Xiphophorus couchianus (Monterrey platyfish): 114149438
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Entry
114149438 CDS
T05908
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114149438 (sbno1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114149438 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114149438
NCBI-ProteinID:
XP_027881089
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All DBs
Position
8:complement(25277934..25301058)
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AA seq
1406 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLGLLDVDSQDVTQPSTAQQSISISALDVGLGAESVEVVR
SEPQTAVPVVTIRQHKPQPSTTTFVLNQLNQLPSLGAAATKQSVTNPIKHTITVTKVVHV
TSSGLRASATPPPSSVPPSVSTLVPSNKDQQIQLKDLLRPNKVKTTILKGNSLMELMKLK
PPPDIAPPVATATATGAADINNGIKKEVFGKDAARIWIKDDIKMQNFSNTLKAAGLKEED
EHEEEEEEELGHAETYAEYMPMKLKIGLRHPDPVVETSSLSSVSPPDVWYRLSIPEEVID
RGCLSALQLEAITYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIG
ESQSGGKYKTRFQQLLHWCGEDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLTQQYINMYNKSVRLWVSAREKFQQAANLMEAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLIEKHFPAPDRQKLYSLLGIDLSAKKTPSPAENAAQPEQKGKK
RKGSEAKKQPKKKPRKHGGLSGTSSEESESEESDRESGKDSDDSFKSISSGDEDDDFNPF
RDESDEDEEDDPWLIRKEPKKGKKEKKKKRRKSIDPDSIQSALLASGLGSTRPGFTASVN
APLTPATVKTESQESCLTSQDSVELAQKMKKQLLEQLEGLAEDLPPNTLDELIDELGGPE
NVAEMTGRKGRVVSNDDGSITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSG
ISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRF
ASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDAPLVPPPS
DFKGDFFREIQSGLIGVGLINVEDRSGVLTLDKDYNNIGKFLNRILGMEVQQQNALFQYF
SDTLAAVIQEAKKNGRYDMGILDLGSGDEKVKKADCRKFLTPGYTTSGHVELYTVGVERG
MSWEEATHAWAEQNGPDDGFYVQMRNNRKTAILVKEVNTKKRLFLVYRPNTGRQVKLETY
ADIKKKFKKVLSEDAKQHWTDQYQSSAKICSHAYWRGNCKKASVGLLCEIGLRCRTYYVL
CGSVLSVWNELEEVLSPVSGSNVKVQIVRLRTEDGQRIVGLIIPANCVSPLINKLLTSDQ
SQQLAVQEQQKRQLLHPQSLTHVLNT
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttgctccttgctgctttaagtgagagtggaatttgcccaaat
gatctcgggctcttagatgtggattctcaggatgttacacagccttctacagcccagcaa
tccatttccatcagcgctctggatgttggtctgggagcagaatcggtggaagttgttcga
tctgagcctcaaactgcagtcccagttgttacaatcagacagcataaacctcagccatca
acaaccacatttgtcttaaatcaactgaatcagttgccgtcactaggggctgctgccacc
aagcagtcagtcaccaacccaatcaaacataccataacagtcaccaaggtggtccatgtc
accagttcaggactgcgcgcttcagcaacccctccaccctccagtgttcctccttcagtg
tccacgctagtgccttctaacaaagatcagcagattcagctgaaagaccttcttcggccc
aacaaagtgaaaaccaccattttaaagggcaacagtctgatggagctgatgaaacttaaa
cctccacctgacattgctccacctgtggcaacggctacagcaacaggcgcagctgacata
aacaatggaatcaagaaagaagtgttcggcaaagatgctgccaggatctggattaaagat
gacattaaaatgcaaaacttttcaaatactctgaaagctgcaggcctaaaagaagaggat
gaacatgaggaggaagaagaagaagagctgggtcacgcagagacgtatgcagagtacatg
cctatgaaattaaagattggcctgaggcatccggatcctgtggtggagaccagctctctg
tccagcgtcagccctccagatgtttggtacagactgtccatcccagaggaagtcattgat
cggggctgcttgtcagcactgcagctagaggccatcacatatgctgctcagcaacatgag
acattcctacccaacggcgaccgagctgcctatttgattggagacggagccggtgtgggg
aaaggccggactatcgcagggatcatttatgagaactaccttctgggcagaaagagatca
ctttggtttagtgtctctaatgatttaaagtatgacgctgaaagggatttgagggacatt
ggcgccaagaatatccaggttcattcactaaacaagtttaaatacggcaaaatctcctcc
