Xiphophorus couchianus (Monterrey platyfish): 114149487
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Entry
114149487 CDS
T05908
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114149487
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114149487
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Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
114149487
NCBI-ProteinID:
XP_027881197
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Position
8:25074534..25129764
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AA seq
1129 aa
AA seq
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MMAERVQQPPAKRLCCRPGFGATCRQGQRAAGALCGGSQGESSRTQSPESLLDIAARRVA
EKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGEEVGSGGESGDETR
LPFRRGVALLESGCVDNVLQVGFHLSGTVREPATSSEPELLCNVSVSFDRCKITSVTCGC
GNKDIFYCAHVVALSLYRVRKPEQVKLRLPISETLFQMNRDQLQKFVQYLITVHHTDVLP
TAQKLADEILSQNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHGS
GKQLNLLFSKVREMLRMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDEL
GALWMCIVLNPHCKPEQKPAWLRQLRRWNGVDVCPLEDGNHGSELINLTNALPQGPPGNP
DALTRPHRTVFTRAIEACDLHWQDPHLQHVITEDHYNNYCYHDNLNGSLFDSRGWPLWHE
HVPTACARVDALRSHGYPKEAVRLAIAIVNTLRRQQQKQLELFRGHRKELLHRGVTSITN
LEGWVGHPLDPIGTLFATLMETGRGSDDGATADFPGSLGPCRRPENPVYTPLPLLEEGES
FVALAVETALMGLGQQRAMPDGLYAQEKVCRNEEQLLAKLQEVDLDEALVKILRKQAALL
LEAGPYSGLGEVLYRESVPMHTFAKYLFTSLLPHDAELAYSIALRAMRLPVLESTPPSTD
LSRPQHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDACKLHTVLESIQKNIHSS
SHIFKLAQDAFKIATLMDSLPDLTLLKVSLELGLQVMRLTLSTLNWRRREMVRWLVTCAT
EVGVFALDNIMQNWFTLFTPTEATSVVASTIMSNSTIVRLHLDCNQQEKLSNSARTLALQ
CAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAATGMNYTQLFTIARYMEHRGYPMRA
YKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLSD
ILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYS
EFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagcgcgtgcagcagcccccggccaagcggctctgctgtcggccgggcttc
ggcgcaacatgtaggcaaggccagcgggccgctggggctctgtgcggcggctcccagggc
gagtcgagccgaacccagagcccggagtctctcctggacatcgcggcgaggagagtcgcg
gagaagtggccgtttcagcgggtggaggagcgcttcgagcggatcccggagcccgttcag
agacggatagtgtactggtccttcccgaggagcgaacgggaaatctgcatgtactcgtcg
ttcaacaccggcggcggggaggaagtcggaagtggcggcgagagcggcgacgagacgcgg
ctgccgttccgacgcggcgtcgctctgctggagagcggctgcgttgacaacgtattgcaa
gtcggtttccacctcagcgggacggtccgggaaccggccacgtcctccgagccggagctg
ctgtgcaacgtcagcgtcagcttcgaccgctgcaagatcacgtcggtgacgtgcggctgc
ggcaacaaggacatcttctactgcgcccacgtggtggcgctctcgctctaccgggtacgg
aagcccgagcaggtcaagctgcgcctgcccatctcggagacgttgttccaaatgaacagg
gaccagctgcagaagttcgtccagtacctgatcacggtgcatcacacggacgtgctgccg
acggcgcagaagctggccgacgaaatactgtcgcagaactccgagatcaaccaggtgcac
ggagctccagatccgacggcgggggcgagcgtggacgacgagaactgttggcatttggat
