Xiphophorus couchianus (Monterrey platyfish): 114149350
Help
Entry
114149350 CDS
T05908
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114149350
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114149350
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114149350
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
Others
114149350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
114149350
NCBI-ProteinID:
XP_027880949
LinkDB
All DBs
Position
8:complement(19792360..19828716)
Genome browser
AA seq
2425 aa
AA seq
DB search
MPSKQKKSTALEETEEVDDEVEETEPNLKESGQGLTHGDATKRGKSRRKHKSTERSETQE
PPEKEKKEKEGDKVKKKKKKPNDDADPEAEATVSSKDAEGEQNNNEATTKPRKDKSERLK
EEVTEGKKKQKKKSSVEIPEGEEGMGSKDKKSKNGKKKKKSHDDDGEEPLIEEDEEEEED
SKKKKKKKAKKSSGDSDDDKKKKGKKSKSKQVDYALIYQNELFNYHTDSSDGYEDEYYKK
KVYEVVTVTGDVKGAGTDANVFVTLFGDFGVSPKVHLASNTEKRSRNAFEKNKTDVFRIK
TQNIGPIKKLRIEHDNTGMSASWFLDRVVVTDMIRPHLRFYFPCNNWLSREEGDNLFVRD
LLGSLNPMDVPKLNKYLVSVFTADMKGSGTDADVFLNIFGEHGDTGERRLDSDKDNFERG
SEDKFTIEAPNLGRLRKITIGHNNRGSSAGWFLDKVMIDDMGNKEIYEFPVNRWFAMDED
DGKIQRDILVGSMQPMGIIYNVQVMTGDIRGAGTNSKIHMVMHGSKGLKNSGKIFLEGGA
FERALIDTFNVEICELISPLSRVTIGHDNGAVGAGWYCEKVVIYCPFTGIEQTFPCGMWL
DEDEGDGLIERELYEMVSLRQKKQKKYPWSLWIWTSDIKGAGTDAQVFLQIYGEKGKSDE
IKLENNSDSFEQGQLDKFMIEMPDMGRLLKLRIWHEKRNPFAGWHLAKVTLLKTLTMDKY
SFECGRWLDINEDDNEIVRELPATGALIDEPLPLIKYRVTICTGNVSGSGTDASVFLNVI
GDLGDTGERLMFMSKNNVNKFEKGNHDEFLIESVFLGQVRRVRVGHDGRGGGCGWYLDKV
LVREEGQPESSATEFPCFRWLDRNEDDGQIIRELVPAGDGVRLFNVGYHIAIKTGSVNGA
SSDSKVFVKLYGEKGDTDKVILAVSDNDLRNYFETARTDIFTLDTYDIGKINRLLIGHTN
EGLRAGWFLDSVQISVPVHGMQYMFPSHRWLCKDEADGKVEVEIYPSEVLEIEKLINYEI
TVVTGDMRSAGTNADVFCQIYGDEGKTEILALKSRSNNFERGTTEIFKIEALDVGKIYKI
RIFHDGKGIGDGWFLEMVDIKRLTMAMVQIEVKKEETTKKDKKKDKKKKKKEEEEVEIIE
ELQEVVETFTFACSRWLARDEEDGEIVVELLTDSNEELEMNSYEVYVYTGTMWGAGTDAK
VYITIYGESGDTGERWLRKSNRMNKFEKGQEDVFSLTAVDLGVLKKLRIRHDNSQASAGW
FLDRVEIIDTKDDTTYFFPCKRWLAVDEDDCQLARELVPVDEAFMKKGDEDEDDSEATLG
LEQKAMSTTYTVKIKTGDKKYAGTDANVFMTLFGTKDDTGIITLKASKTHRNKFERGMID
EFTVEAVDLGPLRKLRIGHDNCGGGSAGWFLDWVEIDAQSVGQKLRFPCGRWLDKGEDDG
AIVRDLFPNPLQSEFYTPFVPYEIKTFTSDVFGAGTDADVFIVLYGRDGVCTQQKSLCVN
KRERRMYFERGAEDMFIVELEDVGDVIEKIRIGHDNRGVNPGWHLDRVEIRRLLRKGKGS
ETIIFPSERWLAKSEDDGETVRELQPSDIITEKLSRDGSLKVTEVEVEDALETHTYNVSV
MTGDVSGAGTDANVFLTIYGDLGDTGERKLSKSETNSNKFERGSVDKFTIEAVDLGQVFK
IKIRHDNSMMSPDWYLDQVEVFDLDTEEVYLFLCERWLSRKREDRLIKRVFYVKDYEGVR
ESLNSKKTSALTVNSVDSNMNKKNKKKREDEEEENLPIIPYHVSIGTGPEREASTASRAY
VIIVGVNHSQTERLWLDLPNGRKGFLAGSLESFEAHGSDVGEIRKVELGHDGATPESCWL
VDELAVAVPTKGVKYIFACKCWLAKDRGDGLTARVFNVLDAEAIAISQKVIYELTVVTGD
VQNAGTDTKIFMSVFGANGSTEEILLRKNEDRFERGQEDTFNMEIDDIAPLKKMRLRIDG
SGSRPDWFLDKVIMRDLSTEEVYVFTYEEWLSRTRGPKRTMICEMPAVVDDEVMVELTTY
