagattccagacgatgagtggaacctgctgtatgtggcggtgactcgcgccatg
tcctccctggttataactaaaaacatcctccgcattctcactgtggctggggaatacttc
ctcaagtcgaagatgcccagctctctggcggcgggcggcggccctctaccgtgctccatc
tctgaatgtcccaactgcgtcactcctggctcggcgttcgtcatggccagacaaaagatg
cagtgtaccgaatgcgtgactgaggagggcccgctgtgtgagcggtgcgtgtggacccgc
atcgggcccacggccttcctcatgaccgacgacgtcctctccatggcggaaatcccacag
cagctccacgtccccatccaccatccgtttttcctggagctatttttttga
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integrated database retrieval system
