Xiphophorus couchianus (Monterrey platyfish): 114149470
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Entry
114149470 CDS
T05908
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114149470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114149470
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114149470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
114149470
NCBI-ProteinID:
XP_027881172
LinkDB
All DBs
Position
8:complement(15558882..15588928)
Genome browser
AA seq
2842 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISDEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLTRNPRIFRDKSVLQQPLIQQ
YKISQNQVHGSPASNYQQSPSGCFTSPQCGSATQFVPQQNSPIPSPYTPQSPADYIQYNP
PSYSHQTQQVVSGARTILDSKISEHLSSNSSNRNSKPSLDEDYVNVAQRLGNEENYSSIK
AGIFSLSEERTKKPRPPLIMQSPPLEAGTDPDLLLTTADRKKKQRERNKEENENMDKNVF
YDIVSSPSKDSARLTLKLSRVKIPDTGRSEELLPTSPTDSDHNAVVLNNDIQSSGSPQDF
SHKSVVEEHQQDAAQPITKETGVISGIVFDDSEIDAFAEIERIDSANERERCSKEVQDKD
KPLKKRKQDTYPQEPGVETNEGPSLHGGSNVSRLTPKKSSAASNGASRPALMVSIDLKQA
GRVIGQPVVVLEQQPLCDDHIRRLKTSADTENRPGIIKKLPDTCQMHISDGHTESNKRKQ
NNQRESKRNHDSKLDCDKGHSEDRHVEMTRLKQDRHSDFRHKEEKNNSSHRSQVSRPETL
KSTSKVDRNSKHEEQKGKNKDKDKERDRQRDKDGDKEKLRDKEISRERDKDKVRDRERNR
ERDKSIDVAREEDKYQDKVKSKLRDGDKFRDGEEPIEREKFREEDKSRERAKDEDKDLEK
LKQKLRDRDKDGEKVRERDKSIDLDKNEDQDVERVKDKVRDKDKIRDKEKKRERDKFRER
DKDQERVKDNHRENVRGRDKSIDVVKDGDEDVDRIKDKVKDKNRDREKTGGKEKSREIDK
DREKDRDKNRNRDKDENFEVGKEQNKDGKRDRERDKGKDRDRNRDRDRERDREKNKKHKT
LPEGDGNRISFEEQTKAENSKLKQDEGRKSAELNDRQRTSSSSLQTTPNKDQRASGDSNM
NQAANKRQACEMKMSEFPPFLLGGNSGSLKNFVIPKLKRDGKEGTDKDLRLKGKLIDGWT
EPLVRLERVSLVKNLNKKTKPVIVVKRLSIEDVKRIIKETKNAHSSRSRHWASFDKSDRE
RADKRKHSMINKGSKYAEVDSDGSDEKDNGDEELESELEDESPRKRKKKDHDKSWKFEEK
KGSRDHRRSGGFQNSRRGSSGRHRDWSCNDDSDGDSPPPSLNDVARKIKKQKSKMAYDSK
MTTEEKMDSSAFKRFANNVDNILESLEDVDLTAEEDDEIPQELLLGKQQLNELGSDSTKI
KAMGVFNKFSSSKLVKILNMLEKNIQDSVTLSTLMSQDNDSMDEERLWRDLIMERVIKSA
DACLTALNIMTSPHMPKAVYIEDVIERVLQFTKFHLQNTLYPQYDRSYRADRHGGASHTS
KSKRPKSSAHKQKVVVGLYNKVCDIISVISELLEIQLLTDTTILQVSSLGITPFFVENVN
ELQLCAISVVTAVFSRYEKHRQLILEEIFASLARLPTSKRGLRNFRLNTSDSGGPPLYIQ
MVSALVLQLIQCVVNLPNERETEEEPKKKVDKDILITNSYEIAMRTAQNFLSVFLKKCGS
KQGEDDYRPLFENFVHDLLSAVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLD
YLGTVASNLRKDSLSCKMDQRTIDRILKETPGSDEVQQLQKALLNFLDENIDADPALLFA
RKFYIAQWYRDTTVEVEKAMKSQNDDDDPKYRRHSMDSDATGEIVQTVEARKKFLRKIIK
TTPSNFSSVKISSDTVDYEDSCLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKA
MKCLSEVVAVDPSILGRVDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDM
