Xiphophorus couchianus (Monterrey platyfish): 114149370
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Entry
114149370 CDS
T05908
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114149370 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114149370 (myo5b)
04131 Membrane trafficking [BR:
xco04131
]
114149370 (myo5b)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114149370 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114149370 (myo5b)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114149370 (myo5b)
mRNA cycle factors
P-body specific factors
114149370 (myo5b)
Membrane trafficking [BR:
xco04131
]
Others
Actin-binding proteins
Myosins
114149370 (myo5b)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
114149370 (myo5b)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
114149370 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
114149370
NCBI-ProteinID:
XP_027880973
LinkDB
All DBs
Position
8:complement(531889..563911)
Genome browser
AA seq
1821 aa
AA seq
DB search
MASDYNPYCKLTRVWVPDPDDVWKAAEITRDYKEGEAVLHLQLEDGTPLEYQVGPKANAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASASLPEFKDLSLMSAEDFTYTSLGENIFIEGV
NDADDFKKTREAFTLLGIKESSQSSIFKIMASILHLGNVEIVSERDGESCHVARNDVHLQ
HFCRLLGVELKQMDHWLCHRKLATASETFVKTMSCQQAINARNALAKHIYAHLFDWIVEH
INKALHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQDEYM
KEDIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSGHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASEFQLVADLFQDKSDAP
PSKASKVNVRSLKTVPKVPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPNDLKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYWVLMRKSDLTSADKKQVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGWLQRIRYR
RVRRAAIGLQRYGRGYLARRYAEFLRQNRAALICQKQYRMVRERRKFLRIRRATVTIQAY
ARGMFTRRIFWEFMLHHKAMLIQKHVRGWLQRKKFRQALDAAIIIQCAFRRMQAKRQLKQ
LKIEARSAQHLKKLNTGMENKIVQLQRKMDEQSKELKTQNEQLVTVNASLGSEVTKLQKQ
LEQVRSQQPDGGQVESLQEEVERLREELQEAQAHRKRMEEEHGNEKLSLSQRVEELEAEN
ALLKVEKDELNRRIQQQTMNSAAKESSASLEMELNQLRERYQDLIKEYSRLERRYDNLKE
EMDLSKFQPGHHRNPSNQSSLESDSNYSSVDKYVGETDDSIQQVKEMGVENAAMDISLFM
KLQIRVRELETERKRLQVNLDKMEEQAKCKGPEPKTPTSDVATGDLVYNNLKRQELETEN
KKLKNDLNELRKTIAERATQDGSSNELQDEYNLLLSQLKSANEELDARKEEVLILRTQIV
SNAEKNSEPNESEVDGGLNSSKEPLDKEEALKAYHGLCESKKLLEAQLQTQTRQHRDELE
ALHTQIELLKDDLEKKQELLNYMSTLSPEAKVDYTVQQELTRLTNSNLELKGMVEKMEKN
ERKLRKQLRIYMKKVQELAAQAAAHDVDQNKDEKNKMIQKDIRMTKVKNFEGMLEYLKED
EARLIKTLITDIQPSTVSATVPCLPAYILFMCIRHADYINDDQKVISLLTSSINAIKKVL
KRNNDDFEMISFWLANSSRLLHCLKQYSGEEAFMTQNTTKQNEHCLKNFDLAEYRQILSD
LSIQIYQQLIKVAQGIIQPMIVSAMLESESIPSLAGVKSMGYRNRSSSMDTDADGPTTYT
LQGLIRQLSQFNSIMRDHGLDPEVVGQVARQLFHCINAFTLNNLLLRKDICSWSTGMQLR
YNTSQLEEWLRANNLFQSKASATLEPIIQAAQLLQVKKKTSQDAEAICSLCTALTVQQIV
KILNLYTPLNEFEERVTVSFIRNVQSVLQERNDPPQLLLDTKHTFPVLFPYAPSALSLEA
VRIPPSLGLDFLVRSGPAPSD
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattataacccctactgtaagctgacccgggtctgggtcccggacccggac
