Xiphophorus couchianus (Monterrey platyfish): 114149658
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Entry
114149658 CDS
T05908
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
xco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114149658
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114149658
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114149658
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114149658
03036 Chromosome and associated proteins [BR:
xco03036
]
114149658
03400 DNA repair and recombination proteins [BR:
xco03400
]
114149658
Peptidases and inhibitors [BR:
xco01002
]
Metallo peptidases
Family M67
114149658
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114149658
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
114149658
BRISC complex
114149658
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
114149658
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
114149658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
114149658
NCBI-ProteinID:
XP_027881484
LinkDB
All DBs
Position
8:3271178..3272352
Genome browser
AA seq
311 aa
AA seq
DB search
MTSLQNHPGPDGGAEAQRAKTKSSNPEVRVRLGAVLFSSLLGVRNLCFLLKMAVSAVHLE
SDAFLVCMNHALSTEKEEVMGLCIGEVEASRIVHIHSVIILRRSDKRKDRVEISPEQLSA
ASTEAERLADSTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQCFVGLIFSCFIE
DKNTRTGRVLYTCFQSAQAQKGSEYERVEIPVHVVPREAIGKACLESAVELPRILCQEEQ
DTYRRIHGLSHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLQQNRQSIAELQRE
KERLQRELGAL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactgcagaaccatcccggaccagatgggggcgctgaagcacagcgagctaaa
acgaagtcgagcaacccggaagtgagagtgcgtcttggtgctgttttgttttcttctctt
cttggcgtcagaaacttgtgttttctgttgaaaatggccgtcagcgcggttcacctggag
tctgacgccttcctggtgtgcatgaaccacgcgctgagcaccgagaaggaggaggtgatg
ggtttatgcatcggggaggtggaggcgtcccggatcgtccacatccactcggtgatcatc
ctccgccgctccgacaagcggaaggaccgggtggagatttccccggagcagctgtccgcc
gcctccaccgaggcggagcggctggcggactccaccggcagaccgatgcgggtggtgggc
tggtaccactcccacccgcacatcacggtgtggccgtcccacgtcgacgtgcggacccag
gcgatgtaccagatgctggaccagtgcttcgtggggctcatcttctcctgcttcatcgag
gacaagaacaccaggacgggccgcgtcctctacacctgcttccagtccgcgcaggcgcag
aagggctctgagtacgagcgagtggagattcccgtgcacgtggtgccgcgagaggcgatc
gggaaggcgtgcctggagtccgccgtggagctgccgcggatcctgtgccaggaggagcag
gacacgtaccgccggatccacgggctgtcccacctggacccggtcaccaagatccacaac
ggctcggtgttcaccaagaacctgtgcagccagatgtccgccgtcagcgggccgctgctg
cagtggctggaggaccggctgcagcagaaccgccagagcatcgcggagctccagcgggag
aaggagcggctgcagcgggagctgggtgcgctgtga
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