LIERILDTGISVRKRVIKILRDICLELPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQK
LWFSPTPSHDEEAMNRKILNITDVVLACKDSGYDWFEQLLQNLLKSEEDASYKPTKKACV
QLVDNLVEHILKYEESIADCEEKGINSGRVVACITTLFLVTKIRPILMVKHAMAMQPYLN
TKCNTQNDFMVICNVSKILELVVPLIENPSESFLNTIEGDLMKLIIKHGMTVVQHCVSCL
GAIVNKVTHNYKFVWACFNRFYGALAKLKTQHQENPSGSTLAANKPTLLRSLFTVGALCR
HFDFDQEEFKGANKIIIKDKVLELLLYFTTHEDEEVQIKAIIGLGFQFIMHPELMFAQDV
KVLYISLLSEENRAVNLKIHVLKNLQTYLQEEDSRMQEADREWNKQAKQEDLKEMGDISS
GMSSSIMQIYLKQVLESFFHSQSTVRHFALNVITLTLSQGLIHPVQCVPYLVAMGTDPEP
TMKNKADQQLVEIDKKYSGFIHMKAVAGLKMSYQVQQAINGGKRAAVRGFRHDDSDSALC
SHLYSMVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQTQEEPLFIMHH
IDITLSVSGSNLLQSFKECLRKEPVRHEKKVKTKKRKKKHSHKRNNSSDEDDDEEKSSST
SSSSSSSSSSSSSSSSDEEEEEVRKRKKPGGGDSDSDLGDEEAVMDRLPENTTPLQEFAS
ASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVHFNPRQTLEYLR
SDVANRNLSYETKRNIVKQFLDFKVLMEHLDRDEEDEDGGEANANARNKAINSLLKGPKP
QNHNHSNHTAPVETDDEESEDEDPPARKPRKDMDSADDTGQTVELMDIVAICRPKYKDRP
QIAKIVQKTRSGYSVHWMTGSYSGPWTVAKKRDGRKKVPWVDSIKESDIIYKKISLTSGQ
KLTNKVAQTLRALYAAKDGSKS
NT seq
8529 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctaacc
gacttactgaaccagctgcctttgccttcccctcttccggccaccactgctaagagcctg
ctctacaatggaaggatctccgacgaggtcagcagcctgttggtgtgtcgagacgagaat
ctggtgactcagctggcccatagccttaaccaggtctccacagaacacatagagctgaag
gacaacctgggaaatgatgaacctgagggtgatatgccaatacttcttcaaacgttgctg
accagaaaccccaggatcttcagggacaaaagtgtactgcagcaaccattaatacagcag
tacaagatttctcagaaccaagttcatggaagtccagcatcaaattatcagcaaagcccc
tctggatgctttacatccccacagtgtggctcagctactcagtttgtaccccagcagaac
agccccatacccagcccctacaccccccagagtcctgcagactacattcagtacaatcca
cccagttactctcatcagactcaacaagttgttagtggtgcgagaacaattcttgacagc
aaaatctctgagcatctgtcgagtaattcgtctaaccgtaactccaaacccagtttggat
gaagactacgtaaacgtggctcaaagactgggaaatgaggaaaattactcatccataaaa
gctggcatattttctctatctgaagagagaacaaaaaagcccaggcctcctcttatcatg
cagtcacctccacttgaggcaggcacagaccctgacctgctccttaccactgccgaccgt
aaaaagaagcagagagaaaggaacaaagaagaaaatgagaacatggacaaaaacgtcttt
tatgacatagttagctctccatctaaggactctgccagattgaccttaaaactgtcccga
gtgaagatcccagacacgggccgctctgaagaactccttccaacctcacctacggactca
gatcacaacgcggttgttttaaacaatgatattcagtcgtcaggttcccctcaagatttt
tcgcacaagtcagtggttgaagagcatcaacaagatgctgcgcagccaatcacaaaggag
actggggtcatcagtgggattgtgtttgatgactctgagatagacgcatttgctgaaatt
gaaaggatagactcagctaacgagagagagcgatgctctaaagaggtccaagataaagac
aagccactaaaaaaacggaaacaagacacgtaccctcaggaacccggagttgagacaaat
gaaggcccatctttacatgggggcagcaacgtcagcagactgacacccaagaagtcgagt
