Xiphophorus couchianus (Monterrey platyfish): 114149743
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Entry
114149743 CDS
T05908
Name
(RefSeq) iporin-like
KO
K23291
iporin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114149743
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
114149743
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RUN
DUF5773
Motif
Other DBs
NCBI-GeneID:
114149743
NCBI-ProteinID:
XP_027881592
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All DBs
Position
8:13714367..13726037
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AA seq
1168 aa
AA seq
DB search
MIGASTLPGHTLLACHFPVVQLPTWQLPVQALCSSAKRPSRLCSSGLTRAVSLPEQDTLT
REHCFTGGRRPFSSSYSSLREDRVEEEGTSDSSGRYDSNSSPEETGSINKEESCGAATTQ
RSHNSFLPNPDLDEDEEDEDSDGDNLHRYREDSSFVLHGNSNWSLNNGGNDALLHEDLDS
EWINEGLMLGMGRNQHWLSNQMDLLQSGCQGFAVNRSGIALLTCLEQDSDRLQENIYREH
KCSPEQLPNIHTEDVSDSSCNSSDGVLVNFCTIYNKSNNPATPQDLSSPAVDPCHSSEGS
VFLSLLPVPQQAQREEAGPTPSGLDSNCNLYSQEPSAPGLSALEVTDLVACIRSQDTLAM
GTNQKYYKLVTCDLSSQSPSPAWSSLTSCLEGPDRSSTILPPLDSEKEGPTKENMEASDH
QVATTSTAPRRKQHLQGTQSFSHMPCSLCSSQRSPHSNKCQETGAESTQPSVIQERDYND
VDATDMSVWCCDKELGRYSKLRRPTSLPIQPFVLLPAEKPQYQPQHLGGLLEQYLNQKSS
KPASSPNGLKSKEKRSECLSELQPSPVESLCPVFLEAASSSDTCSTCTPSPKCFSRRHMW
SPKSQRTSQEANLKLMAESQESSSLNSGTTNNQPNVVRIHTCQDLITLQPESKQVTSGSK
NTNEDPKKTAFHSKASHITPGKPDSNLRVSLSPPQTSQSQLMLQHHQPLIPAARLSSLST
FISSDLHSKQNHEPERLSLKPTKSQHSQSLILNSRPPAEFCLSPDTSYESMSISHLQRKG
LLRAVSRAVDLIMAHFGSSRDPEEKMRLGNSSYSPTIAGLVLEHLCPAIQNILEDGLRDH
KLDFIIGQRRNHSWSVVEISTRMGSSTKVLHTLVSKIKRCSELTSHCMRLRAFLMGLLNL
RALEFWLSHLQSQKDVVTAYYHTWGFLFTSLSRCRPLFQELLLLLQPLSVLPFDLNLLLE
PRLLSQRQLCSEERDALPPQPCSALLVTSWPKIQANRKSEYSKRNSQSHWREQEFLRSQS
SSCCKQDYGAMQNNRNLLLASLSNKPDFVQSVAKAVNVSLDHRSTLFQTNVDGRENEREV
EKESRGQNATASVQEDSPCQSGLRWAKLFGAAGVSSRAEKRSHPHTEAQKRRLPSQWLQL
DRTQIGLLAQSIRSIKLGPPQTGLGAEN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagcatccactctcccgggtcacaccttgctagcgtgccacttcccagtggtg
cagcttcccacctggcagcttccggtccaggccctgtgcagctccgccaagaggcccagc
cggctttgctcgtcgggtctgacccgggcggtgtccctcccagagcaggacacactcact
cgagaacactgctttacgggtggacggaggcccttttccagcagctacagcagtctccgt
gaggatcgggtggaggaagaggggaccagtgacagcagcggcaggtacgattccaactca
tcgccagaagaaacgggctccatcaacaaggaggaaagctgcggagctgcaaccacccag
cgctcacacaactcgttccttcccaacccagatctagatgaggacgaggaagacgaagac
agtgatggagacaatctccacagatatcgcgaggattcatctttcgtgttgcatggaaac
tccaactggtcgctgaacaacggtggtaatgatgcactgctccatgaagatctggacagt
gaatggattaatgaaggattaatgctgggaatgggaaggaaccaacactggctgtctaac
cagatggatttgctgcagtcaggatgccagggctttgctgtgaacagatctggcatcgct
cttctgacttgtttggagcaggactcagacagactgcaagagaacatttacagagagcac
aaatgttccccagagcagctgcccaacattcacacagaagatgtgagtgattcctcctgt
aacagctcagatggtgtgctggttaatttctgtaccatctacaacaaaagcaacaatcct
gccacacctcaggatctcagcagccctgctgttgacccctgtcactcatctgaggggtct
