Xiphophorus couchianus (Monterrey platyfish): 114149751
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Entry
114149751 CDS
T05908
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114149751
04020 Calcium signaling pathway
114149751
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114149751
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114149751
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
114149751
NCBI-ProteinID:
XP_027881606
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All DBs
Position
8:6806914..6939642
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AA seq
2329 aa
AA seq
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MARFADDLPTRYGGSAGGGGRGAPGAGRGGARGGGGGGQRMYKQSMAQRARTMAIYNPNP
VKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPAGDK
TPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVG
SDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAIVMFAIIGVE
FYMGKFHQSCFKPGVPRAKRVVDWPCGSESPARTCPNGTVCQEYWTGPNFGITNFDNILF
AVLTVFQCITMEGWVDILYSTNDAVGNNWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKE
RERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKAPMDSAWYKRKQ
NLSVLKRGKIKKGKNDLIGAEEGDDPFADMSSVVPPGSPFGRASVKSGGKMDSSSYFRRK
EKRFRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTRALYTAELVFLGLFLT
EMTLKMYGLGVRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRLLRIFK
VTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFD
TFPAAILTVFQILTGEDWNAVMYHGIESQGGVERGMFSSIYFIVLTLFGNYTLLNVFLAI
AVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNQDALSR
RSSVTSIQSPSYTVYCSPTRHILKYSKEQQRSAKTMSVWEQRTNQLRKHNMKTSTEALFN
ELDPDELLAASSALHLHPDMKSHTDRPLVLEDKNGDQPRAGAPEEAAAPGVRDSFHSRRR
HHHRDRNGDGGDGQGVRRHSHHGRSREHNADAAQDRERLRPQTGSPEEERGHRHHRSRRT
PKEGNGRLTNGAQDDGKGRGDNGNGEKKLRSSRIQRDKQAETEDDSLAGSPLQLKRSSLT
PSEKQEDADNQKNSTRASQAALNSNAVHIPVTITAPPGETTIIPMNNIDCGNFQLNEEKK
DLEEEEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYFEMCILIVITMSSITLAAE
DPVEANADRNIALKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGA
LVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSL
KNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLEYDGEEVTAQPR
EWKKYEFHYDNVLWAFLTLFSVSTGEGWPLVLKHSVDATYEDQGPSPGFRMETSIFYVVY
FVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINARPLTRYMPENKQS
FQYKMWKFVVSSPFEYAIMTLIALNTVVLMMKFYKAPTVYESMLKYLNIIFTGLFTLECI
LKIIAFNPLNYLKEPWNVFDFVTVIGSITDILFTEINTNKMINLSFLRLFRAARLIKLLR
QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEETSINHHNNFQT
FFQALTLLFRSATGEAWHEIMLACLSNRPCDKLSGSSGKECGSDFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRICYRDMYKLLRLISP
PLGLGKKCPNRVAYKRLVRMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDA
DMKREIHRVWPNLQQKTVDLLVTPHKYNELTVGKVYAAHMIFDYYKQNRAKKLQQQNPSG
ISQSKLGALFRPVLPFTHLHEPAPPIKPALPPEPEPKTQAPPTFTSSTATNVDANMDAIL
NQRTSIKHSQSGDFSPVAARLKPHRRLQRGQSEDVHFCSRAQERQADPKPENMSDAEGRP
GLEGHARATSLPRLNAEYHRSHPRHAPGTHLAPIVDLSPIKRSASSLTPQQVGLREYDLE
RVDQSRFYAKPGPDPDPDRTHHHHHHHRCHRRRDKDKDRRQKSLDKTSSAPPSGTVGSFE
DPTADGLSRERARERDRSRPHERRHHSSAGEKQRYYSCERYGSREPGQARSAGPSRSTSP
GESQDSGLIKQQGSTVTKPPSGTSAQARGRRQLPQTPLTPRPAVAYKTPTSSAATPSAST
PGSRFVRGASEHDRLLAAHEEPKAPVGPDSNPSRQQLDSSLLEEGEDFQDAVSSHGGGHS
SRSATAPSTAAAQGRAAGVPNGYHFTLGSAPGSSRGAAGLREREEEDWC
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagacgatctacccacccgctatggagggagcgcgggcggcggaggg
agaggcgccccgggcgccgggagagggggcgcccggggcggcggtggcggcgggcagagg
atgtacaagcagtccatggcccagagagccagaaccatggccatttacaacccgaacccc
gtcaaacagaactgcctcacggtcaaccgctccctgttcatcttccgtgaggacaacctc
atcaggaagtacgcaaagcgaataacagagtggcctccgtttgaatacatgatcctggca
acgatcatcgccaactgcatcgtcttggcactggagcaacatctacctgctggcgacaag
actccgatgtcggaacgcctggacgacacggagccgtactttattggaatattctgtttc
gaggcggccattaagatcatcgccctgggcttcgcgtttcacaaaggctcgtacctccgc
aacggctggaatgtaatggacttcgtggtcgtcctcacagggatcctcgccaccgtcggt
tcagacttcgacctgcgaacgctccgcgccgtcagagtgctgaggcccctcaaactggtg
tccgggattcccagcctccaggttgtgctgaagtccatcatgaaggccatggttccgctg
ctgcagatcggcatgctgctgttcttcgccatcgtcatgttcgccatcatcggggtcgag
ttctacatgggcaagttccaccagtcctgcttcaagcctggagttcctagagctaagaga
gtggtggactggccgtgcgggtcggagtcgccggccagaacctgtcccaacggcaccgtg
tgccaggagtactggaccgggcccaacttcggcatcaccaacttcgacaacatcctgttc
gccgtgctgacagtgttccagtgcatcaccatggagggctgggtggacatcctgtacagc
actaatgatgcagtgggaaacaactggaactggctctacttcatccctctcatcattatt
ggctcctttttcatgctcaacttggtgcttggtgtcctgtcaggagaatttgccaaggag
agagaacgagtggagaagcgtcaggagttcctgaagcttcggcgacagcagcagatcgag
cgggagctcaccggctacctggagtggatctgcaaggcggaggaggtgttgcttgaagaa
gaagatgagattgcagaggagaaggccccgatggacagcgcctggtacaagaggaaacaa
aacctttcagttctgaagcgagggaaaatcaagaagggtaaaaacgatctgattggtgca
gaggagggcgacgatccctttgctgacatgtcctctgttgttccccccggctccccgttc
ggtcgggccagtgtaaaaagcggcgggaagatggacagctcatcttacttccggcgcaaa
gagaaacgcttccggttcttcatccggcggatggtgaaagctcagagtttctactggatc
gttctgtgcctggtgggcctcaacacgctgtgcgtggccatcgtccactacgaccagccg
gactggctgaccagagcgctctacacagcagagctggtgtttctgggtttgttcctgacg
gagatgaccttgaagatgtacggcctcggagtgagaaattacttccactcgtccttcaac
tgctttgattttggggtgatcgtgggaagtatttttgaggtcatctgggacatgataaaa
ccaggagcatcgtttgggatcagcgtgctgagggccctgagactcctccggattttcaaa
gtcaccaaatactggaactcgttgaggaatctcgtcgtttcccttctcaactccatgaag
tccatcatcagcctgctcttcctcctcttcctcttcattgtggtcttcgctttgctcggc
atgcagctcttcggtggacagtttaactttgaagatgagacaccaacaacaaactttgat