gctgcgagtaatggtgccagtcgacctgccttgatggtcagtattgatctgaagcaagct
ggaagagtaataggacagcctgtagttgtcttggaacagcaaccgttgtgtgatgatcac
atacgtcgccttaagacaagtgcagatactgaaaacagacctgggatcatcaaaaagctt
cccgatacctgccagatgcatatttctgatggacatacagaaagcaataaacgaaagcag
aacaaccagcgtgaatcaaagcgcaatcatgacagcaaacttgattgtgacaaggggcat
tcagaggacagacacgtggaaatgacgaggctgaagcaggacaggcattcagactttcga
cacaaagaggaaaagaacaatagcagtcacagatcccaagtcagcagacctgaaacgctc
aaatccacaagcaaagtggatcgcaactcaaaacatgaagaacagaaaggcaagaataaa
gacaaggataaagaaagggacagacagagagacaaagatggagacaaagaaaaactcaga
gataaagaaatatccagagaacgagacaaagacaaagtcagagatagagaaagaaacaga
gaaagagacaaatccatagatgtggccagagaagaagacaaataccaggacaaagtcaaa
agcaaacttagggatggagacaaatttagagatggagaagaaccaattgaaagagaaaaa
ttcagagaagaagacaaatctagagaaagagccaaagatgaggacaaagacctggagaaa
ctcaaacaaaaacttagagacagagacaaagatggagaaaaagtcagagaaagagacaaa
tccatagacctggataaaaatgaagaccaagatgtggagagagttaaagacaaagttaga
gataaagacaaaatcagagacaaagaaaaaaaacgagaaagagacaaatttagagaacga
gacaaagaccaagagagagtcaaagacaatcatagagaaaatgtcaggggaagagacaaa
tccatagatgtggtcaaagatggagacgaagatgttgatagaataaaagacaaggttaaa
gacaaaaacagagacagagaaaaaacaggaggaaaagaaaaatccagagaaatagacaaa
gatcgggagaaagacagagacaagaatagaaatagagacaaagatgaaaactttgaagtg
ggcaaagaacaaaacaaagatggcaagagagacagagaaagagacaaaggtaaagacaga
gacagaaacagagatagagacagagagagagaccgagaaaagaacaagaagcacaagacg
ctgcctgaaggagatggcaacagaatctcatttgaggagcaaactaaagccgagaactct
aaactgaagcaagatgaaggcagaaaatcagctgaactaaatgatcggcagagaacatcg
tcttccagcctgcagacaaccccaaacaaggaccaacgggcaagtggggatagtaacatg
aaccaagctgcaaacaaacggcaggcctgtgagatgaaaatgagtgagttcccgccgttc
ctgctggggggcaattctggaagtctcaagaattttgttattcctaaattgaaacgagat
ggaaaagagggaacagataaagatctccgactcaaaggcaaactaatagatggttggact
gaaccattggtgcggttagagagagtttcactggtgaagaacttgaacaaaaaaactaaa
ccagttattgtggttaagagactaagcattgaagatgtaaagaggatcattaaagaaacc
aagaatgcacacagctccagatccagacactgggcctcttttgacaaatcagacagagag
agagcagataagcgaaagcacagtatgatcaataagggatccaaatatgctgaagtagat
tccgatggctcagatgaaaaagacaacggtgatgaagagttggagtctgagttagaggat
gagtctccaagaaaaaggaaaaagaaagaccacgacaagtcatggaagttcgaagagaag
aaaggttctagggatcaccggcgaagtggaggctttcagaactctcgccgggggtcaagt
ggccgccatcgggattggagctgtaatgatgattcagatggagactcccctccaccgagc
ctgaatgatgttgcccgaaaaataaagaaacagaaaagcaagatggcatacgattccaaa
atgacaacagaggaaaagatggactcctctgcatttaagaggtttgcaaacaatgtggac
aacattcttgagagccttgaggatgtagacctcactgccgaagaagatgatgagatacct
caagagctgttgcttggaaagcagcaattaaatgagcttggcagtgattctactaagatt
