Xiphophorus couchianus (Monterrey platyfish): 114149519
Help
Entry
114149519 CDS
T05908
Name
(RefSeq) ankyrin-1-like isoform X1
KO
K10380
ankyrin-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114149519
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
114149519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
UPA_2
ZU5
ANK_LRRK2
Death
Ank_KRIT1
bDLD3
Motif
Other DBs
NCBI-GeneID:
114149519
NCBI-ProteinID:
XP_027881281
LinkDB
All DBs
Position
8:11403818..11482935
Genome browser
AA seq
1914 aa
AA seq
DB search
MAQAAKQLRKTKDLAEAAAQEQREKEEEKIKKRNRSRDRRRKADAATSFLRAARSGNLDK
ALDHIKNGIGINISNQNGLNGLHLASKEGHVKMVLELLHSGIELEATTKKGNTALHIAAL
AGQEKVVAELVNYGANVNAQSHKGFSPLYMAAQENHLEVVKFLLENGANQSLPTEDGFTP
LAVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGF
TPLHIAAHYENMSVAQLLLNRGANVNFTPKNGITPLHIASRRGNMMMVRLLLDRGAQIDA
KTKDELTPLHCAARNGHVRVIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQLLQY
NAEIDDITLDHLTPLHVAAHCGHHRMAKVLLDKGAKANARALNGFTPLHIACKKNHMRSM
DLLLKHSASLEAVTESGLTPLHVAAFMGHLNIVKNLLQRGASPNASNVKVETPLHMASRA
GHCEVAQFLLQNAAQVDAKAKDDQTPLHCAARMGHKELVKLLLEHKANPDSATTAGHTPL
HIAAREGHVHTIRILLDAGAQQVKMTKKGFTPLHVASKYGKVDVAELLLERGANSNAAGK
NGLTPLHVAVHHNNLDVVKLLVSKGGSAHSTARNGYTPLHIAAKQNQVEVASVLLQNGAS
PNAESLQGITPLHLASQEGRPDIVALLISKQANVNLGNKNGLTPLHLVAQEGHVGIADTL
VKQGASVYAASRMGYTPLHVACHYGNIKMVKFLLQQQAHVNAKTRMGYTPLHQAAQQGHT
DIVTLLLKHGAMPNEITSNGTSPLGIAKRLGYISVIDVLKLVTEESVSAMTTEKHRMSFP
ETVDEILDVSEDEGVCQLTLGDELLGLDGARYLKLDDFKDQDDDFLSPKKTLRDFEGGTG
TTPYSPAIPRIPCVSPETVQLDQHTPIPLPKEYDEDSLIPSSPATETSDNVSPVASPIHT
GFLVSFMVDARGGSMRGSRHHGLRVIIPPRTCAAPTRITCRLVKPQKLTTPPPLVEGEGL
ASRIISLGPSSMQFLGPVIVEIPHFASLARGDRELVVLRSENGSVWKEHRNRYGDEVLET
ILNGMDEDLESQEELEKKRIRRIISTDFPLYFAVVSRIQQESDLIGPEGGRLTSKLVPHV
EAIFPETAVTKRVRLGLQAQPIPDELLTRQLGNQATFSPVVTIEPRRRKFHRPIGLRIPL
PPSWRESPRDAGEGDTTSLRLLCSVIGGTAPAQWEDITGTTKLMYASNCASFTTNVSARF
WLADCPRTAEAVTFANLLYKELMAVPYMAKFVIFAKMNEAREGRLRCYCMTDDKMDKTLE
LHENFSEVARSRDIELMEGMPLHLECSGNLVPIRKATQQPRSFSFQAFRDNRLPVSVKVR
DSNKEATGFLSFLRKCTKYEDSQHVLCNLNITMPPCVKVAGSEERRRTLTPLALRERYSA
LNEPGVASVNAMERTEIKINIISDQLGLSWAELARELQFSVDDINRIRVENPNSLLDQSS
ALLNLWLSREGKRAKMESLYTALKNIDRADIVSSLEGQAPQQGPGLSEEGACRLADRDST
LLSPSVINEITDTRPSRIVHKPRVIRPPFFRRGYGLVQEELVSPASMQYSLPSPLGVEPY
WQEVSSLECAPIATTEEDTLMEMSDVQVWPAGVSPSLVTVEDSSLDGSSRADDSEGATLS
LPCSLGRPSSGASGASGSIMELEEEEEEEGEVEEEEVPQEPASALAELDRVRASGAVPKV
NLNGQAGGQRSDARRGDGVAVGGGTKGGVGGVGLGSVEGISLVAGQQVYAQHGEMTGLRP
PEHNGDNRMVGGGAFQPYLPDKDSLQGWVGSASSGHDGSVPGLHTAQETLLTPETGQQAW
EQEQRRGQKEEKADFSAEGKFVEERGIALSRKVGMDVRKGAQSLQRTSLRRVKH
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagctgccaagcagctccgcaagaccaaggacctcgcagaggccgccgcccag
gagcagcgggagaaggaggaggagaagatcaaaaagaggaatcgatccagagaccgcaga
cgcaaggcggatgcagccaccagtttcctacgtgcagctcgatcagggaacctggacaag
gccctggatcacatcaagaacgggataggcatcaacatctctaatcaaaatggtcttaat