IIQVKTSDVSGAGTDANVWVIVFGENGDTGRLALKESTKSNKFERKQVDMFRFPDILSLG
DLSKVRVWHDNTGIAPGWHLEHIDVKDEFLDKTFRFPCDRWLSKKDDDGQTMRELACANN
DYLDLNEKTKYEICVTTGDTDETKENAWIVLEGKKCRSKELVMENSSKKKRFLRGNVDRF
EFSSKNVGDIAAICLGHTPKDGKKVKGEAYWHVEEVVVTEKELGNKYIFRCNALIPLSPK
RDEFLTFECTKTVESFASKARSLVPVKYEIIIITGDEKGAGTDANVFITIYGSNGDSGSR
QLRQRLRNLFERGQTDRFVVEMLDMGDLQRVRVEHDNSGLCPGWLLDRVEITNTANGVTT
IFLCGKWLDTNRADGQIARVLYPKY
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaaacagaaaaaatccacagctttggaagaaaccgaagaggttgatgacgaa
gtggaggaaacggagccaaatttaaaggagagtggccaggggttgacccatggagacgcc
acgaaaagaggaaagagtcggaggaaacacaagagcacagaacgctccgagacccaggag
ccgccagagaaagagaagaaggagaaagaaggagataaggtgaaaaagaagaaaaagaaa
ccaaatgatgatgctgaccctgaagctgaggctacagtttcaagtaaggatgctgagggt
gagcagaacaacaatgaggccacaaccaaacccagaaaggacaaatctgagcggcttaaa
gaggaagtgactgaggggaagaagaagcagaaaaaaaagtcgtccgtagagattccagag
ggagaggaggggatggggtccaaggacaaaaagtctaaaaatggcaagaagaagaagaag
tctcatgatgatgacggtgaggagcccttgatcgaggaagacgaagaggaagaggaagac
tcgaagaaaaagaaaaagaagaaggccaagaagagctctggagacagcgatgatgataaa
aagaaaaaagggaaaaaatccaaaagcaaacaggtggattacgccttgatctaccagaac
gagctgttcaactaccacacagactcttcagatggatatgaagacgagtactacaaaaag
aaagtatatgaggtggttacagtcacaggtgatgtaaagggagctgggactgatgccaat
gtttttgttaccctctttggagactttggcgtctcacccaaggttcacttggcaagcaac
acagaaaagagaagccggaatgcatttgagaagaataagacggatgttttccgcatcaaa
acacaaaacattggcccaattaaaaagctaagaattgaacatgacaacacaggaatgagc
gccagctggttcttggacagggtggtggtgaccgacatgatccggccccatctgcgcttc
tatttcccctgcaacaactggctgagccgggaggagggtgacaacctgtttgtcagggat
ctcctgggcagtctaaaccccatggatgtcccaaaattaaataaatatcttgtgagtgtt
ttcactgctgatatgaagggaagtgggaccgatgccgatgtcttcctgaatatctttgga
gaacatggtgacacaggggaaagaagactggatagtgacaaagacaactttgaacgtggt
tcagaggacaagtttacaatagaggctccaaacctgggaaggcttagaaaaatcaccatc
ggccacaacaacagaggttcctcagccggatggtttctagacaaggttatgatagatgat
atggggaataaagaaatatatgaatttccagtgaatcgctggtttgccatggatgaagat
gatggcaaaatacagagagacatcttggttggatcaatgcaaccaatggggattatatac
aatgttcaagtaatgactggtgatatcaggggagcaggaaccaactccaagatccacatg
gttatgcatggttccaagggcttaaaaaacagtggcaaaattttcctcgagggtggtgcc
tttgagagagctctcatcgacactttcaatgtagagatctgtgaactgatcagccctctc
agcagggtcaccattggtcatgataacggtgccgttggtgcagggtggtactgtgaaaag
gtggtgatatactgcccattcactggcattgagcaaacatttccatgtgggatgtggcta
gatgaggacgaaggagacggacttattgagagggaactgtatgagatggtctctctcaga
cagaaaaaacagaaaaagtacccatggtccttgtggatttggacctcagacataaaaggc
gccggcacagatgcccaagtatttctgcagatttatggtgagaaaggaaagtcagatgag
atcaaactggaaaacaattcagatagctttgaacaaggacagcttgacaaattcatgatt
gaaatgccggacatgggaagattgttaaaattgcggatctggcatgagaagagaaatccc
tttgctggctggcatttagcgaaggtcactttgctcaagacgctaaccatggacaagtat