aaagcgatgggcgtctttaacaagttttcttctagtaaacttgtgaaaattctgaatatg
ttggagaagaacattcaggacagcgtcacactttccaccttaatgagtcaagataacgac
tccatggatgaggagcgtttgtggcgggatctcatcatggagagggtgatcaagtctgca
gatgcctgtttgactgcgctcaacataatgacgtccccacacatgccaaaggctgtttat
atagaggatgtgattgagagggtgttgcagttcaccaagttccacctgcagaacactttg
tacccgcagtatgaccgttcttacagggcggatcgccatggaggtgcctcacacacttca
aagtccaagagaccaaaatcttctgcccacaaacagaaagtggtggtgggattgtacaac
aaggtttgcgacattatcagcgtcatctcagagctccttgaaatccagctgctcactgac
accacaattctccaggtgtcgagcctcggaattacacctttttttgtggagaatgtcaat
gaactgcagctatgtgccatctctgtagtgacagcagttttctctcgctatgagaagcac
aggcagctcattctggaagagattttcgcctctcttgctagacttcccaccagtaaacgt
ggcctccggaactttaggttaaacaccagtgattcaggtggacccccgttgtacatccag
atggtctcggctctcgttcttcaactcattcagtgtgtggttaatcttccgaatgagaga
gaaactgaggaggaaccgaaaaagaaggtggataaagatatcctcattaccaactcttat
gaaattgccatgagaacagcacagaactttctctctgtgtttctcaagaaatgtggcagc
aaacagggagaagacgactacaggcctctgtttgagaacttcgttcatgacctgctgtcg
gctgtcaacaagcccgagtggcctgctgctgaactgctgctcagtttattgggcagactg
ctggttcaccagttcagcaataagcagacagaaatggccctcagggtggcgtcgctcgac
tacctcggcactgtagcctcaaacctgcgtaaagactcactctcttgcaagatggaccaa
agaactatcgatcgcattcttaaagagactcctggcagtgatgaggtacagcagctccaa
aaggctttgctaaacttcctggatgaaaacattgatgcagatccagctttattgtttgca
aggaaattttacattgcccagtggtacagagacaccacagtagaggttgaaaaagctatg
aagtctcaaaacgacgacgacgatccaaagtatcggcgacattccatggatagtgacgca
accggggagattgtacagacggttgaggcacggaaaaaattcctccgcaaaatcatcaag
acaacgccatcaaacttcagctccgtaaagataagctctgacacagtagactatgaggac
tcctgtctgattgtaagatatctggcctctatgaggccatttgcgcaaagctttgatatt
tatttatcacagattctgagggtcctgggagagagtgctattgcagtgagaactaaagcc
atgaagtgtttgtcagaggtggtggctgtggatccaagcatactaggaagagtggacatg
cagcgtggggtgcattgtcgtcttatggacaactccactagtgtccgagaagcagccgtg
gagcttcttggccgcttcgtactcagtcgccctgagctcatcgagcagtactatgacatg
cttattgagaggatactggacacaggaatcagtgtgagaaaaagagtcattaagattctt
cgagacatttgcttggagctcccagatttccacaagataacagaaatgtgtgtcaggatg
atccgcagagtcaatgatgaggaagggatcaagaaactggtaaatgagacattccagaaa
ctctggttttcccccacacccagtcacgatgaagaagccatgaacagaaagatcctgaac
atcacagacgtggtgttggcgtgcaaagattcaggctacgattggtttgagcagcttttg
caaaatctgctgaaatcagaggaggatgcttcatataaaccaactaagaaggcctgtgtt
cagctggtggacaatttagtggaacatatactaaagtacgaggaatctattgcagactgt
gaagaaaaggggataaactcaggtcgtgttgtagcttgcatcaccactctctttctggtt
actaaaatcaggcctatcctaatggttaaacatgccatggctatgcagccctacttgaac
actaaatgcaatactcagaatgacttcatggtgatttgcaatgtgtccaagattctggag