gggttacacctggcctctaaagagggccatgtcaaaatggttttggagctgctgcactct
ggcattgaactggaagcaactaccaagaaagggaacactgctctccatatcgcggctctg
gcagggcaggagaaagtggtggctgagctcgtcaactacggtgccaatgttaatgctcag
tcacataaaggcttcagtccgctctacatggctgcacaggagaatcatttagaggtggtc
aagtttctgcttgagaacggtgcaaatcagagtctcccaactgaggatggcttcacgccc
ctcgcggtggccctccagcagggccatgaaaacgtcgtggcgctgctcatcaactacggc
acgaaggggaaggtccgccttccagcacttcacatagctgcacgaaacgacgacactcgc
actgcagctgtcctcctgcaaaatgatcccaaccccgatgtacttagcaagactggtttc
accccgctacatatcgcagctcactatgaaaacatgagtgtagcgcagctgctgctaaac
agaggagcaaatgtaaacttcacccccaagaatggaatcacacctcttcatatagcctcc
aggaggggcaacatgatgatggtcagattactactggacagaggagctcagatcgatgcc
aaaacaaaggacgagctgactcctcttcattgtgcagcccggaacggtcatgttcgcgtt
attgaaatcctcctggaacacggtgctcccatccaggctaaaactaagaatggtttgtcc
ccaattcacatggcagctcagggggatcacatggactgcgtcaggcagctactgcaatac
aatgctgagattgacgatatcacactggaccatctaaccccgcttcatgtagcagcccac
tgcggtcaccatcgcatggccaaagtccttctggacaaaggagccaaagctaatgctcgt
gctctgaatggcttcacacctcttcatattgcttgcaagaagaaccacatgaggtcaatg
gacctgctgttaaagcactctgcttccttggaagctgtcacggagtcgggtctcactcct
cttcatgtagcagcattcatgggccatctaaacatagtaaagaacctgctccaaagaggg
gcttcacctaatgcttccaatgtgaaagtggagacccccctccatatggcctccagagca
gggcactgtgaagtggctcagttcctgctacagaatgcagcacaagtggatgcaaaggca
aaggatgaccagacacccctacactgtgcggctcggatgggccacaaggagttggtcaag
ctgctcctagagcacaaggctaaccctgactcagcaacgactgcaggtcacacgccttta
cacatcgctgcacgtgaaggacacgtccacaccatacggatattattagacgcaggagct
caacaagtaaagatgacaaagaaaggtttcactcctctccatgtagcttctaaatatgga
aaagtggatgtagcggagcttcttctggaaagaggcgccaattcaaatgcagcagggaaa
aacggtctgacaccccttcatgtggcggtgcatcacaacaacctggatgttgttaaactc
ctggtcagcaagggaggatctgcacacagcactgcccgaaacggttacactcctctgcac
atagctgccaagcagaaccaggtggaggtggccagtgttctgcttcagaatggagcgtcc
ccaaatgcagagtccctccaaggcatcacgcccttgcacctggcttcacaggaggggcgg
cccgatattgtggctctgctcatctccaaacaggcaaatgtaaacctaggaaacaagaat
ggactgactcctttgcatctcgtagctcaggagggtcatgtgggcatcgcagacactttg
gtcaaacagggcgcatccgtttatgctgcttcacggatgggctataccccactccatgtg
gcctgtcactatggaaacataaagatggtgaagtttcttctgcagcagcaggctcatgtg
aatgccaaaacaaggatgggctacacccctctgcaccaagcagctcaacagggccacact
gacattgtgactttgctactaaaacatggagccatgcctaatgagatcacatcaaatggg
acatctcctcttggcatcgctaagcgattgggttatatttctgtcatcgatgtgctaaag
ctggttacagaggagtctgtttccgctatgaccacagagaagcatcggatgagctttcct
gagacagtagatgaaattttggatgtttctgaagatgaaggagtttgccagctaacttta
ggagatgaattgctcgggctggatggagcacgctatttgaaacttgatgacttcaaagac
caggatgatgattttctctccccaaagaaaaccctcagagattttgagggtgggacggga
accacgccatactcccctgctattcccaggattccttgtgtgtccccggagacagtgcag
ctcgaccagcacacgcccatccctttaccaaaagagtatgatgaggattctcttatcccg
agtagtccagctacagaaacctcagacaatgtcagccctgtggccagccccattcacaca
gggtttctggtgagtttcatggtggatgcacgtggaggttctatgcgaggaagcaggcac
cacggcttgcgggtgatcatccctccccgcacctgcgccgcaccgacacgcatcacctgc