accttcccagcagccatcctcactgtgttccagatcctgaccggcgaggactggaacgcc
gtcatgtaccatggcatcgagtctcagggcggcgttgagcgtgggatgttctcctccatc
tacttcatcgtcctcacgctctttggaaactacactttgctaaacgtcttcttggccatc
gctgttgataacctcgccaacgcccaagagctgacaaaggatgaagaggagcaggaggaa
gcagccaataagaagctcgctctgcagaaagctctggaagtaaaagaagtcagcccgatg
tcagccgccaacatttccatcgctgcttttgtaaagcaaaatcaagatgcactctctcgc
aggtcgtccgtcaccagcattcagtcaccgagttatacagtctactgctcccccactcga
catatcttgaaatacagcaaggagcagcagcgttctgcaaagaccatgtcggtgtgggag
cagcggaccaaccagctgaggaagcacaacatgaagacgagcaccgaggcgctgttcaac
gaactggacccggacgagctcctcgccgcctccagcgccctccacctgcaccccgacatg
aagtcgcacaccgatcggccgctcgtcctggaggacaagaacggcgaccagccccgagcc
ggcgcaccggaggaggcggcggcgcccggcgtcagggacagcttccactccaggaggcgc
caccaccaccgcgaccggaacggggacggaggcgacggccagggggtccggcgccacagc
caccacggccgcagcagggagcacaacgccgacgctgcccaggacagagagaggctccgc
ccccaaaccgggtcaccggaggaggagagaggccatcgtcatcaccgctcccgccgcacg
ccgaaggaaggaaacgggcgactgacgaacggagcgcaagacgacgggaaagggagagga
gacaacggcaacggggagaagaagctgcgctcctcacgcatccagagggacaaacaggca
gaaacggaggacgacagccttgctgggagtccgttgcagctgaagcgaagcagcttgacg
ccgagtgaaaaacaggaagatgccgacaaccagaagaactcgaccagagccagccaggcc
gccctgaacagcaacgccgtccacatccccgtcaccatcaccgcgccgcctggagaaacc
accatcattcccatgaacaacatcgattgtggcaacttccagctcaatgaggagaagaaa
gatctggaagaggaggaggccgctaacgggccgcggcagattcttccctacagctccatg
ttcgtcttcggacaaacaaacccggtgcggcgcctgtgtcactacgtggtcaacctgcgc
tactttgagatgtgcatcctgattgtcatcaccatgagcagcatcacgctggccgccgag
gacccggtggaggccaacgctgaccgcaacatcgctctgaaatacctggactatgtcttt
actggagtcttcacgtttgagatggtgataaagatgatcgacctgggcctgctcctccac
cccggctcgtatttccgtgacctttggaacatcctggacttcatcgtggtcagcggcgct
ctggtggccttcgcctgctcgagcctcatgggatcacaacaaagtgtggccagaggaacg
aagggaaaagacatcaacaccatcaaatccctgcgagtgctgcgagttctgcgacctctg
aagaccatcaagcggctgccgaagctgaaggctgtgttcgactgcgttgtgaactctctg
aagaacgtcctgaacatcctcatcgtctacatcctctttatgttcatctttgccgttatc
gccgttcagctcttcaaaggcaaattcttctactgcaccgacgagtccaaaggtctggag
aaagactgcagaggtcagtttctggagtacgatggtgaggaagtgacggctcagcccaga
gagtggaagaagtatgagtttcactatgataatgttctctgggctttcctgacgctgttc
agtgtctccactggagagggctggccactggtcctgaagcattctgtggacgccacgtac
gaagaccagggccccagcccgggtttccgcatggagacgtctatcttctatgtggtctac
tttgtggtgtttccgttcttcttcgtcaacatttttgtagctttgatcatcatcaccttc
caggagcagggagataaggcgatgtcggagtgcagcttggagaagaacgagagggcctgt
atcgacttcgccatcaacgccaggccgcttacacgatacatgccagagaacaagcagtcc
ttccaatacaagatgtggaagtttgtggtgtcgtcacctttcgagtacgccattatgact
ttaatcgccctcaacaccgtcgtcctgatgatgaagttctacaaagctccaacggtgtac
gagtctatgctgaaatacctcaacatcatcttcactggcctcttcacactagagtgcatc