ctcgttgttcctctgattgagaatccaagtgagtctttcctcaacacgattgagggagac
ctgatgaagctcattattaagcacggcatgacggttgtgcagcactgtgtgagctgtctt
ggtgctattgtgaacaaggtcacacacaactacaagtttgtgtgggcttgtttcaatcgc
ttctatggagctctggctaaactcaagacgcagcaccaggagaaccccagcggctccact
ctggctgctaacaaaccaactctgctgcgctcactgttcaccgtgggggctctttgtcga
cactttgatttcgaccaagaagagttcaagggagctaacaagatcatcataaaagacaag
gttttggagcttctactgtatttcaccacccatgaggatgaagaggtgcagatcaaggcc
ataattggtctagggttccagttcatcatgcacccagagctcatgtttgcacaagatgtg
aaggttctttatatcagcttgctgtccgaggagaacagggctgtcaatctgaagatccat
gtgctcaaaaatcttcaaacatacctgcaggaggaggactctcgaatgcaagaggccgac
cgtgaatggaacaagcaagcgaagcaggaagatcttaaggagatgggcgacatctcgtca
ggcatgagcagctctattatgcagatttacctcaagcaggtgctggagtccttcttccac
tcacagtccactgttcggcactttgctctgaacgtcatcacactgactctcagccagggc
ctcatacaccctgtacagtgtgtcccctacttggttgcgatgggaacagatccagaacca
accatgaagaacaaggcagaccaacaactagtggagattgacaagaaatactcaggattc
atacatatgaaggctgttgctgggttgaagatgtcttatcaggtgcagcaggccataaat
ggagggaaacgtgcagcggtccgaggtttccgacacgatgactcggactcggccctttgt
tctcatctctactctatggtccgtgggaacagacaacacagacgagctttcctcatctcc
ctgctcaacctgtttgatgacagctctaaaacagaggtaaacatgctgctgttcatagct
gacaacctggcatgcttcccttatcaaacccaggaggaacctcttttcatcatgcatcat
atagacattactctgtctgtctctggcagcaacctactccagtctttcaaagagtgttta
cggaaagagcctgtaagacatgaaaagaaggtaaagacaaagaagagaaaaaagaagcat
tctcataagaggaacaacagctcagatgaggacgatgatgaagagaagagcagcagcaca
tccagcagcagcagcagcagcagcagcagtagtagcagcagcagtagcgatgaagaggag
gaggaagttcggaagcgaaagaagcctggaggcggtgactctgactcagatctgggcgat
gaagaagcagtgatggaccgcctgcctgaaaacaccacccctctgcaggagtttgccagt
gcttcacaggggatcctgctattgctggtgctcaaacaacacctaaagaatctgtatggc
ttctcagacagcaaaatccagaagtactcgccgacggagtctgccaaagtttatgacaag
gcagtgaacaggaaatctaaggtgcatttcaaccctcgtcaaactctggaatacctgagg
agtgatgtggccaacagaaacctcagctatgaaactaagaggaatattgtcaaacagttt
ttggatttcaaggtgctgatggagcacttggatcgtgatgaagaggatgaggatgggggc
gaagcaaatgctaatgccagaaacaaagccatcaattcgctgctgaagggtccaaaaccc
caaaatcacaaccacagtaatcacactgctccagtagagacagatgatgaggagagtgag
gatgaagatcctcctgcgcggaaaccaagaaaagacatggattctgctgatgacacgggt
cagacggtggagctaatggacatcgtcgccatctgtcgccccaaatacaaagacagaccg
cagattgccaagatcgtccagaagaccaggagcggctacagtgtacactggatgacggga
tcttactctggaccgtggactgtggcgaagaaacgggacggtcgcaaaaaggtgccttgg
gtcgacagcatcaaggagtcggacattatttacaagaaaatctccttgacgagcggacag
aagctcacgaacaaagtggcacagacgttacgagcgctgtacgcggccaaggatgggtca
aagagttaa
DBGET
integrated database retrieval system