cgtcttgtgaaaccccagaaactgacgacgcctcctccactggtagagggagagggcttg
gctagtcgcatcatctccctgggaccctccagtatgcagtttctggggcctgtcatagtg
gaaatcccccactttgcctcattggcccgtggggaccgggagcttgtggtcctacgaagt
gaaaacggctccgtttggaaagagcatcgcaatcgctatggagatgaagtgctagaaacc
attttgaatggcatggatgaagacttggagagtcaagaggagctggagaagaagaggata
cgtcgaatcatctccaccgacttccccctctactttgctgtagtctctcgcattcagcag
gaaagtgatcttatcggccctgaaggtggccggctcaccagcaagctggtgccccatgtg
gaagcaatcttccctgagacggctgttaccaagagagtgaggctgggattgcaggcacaa
ccaatccctgatgaactgctaactaggcagctgggaaaccaggcaaccttcagcccggtg
gttacaatcgaaccccggcggcgcaagttccaccgtccaattggtctgcgcattccttta
cctccatcctggagggaaagtccacgtgatgcaggggagggagacaccaccagcttgcgc
cttctctgcagtgttataggtggaacagctccagctcagtgggaggacattactggaacc
accaagctgatgtacgcgagtaactgtgccagtttcaccaccaacgtgtctgcaagattc
tggctggcagactgtcctcgtacagcagaggcagtgacctttgccaacttgttgtacaag
gagctcatggcagtcccatacatggccaaatttgtcatttttgcaaagatgaatgaagct
cgggaaggtcgattgcgttgctactgcatgacagatgacaagatggacaagactctggaa
ctgcacgaaaacttctcagaggtggcccgaagtcgagacatcgagcttatggagggcatg
ccgctgcacctggagtgttctgggaatttagtgcccatccggaaggccactcagcagcct
cgcagcttcagcttccaggccttcagagacaacagactgcctgtttctgtcaaggtcagg
gatagtaacaaggaagccactgggtttctgtcttttctgaggaaatgcacaaagtacgag
gactcgcaacatgtcttgtgtaaccttaatataactatgccaccttgtgtcaaggttgct
gggagtgaggaacgcaggcgaactttaacccctctggccctgagagagcgctacagtgca
ctgaacgagcccggtgtggcttcagtgaacgccatggagagaactgagatcaaaatcaac
atcatatctgatcagctaggcttaagctgggcagagttggcgcgagagcttcagtttagt
gttgacgacatcaacaggatccgtgtagaaaatccaaactcccttttggaccagagctcc
gccctgctcaacctgtggctcagcagagagggcaaaagggccaaaatggagagcttgtac
acagctctgaagaacattgaccgcgcagatattgtgtcttcacttgagggtcaggcccca
caacaggggcccgggttgtcagaagagggggcctgtcgtctggctgacagagactctaca
ttgttgtctcctagtgtcattaatgagatcacggacacaaggccttcacgcatagtgcac
aagccgagagttattagacccccgtttttcagaaggggatatgggctggtgcaggaggag
cttgtgtccccggcctccatgcagtacagcttgccctctccattgggtgtggagccatac
tggcaggaagtttccagcctggagtgtgcgcccattgccaccacggaggaagacacacta
atggagatgtcggatgttcaggtgtggccagcaggggttagcccctcgctggtcacagtt
gaggactcatcgctagatggtagcagtcgagcagatgactctgagggtgcgacgctttcc
ttgccctgcagcttgggccgtccaagcagcggagccagtggggccagtggttccatcatg
gagctggaggaagaggaggaggaggagggggaggtagaagaggaggaagtgccacaagag
ccagcgagtgcactggcagaactggacagggtgagggccagtggcgctgttccaaaggtc
aatctgaatgggcaagcgggaggtcagaggtcagacgcaaggagaggggacggtgtggcg
gtgggaggaggaactaaaggaggagttggtggtgtggggctgggctcagtggaagggatt
tctcttgttgcaggccagcaggtgtatgcccagcatggtgagatgactgggctgaggcca
ccggaacacaatggggacaaccggatggtgggaggtggagcatttcagccatacttacca
gacaaggactccctgcagggctgggtgggctcggcatcatcaggacatgatggaagtgtg
ccaggcttgcacacagcccaggaaaccctactgactccggagacgggccaacaagcttgg
gagcaggagcagaggcgaggccagaaagaagagaaagcggacttctctgctgagggaaaa
tttgttgaagaacgcggaattgcgctctctagaaaagtggggatggatgtaagaaagggt
gctcagtcattgcagcgcaccagtctccggagagttaaacactga
DBGET
integrated database retrieval system