ctcaagattattgctttcaatccactgaactacctgaaggaaccctggaatgtgtttgac
tttgtgacggtgattgggagcatcacagacattttgttcacagagataaatacgaacaag
atgataaacctgagtttcctgaggctgttcagagctgctcgcctcatcaagctgctgcgc
cagggctacaccatccgcatcctgctttggaccttcgttcagtccttcaaggctctgccg
tatgtctgcctgctgatcgccatgttgttcttcatctacgccatcattgggatgcaggtg
tttgggaacatcgagttgaacgaagagacttccataaatcaccataacaacttccagacc
ttcttccaggccctgaccctcctgttcaggagtgcaacaggagaggcgtggcatgagatc
atgctggcctgcctcagtaaccggccgtgtgataaactctcgggaagttcagggaaggag
tgcggcagcgatttcgcctacttctacttcgtgtccttcatcttcctctgctccttcctg
atgttgaatctgttcgttgccgtcatcatggacaactttgagtatctaactcgggacgcc
tccatcctcgggccgcaccacctggacgagttcatccgcgtgtgggcagagtacgacccc
gccgcctgtgggaggatttgctatcgggacatgtacaaattattgcgtttaatctcgcct
cccctgggcctggggaagaagtgccccaacagggtggcttacaagcgcctggtgaggatg
aacatgccgatcgccgacgacaacacggtccatttcacctccacgctgatggctctgatc
cgcaccgcgctggagattaagctggcgtccggtgtgctggcgcagcgtctgtgcgacgcc
gacatgaagcgggagatccaccgcgtttggcccaacctgcagcagaagaccgtggacctg
ctggtcacgcctcataagtacaatgagctgactgtggggaaagtttatgctgcccacatg
atctttgactactacaaacagaaccgagccaagaagctccagcagcagaacccgtctggg
atctctcagagtaagctgggcgctctgttccgcccagttctgcccttcactcatctacat
gagccggcgccgccaatcaaaccggctctgccaccagaaccggaacccaaaacacaagcc
ccgcccactttcaccagcagcaccgccaccaatgtggacgccaacatggacgccattctg
aaccagaggacttccattaaacattcccagtctggagatttctccccggtggctgcgagg
ctgaagccgcaccggcggctgcagagaggccagtcagaggacgtccacttctgcagcaga
gctcaggagcggcaggccgacccgaagccggagaacatgtctgacgcagagggccggccc
ggcctggagggccacgccagagccacatcgctgccacgcctaaacgcagaataccaccgg
agccaccctcgccacgcccccgggacccacctggcaccgatcgttgacctcagcccaata
aaacgctcggcgtcgtcgctgacgccccagcaggtcgggttgagggagtatgacctggag
cgggtcgaccagagccggttctatgccaaaccgggaccggacccggacccggaccggacc
caccaccatcaccaccatcaccgttgccaccggcgcagagacaaggacaaagacaggagg
cagaagtctctggataaaacatcctcagcgccgccgtccggcacagtcggttcgtttgaa
gacccgacagccgacggtttgtccagagagcgagcgagggagcgggaccgcagccgcccc
catgagaggaggcaccactcctccgccggggagaagcagcgctactactcctgcgagcgc
tacggcagcagggagccgggtcaggcccggtcggccggtccgagccggtccacgtctccg
ggagagagccaggactctggcctcatcaaacagcagggaagcactgtgacgaagccacca
tctggtaccagcgctcaggcccgtgggcgccgccagctcccccagacgccgcttacgcct
cggcccgccgtggcctacaagacccccacctcctcagctgctacgcccagcgcctccacg
cccgggtctcgcttcgtccgcggagcatcggagcacgaccgcctgctagcggctcacgag
gagcccaaagccccggttggtccggactctaacccgagccggcagcagctggactcgtcc
ctgctggaggagggcgaggacttccaggacgctgtgagcagccatggggggggacactcc
tccagaagcgccactgcgccatccaccgccgccgcgcaggggcgggcagcgggagtaccg
aacggctaccacttcaccctggggtctgcgccgggcagcagcaggggagcggcgggtctc
agggagcgggaagaggaggactggtgctag
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integrated database retrieval system
