Xiphophorus couchianus (Monterrey platyfish): 114149446
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Entry
114149446 CDS
T05908
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114149446
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
114149446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
114149446
NCBI-ProteinID:
XP_027881110
LinkDB
All DBs
Position
8:22866784..22882804
Genome browser
AA seq
2155 aa
AA seq
DB search
MFRRSRFSVRPNVGTVGRTAAGTPQETPAASQETSQTQKEPNESNNASLASNSDVTPSEK
APSTGDGNDQNGEGSSSSASVQRRKRFSIKPKVAPGRPLAISRTPKSPIKAVTAPSGDGV
CGSDLEKPLTSSQPAKTAAPRGLQSPRRRRLSEDAKQHKIQSKVGPVSSEKPGPSSDSPS
EDSPKPTHLPADRSKQLENTSTSQAKEVHSRAHDRVPPSIPDKEATEISEKAKTLISSKN
VTSMTPSVMSLSRLLNDPSDVQRMLKAQRLRELLRQERCKETNLKRAKVRRKEYILDPTK
MTMRDLIHYLPESNPMRSSLEEHHEETETMIPPSPRREEPTERPPVPEVTPAKVNTREEE
VEEEEEDAAAEEDQEESVMVPQLKVAEDGSLIIDEESLTVEVQRAKGPNPASDRDPIFER
GSTTTYASFRKSNYSKPWSIEETDMFYLAVSMVGTDFSMICQLFPHRARSEIKNKFKKEE
RQNSWRIDKAFRERRKLDIEYFSKLLEKIMEFQREKKKLKSLVGKNNKRKARTRPKGKKS
AKSLSDMEEEEQEEKEEDDEIPDLEKENEDQCNEGETPASEPKKKRKRKNGEASPEETNE
KKNKTGDVPEDSEPALPESHTDSEMTPNVNTTKDPVIHPAKLSRAGAPKPLLPLGLMRGK
KGKSEETQSDKGDKNASEEQVNKNESNARKTSREKFSGDDISSEEEEETVKHQGPTRYGR
IPKPNLAFAYPSKDELHSSETETSSASKSKAKGALKRGKSLKPQSDQKPKKSKLVTLRSS
KPDFSDDEDEEDAGCSSGKGIMSSGLHSLNAVISEVDDPMAELDILASMPDMLGISQDAL
CPDSSCHQTQYETSTAETCDHQLDLLVDVIDIITSEQTELSQDDSYNEAAQTLLTIGKVS
HVSMSTQGEVTTQASTSGMATDGEKSDHLDEQIVADAQPQSPLSAACSQTGGEISETVAS
VDSGNLEMSHSDIFHVKTIEPTCDELKTAQSSNGNSPSTKVARFSKVKPKPNLGRSSRTA
PPTIQMEISKKMEAEERHSVLAVEASPKRADSNEALLEDGDSPKDVQLTEEKSGSSSITQ
GCSMSLSQVECSGNEVPRGTNSPNRKDVSVAPHDRTVESDLSSSLESKSELTHIVPEPCT
PSDSIQDSSSKHLPAEKDLPENQKSMGVSAPRRSRLSKIKPNLPQMSRTAMNKSQISKET
VKTDPLTTSNSESQKQTILDVETQSTSFLSRNVDVSPQAECQNTLQVLSSPETQAEYKSN
VELAAAPEHSCSPATSVSPIENKPANKQESNVTSAQLRRSNLQKVKPKPNLTQTSRGKIT
KPQATEDTAMKSSIESTRIHLEDTDCASRLDPILASDSIHESTAKQVTNKPAPTEVVIHV
DREHRPVDQGQKQTSIESCSTFKSTDKASDSLDETSEISCSSAMTSHVSRTNFDSDQDRC
GQSAVSVRPEEESAVCKPDGENTTSEQLRRNRISKIRLRPNISQASRASKLKPRTSESQS
EKHANPEPDPDPTCGPSLDKQSENNNLVMELTPPVTSQSSEMKKTLSEAKKQNFDANPQS
TSSENLMGATSSTFSNKNPTVKEPQFGQGSNLNSGADLERSNFSACFAPSKELQVNQKED
KVPSAQLVKRSRSQKPKPNLSQTSRPVRSKADDKSEVQPQLGAQQTIAKKEKYSEFTDAN
LTAQGGPSESMNVSQTIKSAITSNSKIFSSARDQTEPCAASASDQTGDKLNTGNSTTTQA
VRRPQSPASEQNRETEEKVLTNVEVSSLAVTEKTTPQRRQRFSKVKPKPNLEKTCRVAVR
SLQSDDHSRPLEDQSKGMSSVALEQPLESTKDKMSDKDPANSDCLPSGDCNLAVKPKPSL
