Xiphophorus couchianus (Monterrey platyfish): 114149432
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Entry
114149432 CDS
T05908
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114149432
03041 Spliceosome [BR:
xco03041
]
114149432
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114149432
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114149432
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
114149432
NCBI-ProteinID:
XP_027881083
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Position
8:complement(23974412..23985082)
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AA seq
386 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETASSKQLSFDEVLNQSSLSNCTVYCGGVTQGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNIVKCYWGKETADIVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSSTQQISQYVPNGWQVPSYGVYGQAWDQQGYNHLHAGAGWTGLSAVSNGGM
VEPGQGVNGTMLTNQAGMSTTGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagccgaaaaccctgtatgtggggaacctgtccagggacgtgacagag
gccctcatcttggaattgttcagccagattgggccttgtaaaagctgcaaaatgatagta
gatacagcaggtcacgatccatactgctttgtggagttctatgagcatagacacgccact
gctacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggtcaactgg
gccacgaccccaacgagccaaaagaaagacacaagcagccacttccatgtttttgttgga
gaccttagtccagaaatcaccacagatgacataaaagcagcttttgctccttttggaaaa
atatcggactgtcgcgttgtgaaagacatggccacaggtaaatctaaaggctatggtttt
gtctccttcttcaacaaatgggatgcagagaacgccatccagcaaatggggggccagtgg
ctaggaggacggcagataaggaccaactgggccacgaggaagccggctcctaaaacgaca
aatgaaacagccagttccaaacagctctctttcgatgaggtgttaaatcagtccagcctc
agtaactgcacagtctactgtggaggagtcacacaaggtctcacagagcaaataatgaga
cagaccttctcaccttttggccaaataatggagatccgtgttttcccagaaaaaggctac
tcctttgtgaggtttaactcccacgaggccgcagctcatgccatagtttctgtaaacggt
acctccatagagggcaacattgtaaagtgctactgggggaaagaaacagcagacattgta
cagggccccatacagcaggtacagatggcacagcagaacacgctgagctttgcagcccaa
ccctacaaccagtggggccagtggtacagcagcacgcaacagatcagtcagtacgtgccc
aacggatggcaggtgccaagctacggcgtctacggacaggcctgggatcagcagggctac
aatcatttacatgctggagctggatggacgggcttgagcgccgtgagcaacgggggcatg
gtggagcctgggcagggagtcaacgggacaatgctaaccaaccaggcaggcatgagcacc
actggataccccacccactga
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