Xiphophorus couchianus (Monterrey platyfish): 114149512
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Entry
114149512 CDS
T05908
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114149512 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114149512 (ogg1)
Enzymes [BR:
xco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
114149512 (ogg1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114149512 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
114149512
NCBI-ProteinID:
XP_027881259
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Position
1:complement(19681821..19686198)
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AA seq
388 aa
AA seq
DB search
MAKHAVLSSGAKLWRSLPCAKSELRLELTLACGQTFRWRETAEGHWTGVIGGRVWTLTQT
EDTLWYYVYTHQSGAGGENSSEDSLRAESVSASHHSEVEAEMLRDYFQLHVKLGDLYKEW
GAADSHFKKISDIFTGVRMLRQDPIECLFSFICTSNNHISRIQGMVERLCQTLGSPLCQL
DQTSYHDFPTLSALADSGVEERLRDLGFGYRARFLQQSAKQILDTHGPQWLVGLRNVPYL
EARDSLRTLPGVGTKVADCVCLMCLDKCEAVPVDTHVWQIAKRDYKYTSDNGQKTLTEKV
HRDIGDFFRKLWGPYAGWAHSVLFCGDLKKFQNLKEMTGLKQPKNEEEHERECKGLKIKR
EFDLHQKKKKPKSERQKKAKMSVKTEEV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtgttgtcttcaggggccaaattgtggcgatctttgccatgcgca
aagtcggagctgcgactggagctcacccttgcttgtggacaaactttccgctggagagaa
accgcagaggggcactggactggagtcataggggggcgtgtttggaccctgactcaaaca
gaagacactctttggtactatgtgtacacacaccagagtggagctggtggagaaaacagc
tcagaagactctctgagggcagagtctgtcagtgcctcgcaccactctgaggtggaagca
gagatgctgagagactacttccagttgcatgtgaagctgggggatctatacaaggagtgg
ggtgcagcagactctcacttcaagaagatttctgacatctttacaggtgtgcggatgttg
cgtcaggaccccatagaatgccttttttccttcatttgcacttccaacaaccacatctcg
cgtattcagggcatggtggagagattgtgtcagactctggggagccctctctgtcagctg
gatcaaacctcctaccatgactttcccacactgtccgcactggcagacagcggtgtagag
gagcgtctcagggatctgggctttggctacagagctcggttccttcagcagagtgctaag
cagatcctggacacacacgggccccagtggcttgttggtttacgaaacgtcccatatctg
gaggcccgtgattctctccgaaccctccctggagttggcaccaaagtggcagactgtgtt
tgtctgatgtgtctggataagtgtgaggccgttcctgtggacacacatgtttggcagatc
gctaagcgggactataagtatacttctgataacggacaaaagaccctcacagaaaaagtt
cacagagatataggggattttttcagaaagctgtgggggccatatgcaggttgggcccat
tcggttttattctgtggtgacctcaagaagtttcagaacctcaaggaaatgacaggttta
aagcagccaaaaaacgaagaagagcatgaacgagagtgcaagggactaaaaataaagaga
gagtttgatttgcatcaaaaaaagaagaaacccaagtcggaacgtcagaagaaggcaaag
atgtccgtcaagacagaagaggtgtga
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