RCSGRLRQTQPAENTKPTETDSDSTSQAFGASREIKKSVRELKADDPEKGVIEKSSEKDS
SSIDSRSSHSCVKPQSSYGHETSRAEAIQRDPLLSQILPEQVPSDPDEPFFILSLTEIPV
PSAGEVGVSGAQNLSYCPAAGASGQQPSVSEVSLKAEENHPKVSVEPKVFKNSIAGPNEK
AGDDLGDKETLLSRKAKVSEASVAETRSSKCRKAASKRNQKKTPTKAEQTSSKPTASASN
SNIPSQTAAAADCAHIGLRSTALTSPERESGFVDNEPTSVSQYFLSDIFTEVDEG
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcggtcgagattcagtgttcgccccaatgtcggcacggtcgggagaacagca
gcaggaacgcctcaagagaccccagcagcaagccaggagacaagtcagacccaaaaggaa
ccaaacgagagcaataacgcttctctagcaagcaactctgacgtgaccccatcagaaaag
gctcccagtacaggcgatggcaatgaccagaacggggaaggctccagctcctcggcatca
gtccagagacggaagcgcttctccatcaagcccaaggtggctcctggacggcctctggcc
atctcccggacaccaaaatcccccatcaaagcagtcaccgcgccttcaggcgacggcgtg
tgtgggtcagacctagaaaagccgttgacatctagtcaaccggcgaaaacggcagcccct
cgaggactccagtccccgaggcgaagaagactctctgaagatgcaaagcagcacaaaata
caatcaaaagtcggccccgtctcctctgagaaaccaggaccttcgtctgattctccgtct
gaggactcgccaaagccaacccatctgccggcagaccgcagcaaacaactggaaaacact
tcaaccagtcaggccaaggaagttcattcaagagcacacgacagagtgccgccttctata
ccagataaggaagctacagaaatatcagagaaagcaaagactctcatatcatcaaaaaat
gtaacttcaatgaccccatcagtgatgtccctgagcagactcctgaatgacccgtcagac
gtacagaggatgttaaaggctcagaggctgagagagctgctgaggcaggagcgctgcaaa
gaaacgaatctcaaaagagctaaagtacgtcgaaaggagtacattttagacccaacaaaa
atgaccatgagagacctcatccattacctccctgagtccaatcccatgagatccagtttg
gaagaacaccatgaggagaccgagacgatgatcccaccttcaccaagaagagaagaacca
acggagcgacctccggtacctgaggtcacccctgccaaagtgaataccagagaagaagag
gtggaggaggaggaagaagacgctgcggcagaggaagaccaagaagaatctgtcatggtt
cctcagctcaaagtagcagaagacggctcgctgatcattgatgaagagagcttaacggtg
gaagtccagcgagccaaagggccgaacccagcgtccgacagagaccccatctttgaaaga
ggctccacgacaacttatgcaagcttcaggaagtcaaattactccaaaccctggtcgatt
gaagaaactgacatgttctacctggcagtcagcatggtggggacagacttctccatgatt
tgccaactgtttccacacagagctcgatcagaaataaaaaacaagttcaaaaaagaagag
cgacaaaactcctggaggatcgacaaagcttttagagagaggcgaaaactggatatagaa
tacttttctaagctgctggagaaaattatggagtttcagagagagaagaagaaactcaag
tcactcgttgggaagaacaacaaaaggaaagccagaacgaggccaaagggcaagaaatcg
gcaaagagtctgagtgacatggaggaagaggagcaggaggagaaggaggaggacgacgaa
attcccgacttggagaaagagaacgaggaccagtgtaacgaaggggaaactcctgcttct
gagccaaagaaaaaacgcaaaaggaaaaacggggaggcctcgcctgaggaaacgaatgag
aagaaaaacaaaacaggtgacgtacccgaagactcggagccagcacttcctgagagccac
accgattcagaaatgactccaaacgtaaacacaacgaaggatccggttatccatccagcc
aagctctcacgagctggagcaccaaaaccactcctgcctttgggcctgatgcgaggcaaa