gaggaacaggtccaggaacaggtcaagctctttctctcccagggcgggtaccacggctcg
ggaaagcagctcaacctgctgttcagcaaggtgagagagatgctgaggatgagggactcc
aacggcgctcgcatgttgacgctgatcacagagcagttcatgggcgacccccgactggcg
ctgtggaggcaacaggggaccaccatgaccgacaagtacaggcagctgtgggatgagcta
ggcgccctgtggatgtgcatcgtcctgaacccgcactgtaagcctgagcagaagcctgcg
tggctccggcagctccgcaggtggaacggcgtggacgtgtgtcccttggaggacggtaac
catggcagcgagctgatcaatctgaccaacgctctgccccaggggcctcctggcaatcca
gacgctctgacgcgccctcaccggaccgtcttcacgcgcgccatcgaggcctgcgacctg
cactggcaggacccccacctgcagcacgtcatcaccgaggaccactacaacaactactgt
taccacgacaacctcaacggctccctcttcgactccagagggtggcccctgtggcacgaa
cacgttcccacggcatgcgcccgagtggacgccctgcggtcacacggttaccccaaagag
gctgtgcggctggccatcgccatcgtcaacacgctgcggcggcagcagcagaagcagctg
gagcttttccgcggccacagaaaagagctgctccacaggggcgtaacatccatcaccaac
ctggagggctgggtgggccaccctctggaccccatcggcactttgttcgccacccttatg
gagacgggacgggggagcgacgatggtgccaccgccgacttcccaggctccctgggcccc
tgcaggaggccggagaaccctgtttacacgccgctgcctctcctggaggaaggcgagtcg
tttgtggcgctggctgtggagacggcgctgatgggcctaggccagcagagggcgatgccg
gacggcctctacgcccaggagaaggtgtgtcgcaatgaagagcagctactggccaagctc
caggaagtagacctggacgaggcgctggtgaagatcctccggaagcaggccgcgcttctg
ctggaggccggtccttacagcggtctgggggaagtcctctacagagagagcgtccccatg
cacacgtttgccaagtatctcttcacctccctgctacctcacgacgccgagctggcgtac
agcattgcactcagggccatgaggttgccagtcctcgagtccacgcccccttcaactgac
ttgtctcggcctcagcacatagtgtccgtggtgcccaatcgctaccctcgctggttcacc
ctgagccacatagagagccagcagtgtgaactggcctccaccatgctcacagctgccaaa
ggtgacgcctgcaagctccacacagtgttagagtccatccagaagaacatccactcttcc
tctcacatcttcaagctggctcaggacgccttcaagatcgccacgctgatggacagcctg
ccggacctcacgctgctcaaggtctccctggagctgggcctccaggtgatgaggttgacc
ctgtccacgctgaactggcggcggagagagatggtgcgctggctcgtcacgtgcgccact
gaagtcggtgtctttgctctggacaacatcatgcagaactggttcacactcttcacaccg
acagaggcgaccagcgtggtggccagcaccatcatgtccaacagcaccatcgtccgcctg
catctggactgcaaccagcaggaaaaactgtccaactccgctcgcaccctggcgctacag
tgcgccatgaaggacccccaaaactgtgccctgtccgccctgacgctctgcgagaaggac
cacattgccttcgagacagcctaccagattgtactggacgcagccgccacaggaatgaac
tacacccagctgtttacaatagcacgctacatggagcaccgcggctatcccatgagggcg
tacaaactagcaacgttagccatgacgcaccttaacctcagttacaaccaggacacgcac
ccggccatcaacgacgtgctctgggcgtgcgcccttagccactcgctggggaagaacgag
ctggcggctgtcattcccctggtggtgaagagcgtgaagtgcgccaccgtgttgtcggac
atcttgaggcggtgcacgcttacgacgccgggcatggtggcgctgcacagccgcaggaac
tctgggaagctgatgtctttggacaaggctccgctcaggcagctgttggacgccaccatc
ggggcctacatcaacacaacgcactctcggctgacgcacatcagcccgcgccactacagc
gagttcatcgagttcctcagcaaggccagggagacgtttctgatggcgcacgacggacac
atccagttcacgcagttcatagacaacctgaaacagatctacaagggcaagaagaagctc
atgatgctcgtgcgagagaggttcggttga
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