gatgtgtggaaagctgcagaaatcaccagggactacaaggagggcgaggcggttctgcac
ctgcagctggaggacgggacgcccctggagtaccaggtgggtccgaaggccaacgctctg
ccgttcctcaggaatcccgacatcctggtgggggagaacgacctgacggctctcagctac
cttcatgaacccgccgtgctgcacaacctgagggtccgcttcctggagtccaacaacatc
tacacctactgcggtatcgtcctggtggccatcaacccgtatgagcagctgcagatctat
ggggaggaggtgatcaccgcctacagcggtcagaacatgggggacatggatcctcacatc
ttcgccgtggctgaggaagcgtacaaacagatggccagagacgagaagaaccagtcaatc
attgtgagcggagaatctggagcaggaaagactgtttcggcaaagtacgccatgagatac
tttgccacggtgggcggctcctccagcgacgctaatgtggaggagaaggttctggcctcc
aaccccatcatggaggccatcgggaacgccaaaaccacccgaaacgacaacagcagccgc
tttggcaagtacattcagatcggcttcagcagacattaccacatcattggagccaacatg
aggacctacctgctggagaaatcccgcgtcgtcttccaggctgaagaagagaggaactac
cacatcttctaccagctatgcgcctcagccagcctgccagagttcaaagacctcagtctc
atgagtgcagaagatttcacctacacgtctctaggagagaacatcttcatcgagggagtt
aacgatgctgacgacttcaagaagaccagagaggctttcacactgctgggcataaaggag
agcagtcagagcagcatctttaagatcatggcctccatccttcaccttggcaacgtggag
atcgtctctgagcgggacggagagtcctgccatgtcgcaaggaacgacgtccacctgcag
cacttctgcagactgctgggtgtggagctgaagcagatggaccactggctctgccaccgg
aagctggccaccgcctctgagacgttcgtgaagaccatgtcctgccagcaggccatcaac
gcccgcaacgccctcgccaagcacatctatgcccacctcttcgactggatcgtggagcac
atcaacaaggcgctgcacacctccagcaagcagcactccttcatcggggttctggacatc
tacgggttcgagacattcgaggtgaacagctttgagcagttctgcatcaactacgccaac
gagaagctgcagcagcagttcaactcgcatgtcttcaaactggagcaggacgagtacatg
aaggaggacattccctggacactcatcgacttctacgacaaccagccctgcatcgacctg
atcgaggcccggctcggcatcctggacctgctggacgaggagtgcaaggttccgaaggga
acggatcagaactgggcccagaagctctacaagcagcactccagcagcgggcacttccag
aaacccagaatgtccaacacgtccttcatcatcatccacttcgctgacaaggtggagtat
cagtgcgaaggcttcctggagaagaacagagacactgtctacgaggagcagatcaacatc
ctgaaagccagcgagttccagctggttgctgatctgttccaagacaagagcgatgctccg
ccctccaaagcctccaaggtgaatgttcgctccctgaaaacagttcccaaagtccccaac
aaggagcacaggaagactgtgggacaccagttccgctcgtcgctccacctgctgatggac
accctgaacgccacgacgccgcactatgtacgctgtatcaagccgaacgacttgaaggag
gccttctcgttcgactcccggcgggccgtgcagcagctccgggcctgcggggttctggag
acgatccggatcagcgccgctggatacccgtccaggtggacctatcccgacttcttcagc
cggtactgggttctgatgagaaagtcagacctgacgtcagcagacaagaagcaggtgtgc
aagaacctcctggagacactgatcaaggaacccgacatgttccagttcgggaagacgaag
atcttcttccgggccggccaggtggcgtacctggagaagcttcggaccgataaattccgc
tctgcctgcatcaagatccagaagacggtccgcggctggctgcagaggatccggtaccgc
cgggtccgccgggccgccataggcctgcagagatatggccgaggttacctggcccgcagg
tatgcagagttcctgcgtcagaaccgggccgccctgatctgtcagaaacagtaccgcatg
gtccgagagcggaggaagttcctgaggatccggcgggccacggtcaccatccaggcctac
gcccgaggcatgttcacccgcaggatcttctgggagttcatgctgcaccacaaggccatg
ctgatccagaagcacgtgcgcggctggctgcagaggaagaagttcaggcaggcgctcgac
gccgccatcatcatccagtgcgccttcaggaggatgcaggccaagcggcagctgaagcag
ctgaagatcgaggcgcgttccgctcagcacctcaagaagctcaacacgggcatggagaac