aaggggaaaagtgaagaaacccagtcagataaaggggataagaatgcgagtgaagaacag
gtgaataaaaatgaatcaaatgcacgcaaaaccagtagggaaaagttttctggagatgac
atttcttctgaagaggaagaggaaacggtaaagcatcaaggacccacgagatatggaaga
atccccaaacccaatctggcctttgcttatcctagcaaagatgaattacattcctctgaa
actgaaacttcttcagcctcaaagtccaaagccaaaggtgctctgaaaagaggcaaatca
ctgaagccgcaatcagaccaaaaacccaagaaatccaaactggttactctcagatcctcc
aagccagacttcagcgacgacgaagacgaagaagatgcaggttgcagctccggtaaaggc
atcatgtcttctggcctgcactcgctgaatgctgtgatttcagaagtggatgaccctatg
gccgagcttgatattttggccagtatgcccgatatgctgggcatctcccaagatgcactg
tgtcccgattcatcttgccatcagacacagtatgagacaagcactgcagaaacatgtgat
catcagttggacctgctggttgatgttatcgacattattacctcagaacaaacagaatta
tctcaggatgacagctataatgaggccgctcaaaccctcttgaccatcggcaaggttagt
cacgtctctatgtcaacacagggagaagtgactacacaagcctccacatcaggaatggca
acggatggggaaaaatcagaccacttggatgaacagattgtggctgatgcacaaccgcaa
agtcctttgtctgctgcatgttctcagacaggtggagaaatttcagaaactgttgccagt
gtggactcaggaaacctagaaatgagtcatagcgacatatttcatgttaaaaccattgaa
ccaacatgtgacgagctaaagactgcacagagctcaaatggcaattctccgtcaaccaag
gtggcgcgcttttctaaagtgaagcctaagccaaaccttgggcgatcttcaaggaccgca
cctccaacaatccaaatggagatttccaaaaaaatggaggctgaagagaggcactcggtt
cttgctgttgaagcatccccaaagagagcagactctaatgaagcattgttagaagatggt
gattctcctaaggatgttcagctaacagaagagaaatctgggagttcctcgatcacacaa
ggttgctccatgtctttatcccaggttgaatgtagcgggaatgaggttcccagaggtaca
aactcacccaatcgtaaagatgtaagtgttgcacctcatgacagaactgtcgagtctgat
ttaagcagctctttggaatctaagtcagaacttacgcatattgtaccagagccatgcacg
ccttcagactcaatccaagacagcagcagcaaacatcttcctgctgaaaaagatttacct
gaaaatcaaaagagtatgggtgtgtctgcacctagaaggagtaggttgtcaaaaatcaaa
cccaaccttccgcaaatgtcaagaactgcaatgaataaatctcagatcagtaaagagact
gtaaagacagacccacttactacgtcaaactcagaatcccaaaagcaaaccatactggat
gtggaaacccagtctaccagtttcttgtcgagaaatgttgatgtgtcccctcaagcagaa
tgtcagaatactcttcaggttctttctagtccagaaacacaagctgaatataaatcaaat
gtagaattagctgcagccccagaacatagttgtagtcctgctacttcagtctctcctata
gaaaacaaaccagctaataaacaagagagtaatgttacatctgctcagttgagaaggagc
aatttgcagaaggttaaacccaaaccaaatctaactcagacttcaagaggtaagataact
aaacctcaagccacagaagacacagcaatgaaaagttctatagagtcgacacggattcac
ttggaagacactgactgtgcttcaaggttggacccaatactggcttcggactccattcat
gaatcgacagcaaagcaggttacaaacaaacctgcacctactgaggttgttattcatgtt
gacagggaacatcgtccagttgaccaaggtcaaaagcaaaccagcatcgaatcatgttcg
actttcaagtccacagataaagcttcggattctctcgatgaaacgagtgaaattagttgc
