Xiphophorus couchianus (Monterrey platyfish): 114149451
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Entry
114149451 CDS
T05908
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420
Nucleotide excision repair
xco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114149451
09124 Replication and repair
03420 Nucleotide excision repair
114149451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xco03051
]
114149451
03400 DNA repair and recombination proteins [BR:
xco03400
]
114149451
Proteasome [BR:
xco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114149451
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114149451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Crinkler
Rad60-SLD
Rad60-SLD_2
Dsc3_N
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
114149451
NCBI-ProteinID:
XP_027881127
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All DBs
Position
8:17991063..17997938
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AA seq
394 aa
AA seq
DB search
MLVTLKTLQQQTFKIDIDEEETVKILKERIEKEKGNDIFSVAAQKLIYAGKILNDDTPLK
EYNIDEKNFVVLMVTKPKMASATTQTSSTSSAPVTTAPAAPPAAPPAALSSLENPAEPTS
SDNKSEDKTEVTPPSSDPFSTSFGSSGSPETSPNSNLINEAVSTLVTGSSYDAMVYEMML
LGFGREEVVAALRVSFNNPDRAVEYLLSGVSTRDQGPAPGPDTTATPSSGAPAAPSGSVN
TPANTGSSPSATAGTNPLDFLRNQPQFQVMRQLIQQNPVLLPTLLQEIGRENPDLLQEIS
DHQEQFIQMLNEPIPDPAPTGGGGGPGGAGGVGGGTSGGGQMSYIQVTPQEKEAIERLKA
LGFPEGLVIQAYFACDKNENLAANFLLQQNFDDD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctggtaactctgaagacattacaacaacaaacatttaaaattgacatcgatgaggag
gagacggtgaaaatattaaaagagaggattgaaaaggagaaggggaatgacatcttttct
gttgcagcacagaaattgatctatgccggtaaaatcttaaacgatgacacgcctctcaag
gagtacaacattgatgagaagaactttgtggtgctaatggtgacaaagcccaaaatggcc
tcagccaccacacagacttcatcaacctcttcagctcccgtcaccacggctcctgcagct
cctcctgcagcccctcctgcagctttgtctagtttagagaatccagcagagccgacttcc
tccgacaacaagtcagaggacaaaacagaggtgacgccaccaagctctgacccattctcc
accagttttggcagtagcggaagccctgagacttcaccaaactcaaacttgataaatgaa
gctgtttcaactcttgtgacaggttcgtcgtatgatgccatggtatatgaaatgatgctc
ctgggcttcgggagagaagaagtagtggcagctctgagagtgagcttcaacaaccctgac
agggctgtggaatacctgctatcgggtgtgtcaaccagagatcagggtcctgcaccagga
cctgataccacggcgactccatcaagtggagctccagctgctccctccggaagtgttaac
actcctgccaacactggatcttcaccaagcgctacagcaggaaccaatcccttggacttc
ctaagaaatcagcctcagttccaggtgatgcgacagctgattcagcagaatcctgtcctg
cttccaacgttgctgcaggagatcggcagggagaacccagacctgctgcaggagatcagt
gaccaccaagaacagttcatccagatgctgaatgagccaattccagacccagctccaaca
ggtggcggaggaggaccgggtggagccggaggagtgggaggtggtacatctggtgggggt
cagatgagctatatccaggtcacaccacaggaaaaagaagctattgagaggctaaaagcc
ttgggttttccagaaggactcgtcatccaagcctactttgcttgtgataaaaatgagaac
ttggctgccaacttccttttacaacaaaactttgacgacgattga
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