aagatcgtccaactgcagaggaagatggacgagcagtccaaggagcttaagacccagaac
gagcagctggtgacggtgaatgcctcattggggtcagaggtcaccaagctgcagaagcag
ctggagcaggtccgcagccagcagcctgacggaggccaggtggagtcgctgcaagaggaa
gtggagaggctgcgggaggagctgcaggaggcgcaggcccacaggaagaggatggaggag
gagcacggcaacgagaagctcagcctgagccagcgggtggaggagctggaggcagaaaac
gctctgctgaaggtggagaaggacgaactgaaccgacggatccagcagcagaccatgaac
tctgcagctaaggagagcagcgcctccctggagatggagctgaaccagttgcgggagcgg
taccaggacctaatcaaggagtactccaggctggagcggagatacgacaacctgaaggag
gagatggatctgagcaagttccaacccggccaccacaggaacccgtccaaccagagcagc
ctggagtcggactctaactactcctctgtggacaaatatgtcggagagaccgatgactcc
atccagcaggtgaaagagatgggagtggagaacgctgccatggacatcagcctgttcatg
aagctgcagatacgagtgagggagctggagacggagaggaagaggctgcaggtcaacctg
gacaagatggaggagcaggccaagtgcaagggtccggagcccaagaccccaacgtctgat
gtggcaacaggagatctggtctacaacaacctgaagagacaggagctcgaaactgagaac
aagaaactgaagaacgacctgaacgagctgaggaagaccatcgccgagcgggcgacgcag
gacggctcgtccaatgagctgcaggacgaatacaacctgctgctcagtcagctgaagtca
gccaacgaggagctggacgcccggaaggaggaggtgctcatcctcaggactcagatcgtc
agcaatgccgagaagaacagcgaacccaacgaaagtgaggtggacggaggactgaacagc
agcaaggagccgctggacaaagaggaggccctcaaagcgtaccatggactgtgtgagtcc
aagaaactgctggaggcccagctgcagacccaaacccggcagcaccgggacgagctggag
gctctgcacacccagatcgagctgctgaaggacgacctggagaagaagcaggagctgctc
aactacatgtccactctgtcccccgaggccaaggtggactacaccgtccagcaggagctc
acacggctcaccaacagcaacctggaactcaagggcatggtggagaaaatggagaagaac
gagaggaagctgaggaagcagctgaggatctacatgaagaaggtccaggagctggcagct
caagcagcggctcacgatgtcgatcagaacaaggatgaaaagaacaagatgatccagaaa
gacatccggatgaccaaggtcaagaacttcgaggggatgctggagtacctgaaggaggac
gaggcccggctcatcaagaccctcatcacagacatccaacccagcacggtgtcggccacc
gtcccctgcctccccgcctacatcctcttcatgtgcatccgccacgccgactacatcaac
gacgaccagaaggtcatctctctgctcacctccagcatcaacgccatcaagaaggtcctg
aagaggaacaacgacgactttgagatgatctcgttctggttggccaacagcagccgcctg
ctgcactgcctgaagcagtacagcggtgaggaggccttcatgacccagaacacgaccaaa
cagaacgagcactgcctgaagaactttgacctggccgagtaccggcagattctgagcgac
ctgtccatccagatctaccagcagctcatcaaggtggcccagggcatcatccagcccatg
atcgtgtcggccatgttggagagcgagagcattcccagcctggccggagtcaagtccatg
ggctacaggaaccgttcgtccagcatggacacggacgcggacgggcccaccacctacacc
ctgcagggcctcatccggcagctcagccagttcaacagcatcatgagggaccacggactg
gaccccgaggtggtgggccaggtggcccgccagctcttccactgcatcaacgccttcacc
ctcaacaacctgctgctgcgtaaggacatctgctcctggagcacgggcatgcagctcagg
tacaacaccagtcagttggaggagtggctgcgagccaacaacctgttccagagcaaagct
tcggctacgctggagcccatcatccaggccgcccagctgctgcaggtcaagaagaaaacg
tctcaggacgccgaggccatctgctcgctgtgcacggctctgaccgtgcagcagatcgtg
aagatcctgaacctctacacgcctctgaacgagttcgaggagcgagtcaccgtgtccttc
atcagaaacgttcagagcgtcctccaggagaggaacgacccgccgcagctgctgctggac
accaagcacaccttccccgtcctgttcccctacgccccgtccgccctcagcctggaggcc
gtgcgcatccccccctccctggggctggacttcctggtccgatccggccccgccccctca
gactga
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integrated database retrieval system