agtagtgcgatgacatcacatgttagccgaacaaactttgattctgaccaagaccgatgc
ggtcaatctgctgtgtctgtaagacctgaggaagagtcagccgtctgcaaacctgacggg
gaaaatacaacttctgaacagctgaggagaaatcgaatatcaaaaatcagacttagacct
aacatttctcaagcatccagagcttcaaagctgaaacctcgaacatcagaaagccagtca
gagaagcacgcaaatcctgaaccggacccagacccaacatgcggcccgtctttggacaaa
caaagtgaaaataataatcttgtgatggaattaactccacctgttacctctcaatcttca
gaaatgaaaaagacactttctgaagcaaagaagcaaaactttgacgccaatcctcagtca
acatccagtgaaaacctcatgggtgcaacatcttcaaccttcagcaataaaaacccaaca
gttaaagaaccacagtttggtcaagggtcaaacctgaattcaggagcagatctagaaaga
agcaacttttcagcttgctttgcaccctctaaagagttacaagtcaatcagaaggaggat
aaagtgccatctgctcagctggtcaaacggagtcgatcacaaaagcctaaaccaaattta
tcacagacctcaagacctgtaaggtccaaagctgatgacaaatctgaagtccaaccccaa
ctcggtgcacagcagacaatcgcaaaaaaagagaagtattctgagttcacagatgcaaac
ctgacagctcaaggtggaccaagtgagagcatgaatgtttcacaaacaattaaatcagca
ataaccagcaattcaaagattttcagttcagcccgagatcagacggaaccttgtgctgca
tccgccagtgatcaaacgggtgacaaattaaacacaggaaactcaacaactacgcaggct
gtaagaagacctcaaagcccagcctctgagcaaaatagagaaactgaggaaaaagtacta
acaaatgttgaagtttcaagtttagccgttacagaaaaaacaacgcctcaacgaaggcag
cgcttttccaaagtcaaacccaaacccaatttagaaaaaacctgtagagttgcagtcaga
agtcttcagtcagatgatcacagtagacctcttgaagaccagagtaaagggatgtcgtct
gttgcattggagcaaccgctggaatcaactaaggacaaaatgtcagataaagacccagca
aactctgactgtcttccatctggagattgcaacttggctgttaaaccgaaacccagtctg
cgctgcagcggacgtcttcggcaaacccagccagctgaaaacacaaaaccaacggaaaca
gactccgacagtacttcgcaagcttttggtgcctccagggaaatcaagaaatctgtacgt
gaacttaaagcggatgatccagaaaaaggagtcattgagaaatcaagtgaaaaggactca
agttcaattgattctcgttcttctcatagttgtgttaaaccacaatcttcttatgggcat
gaaacatcaagagccgaggcgattcagagagatccgctcctgtctcagatactgccagag
caagtgccttcagatccagatgagccctttttcatcctctccctgacggagatcccggtc
ccctcagcaggggaagtgggagtgagtggagcccagaacctctcttattgtcccgcagca
ggtgcatcgggacagcagccgagtgtttctgaggtgagtttgaaagcagaagaaaaccat
ccaaaagtttctgttgaacctaaagtcttcaagaactccatcgctgggccgaatgaaaaa
gccggtgatgatttaggcgacaaggaaactcttctcagcaggaaagccaaagtttccgag
gcgagcgttgctgaaacgaggagttccaagtgtaggaaagcagcaagtaagagaaatcag
aagaaaactccaaccaaagcagaacagacatcttcaaaacctacagcctccgcatcaaat
tctaatattcccagtcaaacagcagcagcagcagattgtgcgcatattggcctgaggtct
acggctttaacttccccggaaagggagagcggctttgttgacaacgagcctacgagcgtg
tcgcagtacttcctaagcgacatcttcacagaagttgatgagggataa
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integrated database retrieval system