aaacacaatgggagtgtgaagaaaggggtgatcttcgccacctactcatctttgatagga
gagagccagtcaggagggaagtacaagaccagatttcaacaacttctccactggtgtggg
gaagactttgatggagttattgtctttgatgaatgtcacaaagctaaaaacgtttgtccc
atcggctcctccaagccgactaagactggcctcgctgttttggagctgcagaacaaactt
cccaaagctcgggttgtgtatgccagcgctaccggagcctctgagccacgaaacatggcg
tacatgaaccggctgggaatatggggtcataaaacgccgtttagagagtttggcaacttt
atccaagcagttgaacgcagaggtgttggtgccatggaaatagttgctatggacatgaaa
ctcagagggatgtacatagccagacagttaagttttacaggcgtgactttcaagattgaa
gaagtccctctaactcagcagtacatcaacatgtacaacaagtctgtgaggctgtgggtt
agcgcacgtgagaagttccaacaagctgccaacctcatggaagcagagcagcgcatgaag
aagtccatgtggggtcagttctggtccgcccatcagaggttcttcaaatatctctgcatt
gcctccaaagtccgccgggtggtccagttagccagagaggaagttcagaacggaaagtgt
gtggtgatcggtctgcagtccactggtgaggcgagaacactggaagccttggaggaagga
ggaggagagctcaacgactttgtgtcaacagcaaaaggtgtgctgcagtccctgatagag
aagcacttcccagctccagacagacagaagctttacagcctgctaggcatcgacctctct
gcaaaaaaaactccctctcctgctgagaatgcagcacagccggaacaaaagggaaagaag
agaaaaggttcagaggccaaaaaacagcctaaaaagaagcctcgcaagcacgggggcctg
tccggtacgagttcagaggagagcgagtccgaggaatcggacagagagtctgggaaagac
agcgacgacagcttcaagtctatcagctcaggagacgaagacgacgatttcaatccattc
agagacgagtctgatgaagatgaggaggacgatccttggctaatcagaaaggagccaaag
aaagggaagaaggagaagaagaagaaaagaaggaagagtattgatccggactcaattcaa
agtgccttgttagcctcagggctgggctccaccaggccaggtttcaccgcctcagtgaac
gcccccctcactcctgctaccgttaagacagagagccaggaaagctgcctaacgagtcag
gactcggtggaacttgcccagaaaatgaagaaacagctgctggaacaactggaggggttg
gcagaagatctgcctcccaataccctggacgagctgatcgacgagctgggagggccggaa
aacgtggcggagatgaccggtcgtaaaggtcgcgtggtcagtaatgatgacggcagcatc
acctatgagtcccgctctgagctggacgtccctgtagaaatcctcaacctgactgagaaa
cagaggttcatggatggagaaaagaacatagccatcatctcggaagcggccagctccggc
atttccctgcaggccgatcggcgcgtgaagaaccagaggaggagagtccacatgaccctg
gagctgccgtggagcgcagacagagccatacagcagtttgggcgtacacacagatcaaac
caggtcacggctccagagtacgtctttctcatatcagaactggcaggagagcaaagattt
gcatccattgttgccaaaagactggaaagcctgggggctctcactcacggagaccgacgg
gcgacggaaactagagatctgagcaggttcaactttgacaacaagtacggcagaaacgct
ctggaaattgtgatgaagtcgatagtaaagctcgacgctccgctggtgcctccaccctca
gacttcaaaggggattttttcagagagattcagagtgggctgataggtgtgggcctcata
aatgtggaggacagatctggagtgcttacactggacaaagactacaacaacatagggaaa
ttcctgaatcggatattgggcatggaggtccagcagcaaaatgccttgttccagtatttc
tctgacactctggcagcagtgatccaggaagccaagaagaatggcagatatgacatgggc
attctggatctcggctcgggtgacgagaaggtgaagaaggcggactgtcgaaagtttctg
acgccaggctacactacatcaggacacgtagaactctacactgtcggcgtggaaagagga
atgtcttgggaagaagcgacacacgcctgggcagaacagaacggcccagacgatggcttc
tatgtccagatgagaaataacaggaaaacagccatcctggtgaaggaagtgaacactaag
aagaggctgttcctggtgtacaggccaaacaccggcagacaagtcaaactggaaacatac
gccgacatcaaaaagaagtttaagaaggttctgtcagaagatgccaagcagcactggact
gaccagtaccagtcatcagcaaaaatatgctctcatgcgtactggcgcggcaactgcaag
aaagcctcagttggtctgctgtgtgaaatcggcctgcgctgcaggacgtactacgttctg
tgtggctctgtgctcagcgtgtggaacgaactggaagaagttctttctccagtcagcgga
agcaacgtgaaggtgcagattgtccgcctgcgcaccgaggatggtcagaggatagtcggg
ttgatcattccagcaaactgcgtgtctccgttgatcaacaagctcttgacctcagaccag
agccagcagctggctgtgcaggagcagcagaagaggcagctgctccaccctcaaagtctt
actcatgtgctcaacacataa
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