Xiphophorus couchianus (Monterrey platyfish): 114149294
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Entry
114149294 CDS
T05908
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114149294 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114149294 (trim32)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114149294 (trim32)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114149294 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-B_box
zf-C3HC4_2
Baculo_IE-1
Vgb_lyase
zf-C3HC4_4
zf-RING_4
TEN_NHL
zf-RING_11
DUF2203
OmpH
Motif
Other DBs
NCBI-GeneID:
114149294
NCBI-ProteinID:
XP_027880832
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All DBs
Position
8:16936798..16944976
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AA seq
679 aa
AA seq
DB search
MAAACSSLDPDLMREVLECPICLETYNQDKLRPKLLQCGHTVCRLCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKIIDCTLTCSAAATALMCKSCGNRLPRQFCYDCTTVLC
EVCKADGHLHEGHSVQPIKVAAEQRRKELSGRLAALRDVMGNIQKKKTTLENISKSLRQK
YRAVQQEYSSAELHLQEELSKSRRTFTASLGEVEKLNAQVLEEQTYLLNLAEVKVVSRCD
YLTVRVRQSDIALLKDDGAGSDDEELDLRSSLPTQFQLQEPTLARAEHSNPIEVGCLTTN
TYTVNTDDEKGGLETMLEFKAEDAPSGATGGSVMVPGDLYRDVDMVSAVDETVCGSPSSF
KSKSMDAGGESAGASSRPPVCQFVKKMGCKGALPGMFNLPISICVSPQGDILVADRGNCR
VQIFNRKGVPREIRRNASIDNFVLSFFGADLPNLIPLSIAVTPQGLIGVTDNYDNSVKVY
TMDGHYVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRNVGVVSYNRLCSAVR
PKFVTCDAAGTVYFTQGLALNFEKRQNEPHFEGGFSIGSVGTDGQLGKQLSHFFSETEDF
RCITGMCVDANGDLLVTDSGRKEILQFPKEGGFNILIQEGLTCPVGVATTQKGQLLVLDC
WDHCVKVFTYVQRRHSSTS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcatgctcttctctggacccggacctaatgagggaggttctcgaatgcccc
atctgcctggagacttacaaccaggataaactcagacccaaactcctgcagtgtgggcac
actgtgtgtcgactttgtctggagaaactgttggctaataccatcaatggtgtccgctgc
cccttctgcagcaaggtctccaggatgagcagcatctcccagctggcagataatcttaca
gtactgaaaataatagattgcactttgacctgcagtgctgctgccacggcactaatgtgc
aagtcctgcggcaaccggctaccaagacagttctgctatgactgcaccacagttctctgt
gaggtctgtaaagcggatggccacctgcatgaaggccattcagttcagccaataaaagtg
gcagctgagcagcgccgtaaagaactgagtggtagactggctgccctccgtgacgttatg
ggcaatattcagaagaaaaagacaacacttgaaaacatttccaagagcttgagacaaaag
taccgggcggttcagcaagagtattcttcggcagaacttcatcttcaggaagagctcagc
aaatctcgaaggacattcacagcctctttgggagaagtggaaaaactcaatgcacaggtt
cttgaggagcagacatatcttcttaacctcgcagaggtaaaagtggtttcacgttgcgat
tatctgactgtaagggtaagacagagtgacattgccttattaaaggacgatggcgcagga
agtgatgatgaagagctggacctcagaagcagtttacccacacagttccagctacaagag
ccaacactagccagagcagaacactctaatcccatagaagtgggctgtttgaccacaaac
acttacacagtcaatacagatgatgagaaaggtgggttagaaacaatgttggagtttaaa
gcagaggatgcgccctctggcgctacaggtggttctgtaatggttccaggggatctttac
cgtgatgttgacatggtttcagcagtagatgagacagtatgtggttcaccaagtagcttt
aagtcaaagtccatggatgcaggtggggaatctgcgggggctagttccaggccaccagta
tgccagtttgtaaagaagatgggctgtaaaggagcgctgcctggaatgtttaatttaccc
attagcatttgtgtttcaccacaaggtgatatactggtggccgatcgagggaactgccgt
gtccagattttcaatcgtaaaggtgtcccgcgcgaaatccgacgcaatgcaagcatagac
aactttgttctgagcttctttggtgctgacctgcctaaccttatcccgttatccatagct
gtgactcctcaaggtctgattggtgttactgacaactacgataattcagttaaagtctac
accatggatgggcattatgtggcctgccataaaaaccagctgattaaaccctggggaatt
actgccatgccatcaggtcagtttgtggtgtcagacgtggaaggggggaaactgtggtgc
cttgcagtggaccgcaatgtaggtgtagtcagctataaccgattgtgctctgctgtccgg
ccaaagtttgtgacatgtgatgcagcaggaaccgtgtactttacccaaggcctggccctg
aacttcgaaaagcgccagaacgagccccacttcgaaggaggcttctccattggctcagtg
ggtaccgatggccagctggggaaacagctcagccactttttctccgaaacagaggacttc
cgctgcatcactggcatgtgtgtggatgccaacggtgatttgctggtcaccgatagtggc
aggaaagaaattcttcagtttcccaaagaaggaggatttaacattctgatccaagaagga
ctgacctgtcccgtaggagtggccaccacccagaaaggacagctgctagtgcttgattgc
tgggaccactgtgtcaaagtctttacatacgtccaaaggaggcattcttcaacttcctag
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