gtgttcctcagtctcctaccagttcctcaacaggcccagagagaagaagctgggccgaca
ccatccggcctagattcaaactgcaacctttactcccaggagccatcggctcctggtctt
tctgcgctggaggttacagatctggttgcctgcatacgaagtcaggacaccctggccatg
gggacaaaccagaagtactacaagctggtgacttgtgacctctcctcccagtcaccaagc
cctgcctggtccagtctcaccagctgtctcgaagggcctgacagaagcagcaccattctg
ccccctcttgactctgaaaaggaaggaccaaccaaggaaaacatggaggcaagcgaccac
caggttgccaccacctccactgccccccggaggaagcaacatttgcagggaacccagagc
ttctcccacatgccttgttcactgtgcagcagccagcgtagcccacatagtaataaatgc
caagaaacaggagctgaatccacccagccatctgtgattcaggagcgggattacaatgat
gtagatgccactgacatgagtgtttggtgctgcgacaaggaactgggacgctacagtaag
ctacgaaggccgacttctttgcccattcagccattcgttctgctccctgcagaaaagcca
cagtatcagcctcaacacctaggaggcctgcttgagcagtacctaaaccaaaagagcagc
aagcctgctagctccccgaacggactcaagtccaaggagaaaagaagcgagtgtttgtcc
gaactccagccatctccagtggagagcctctgcccagtattcttggaggctgcatccagc
tccgatacctgctccacctgcactccgagtccaaaatgtttcagccgcagacacatgtgg
agtccaaagtcccaaagaacatcacaagaggctaatctaaaattgatggccgagtctcag
gaaagctcaagcctaaactctggcacaacgaacaatcaacccaacgttgttaggattcac
acctgtcaggacctgatcaccctgcagccagagtcaaagcaagttacttctggatccaaa
aatactaacgaggatcccaaaaaaactgctttccattcaaaagcctcccacataacacct
ggaaaacctgactcgaaccttcgagtgtccttgtcgcctccccaaacctcacaatcacag
ctgatgctccagcatcatcaacccctcattcctgcagctcgcctctcctctttaagcact
ttcatctcctcagacctgcattccaagcaaaaccatgagcctgaaaggctcagcctaaag
ccaactaagagtcagcacagccagtcgctgatcctgaacagcaggccgcctgcagagttc
tgcctctcgccggatacatcatacgagtcaatgtctatcagtcatctgcagaggaaaggt
ttgctgagagctgtgagcagggcagtggatctgatcatggctcattttggaagtagcaga
gacccagaagaaaagatgcgtctgggtaacagctcttacagtcccaccatagctggcctc
gtcctagaacacttgtgtcctgcaattcagaacattttagaggatggactgagggaccac
aagctggatttcataattggtcagcgccgcaatcactcctggagtgtggtggagatctcc
acaagaatgggttcgtccaccaaggtcctccacaccctcgtttccaaaataaagcggtgc
tccgagctcaccagccactgtatgagactgagagccttcctcatgggccttctcaacttg
agagctttggaattctggcttagtcacctgcagagtcaaaaagatgtcgttacagcgtac
taccacacctgggggttcctgttcacgtcactgagtcgctgtcggcctctgttccaggag
ctgcttcttctccttcagccgctctcagtgctgccatttgacctaaatcttctcctggag
ccacgattgttaagtcaaagacaactgtgttcggaggagcgtgatgctctcccacctcag
ccgtgctctgccttgcttgtgaccagttggccaaagatacaagccaacagaaagtcagaa
tacagcaagcgaaacagtcaatcacactggagagagcaggagtttctacggtctcagagt
tcaagttgttgcaagcaggattatggggccatgcaaaacaacagaaatctgcttttggct
tctttgtcaaacaagccagattttgtgcaaagtgtagcaaaagctgtgaacgtcagccta
gatcatagaagtactttgtttcaaaccaatgtggatggtagggagaatgagagagaagtg
gaaaaagagagcagaggccaaaacgcaacagcttccgtccaggaagacagtccctgtcag
agcggcctgcggtgggccaagctgtttggagcagctggtgtttctagcagagctgagaaa
aggtcccaccctcacactgaagcacaaaaacgaaggctaccgtctcagtggctacagttg
gaccgaactcagattggacttttggctcaatccattagatccataaagctgggaccacct
cagactggcttgggtgctgaaaactaa
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