tcttttgagtgtggccgctggctggacatcaatgaagatgacaatgagattgtcagagaa
cttcccgccacaggagcactcattgatgaaccgctgcccttgataaagtatcgggtcaca
atctgcactggcaacgtcagtggtagtggtaccgatgccagcgtgttcctcaatgttatt
ggagacttgggtgacacaggagagcgactcatgtttatgagcaaaaacaatgttaacaaa
tttgaaaagggaaatcatgatgagttcctcatcgagtcagtcttcctgggtcaggtgcgg
agagtcagagtaggtcatgacggccgtggtggaggctgtggttggtatcttgataaggtg
ttggtcagagaggagggacagcctgagtcctctgccactgagttcccatgtttcaggtgg
ctagatcgcaatgaggatgacgggcagattatccgtgagttggttccagctggagacggg
gtgcgtctctttaatgtcggctaccacatcgcaatcaagacaggcagtgtgaacggtgcc
agttctgactccaaagtgtttgtgaagctgtacggtgaaaagggcgacactgacaaagtg
atcctggccgtctcagacaatgacctcagaaattactttgagacggcaagaactgacatc
ttcacccttgatacgtatgacatcggaaagatcaaccgtcttctgattggtcacacaaat
gaaggtttacgagccggatggtttctggacagtgtgcagatttccgtgcctgttcatggg
atgcagtatatgttcccgagccaccgctggctctgcaaagacgaagcagacggcaaagtg
gaggttgaaatctatcccagcgaggtcttggaaattgaaaaattgatcaactatgaaata
acagtggtcactggcgatatgcgatcagccggaaccaacgccgacgtcttctgtcagata
tatggagatgaaggaaaaaccgaaatcctcgccctgaaaagccgttccaacaattttgaa
cgcggcaccactgaaatcttcaagattgaagctctggatgtcgggaaaatctataaaatc
cgaatcttccacgacggtaagggcattggagacggatggtttctggagatggtggacatc
aagaggctaacgatggccatggtgcagattgaggtgaaaaaagaagagacgactaaaaaa
gacaagaagaaggacaagaaaaagaaaaagaaagaagaggaggaggtggagataattgag
gagctgcaggaagtggtggagacatttactttcgcttgtagccgctggctggcccgggac
gaagaggacggggagattgtggttgaactgctgactgactccaacgaggaattggagatg
aactcttatgaggtttatgtgtacactgggacaatgtggggtgctgggaccgatgccaaa
gtctacatcaccatttacggagagagtggtgacacaggagagcgatggctcaggaaatcc
aatcgcatgaataaatttgagaaaggacaggaggatgttttcagcctgacagcagttgat
cttggggtcctgaagaagctcaggatccgtcatgacaacagccaggccagcgccggctgg
tttttggacagagtggaaatcatagacaccaaagatgacacaacgtatttttttccatgt
aaacggtggcttgctgttgatgaagatgattgccagcttgccagagagctggtccctgtg
gatgaagccttcatgaagaagggggatgaagatgaagatgactccgaagcaacccttggc
ttggaacagaaggccatgtcaacaacatacacagtgaagataaaaaccggcgacaagaaa
tatgcagggacagatgcgaatgtcttcatgaccctttttggtaccaaggatgacacaggt
ataattactctaaaggcctcaaagacgcatagaaacaagtttgagcgaggcatgattgat
gaatttacagtggaagctgttgacctgggacccttgagaaagctgcgaattggacatgac
aactgcggaggagggtctgcagggtggtttctcgattgggtggagatcgatgcccaatct
gtagggcagaagttacgctttccgtgcggccgctggttggacaaaggagaagatgatggg
gcgattgtcagggatctctttcctaaccctcttcaatcagagttttacacaccatttgtt
ccgtatgagattaaaaccttcaccagcgatgttttcggtgctgggacagacgccgacgtc
tttattgttctgtatggaagagacggagtgtgcactcagcagaagtctctgtgtgtcaac
aagagggaaaggagaatgtactttgaaagaggagctgaggacatgtttattgttgaatta
gaagatgtaggggacgtaattgagaagatccgcatcggccatgacaaccggggggtcaac
ccaggctggcatctggacagagtggagattagacgcctgctcaggaagggaaagggctca
gaaaccatcatcttcccatctgagcgctggcttgccaagtcagaagatgatggagaaaca
gtgcgagagctgcagccctctgacatcatcaccgagaagctttccagagacggcagcctg
aaagtgactgaggtggaagtggaagatgccctggagactcacacatacaacgtgtcagta
atgacaggtgatgtaagcggtgctggaacagacgctaacgtcttcctcacgatttacgga
gacctgggggacactggggagagaaaactgagcaagtcggaaacgaacagtaacaaattt
gaacgaggatctgtggataagtttacgattgaagccgtggacctcgggcaggtttttaag
ataaaaatccgccatgataacagcatgatgagtcctgactggtacttggaccaagtggag
gtgttcgatctcgacacagaagaggtctacctgttcttatgcgagcgctggctctccagg
aagagggaggacagactcatcaaaagggttttctatgtcaaggattatgaaggtgtcaga
gagagcctaaacagtaaaaagacctcagccttgacagtgaacagtgttgatagtaacatg
aacaaaaagaacaagaagaaaagggaggacgaagaagaagaaaatctaccgatcatacca
taccacgtctccatcggcactgggccggagcgggaggccagcaccgccagcagggcatat
gtaatcatcgttggggtcaatcactcccaaacggagaggctgtggcttgatcttcctaac
gggaggaagggctttctggctggctccttagagagcttcgaggcccacggttcagacgtg
ggggagattagaaaggtggagctcggccatgatggggccactccagagagctgctggcta
gttgatgagctggccgttgctgtgccaaccaaaggggtcaaatatatctttgcttgcaag
tgctggctggccaaagatcgaggggatggcttgactgccagagtattcaatgtgttagat
gcagaggccattgctatctcccagaaggttatctatgagttgacggtagtaaccggagat
gtgcagaatgcaggaaccgacaccaagatcttcatgtctgtgtttggtgccaacggcagc
acagaagagattctgctgcggaaaaacgaggacaggtttgagcgtggtcaggaagacact
ttcaacatggagatcgatgacatagccccactcaagaaaatgaggctccgtattgacggc
tccggcagcagacccgactggtttctcgacaaggtgatcatgcgtgacctgagcacagag
gaggtgtatgtgtttacctacgaggagtggctgtccaggacccgcgggcccaagaggacc
atgatctgtgagatgcctgctgtggtggacgatgaggtgatggtggagctcaccacctac
atcatccaggtcaagacgagcgatgtttcaggggcgggcaccgacgccaacgtgtgggtc
atcgttttcggagagaacggtgacactgggaggctggcgctgaaggagtccacaaagtcc
aacaagtttgagcgtaagcaggtggacatgtttcgcttccccgatatcctcagcctggga
gacctctccaaagtcagagtttggcacgacaacacaggtattgctccaggttggcacttg
gagcacattgatgtgaaggatgagttcctggacaaaaccttccgttttccttgtgaccgc
tggctttccaagaaagacgatgatggacagacaatgagagagttggcctgtgcaaacaat
gattatttagacctcaacgagaaaacaaagtatgaaatctgcgtcacaactggagacaca
gacgaaaccaaggagaatgcctggatagtactggaggggaagaagtgcagatcaaaagaa
cttgtaatggagaactcttcaaagaagaagaggtttttgaggggaaatgttgacagattt
gagttttcctcaaagaatgtgggtgatattgctgccatctgcctgggccacacgcccaaa
gatgggaagaaagtgaaaggagaggcttactggcatgtcgaggaggtagttgtgactgaa
aaggagcttggaaacaagtacatcttccgctgcaatgcccttatccctctgtctccgaag
agggatgaattcctgacctttgagtgcacaaagaccgttgagagcttcgcaagcaaagct
cgaagcctggtgcccgtcaagtatgagatcatcataatcacaggcgacgagaagggagcg
ggaacagatgccaatgttttcatcacaatctatggctccaacggagattcaggcagtcgg
caactgcggcagaggctacgtaacctctttgaacgggggcagactgatcgctttgtggtg
gaaatgctggacatgggcgatctgcagagagttcgagtggagcacgacaactcaggactc
tgccctggctggttgctcgacagggtggaaatcaccaacacagccaatggcgtcaccaca
attttcctttgtgggaagtggctggatacgaacagagcggacggacagattgccagggtg
ctctacccaaagtactga
DBGET
integrated database retrieval system
