Xiphophorus couchianus (Monterrey platyfish): 114149757
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Entry
114149757 CDS
T05908
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114149757
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114149757
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
114149757
NCBI-ProteinID:
XP_027881628
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Position
8:complement(6446413..6492549)
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AA seq
1251 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDEPQSKGQRIHQRLKPEPEPEPSCVSFKSNMSKYVITHF
KSPGSPPSERMDQQSSEVASGPSAQQHQTHLDSIFMLLEDNIVTFVKNELKKIQKVLSPD
DPECSENQREDDDVLEGEDEEQRRSNTEAMMKITLNILRRMKQEELADRLQSKQFAAVCR
HYHKSGLKNKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKP
HRPETTIRQEDIFKVPLGRDQPVRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIF
PFTFRELNVLKEKKFSLVELVHYFFTETKEICSFEHFQVLFIFDGLDESRLSLDFHNKEI
LTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKE
EYFRKRFRDKDQANRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPSTLT
EMYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLT
ECGIDIRAASMYSGVFTQIFKEERGLYQEKVFCFVHLSVQEFLAALHVHLTFINSGSDVM
KETQRSKKSSLLNKSHLKSLHQRTVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLT
KTGSSSQTNQKTVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIHQFLSSGSLSTD
ELSPAQWSALVFILVSSGKDLDVFDLKKYSPSEEVLLKLLPVVKASNKALLSVCNLSKRS
CEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSDCNLSERSCE
ALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASL
ASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRLSGCNLSERSCEALSS
VLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLASAL
TSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVQFLTPGLRKYSCQL
TIDTNTVNRELKLSEDNRKVTCVKELQSYPDHPDRFDYWPQLLCRTGLTGRCYWEVEWRG
RVNISVSYRRIRRKGSSDDCLFERNDHSWSLRYSDYDGYSVWHNKIKTRLSSSSDSNRVA
VYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFWPSYGSSVFLC
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagccccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagcaacatgtcaaagtatgtgatcactcacttt
aaatctcctggatctccaccatcagagagaatggaccagcagagctcagaggttgccagt
ggtccgtctgcccagcagcatcaaacacatctggactccatatttatgctgctggaggac
aatattgtcacttttgtgaaaaatgagctgaaaaagattcagaaggttctgagtcctgat
gacccagaatgttcagagaatcagagagaggatgatgatgtgttggaaggtgaggatgaa
gagcagagaaggagcaacacagaggcaatgatgaagatcacactgaacatactgaggagg
atgaagcaggaggagctggctgaccgtctgcagagcaaacaatttgctgcagtttgtcga
cattatcataaatctggtttgaagaacaagttccagtctgtgtttgaggggattgctaaa
gcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
acgggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccagaaaacca
cacagaccagaaacaacaatcagacaagaagacatctttaaagtcccacttggaagagat
caaccagtcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaaca
cagaagttcacactggactgggctgaagacaaagcccaccagaacatccagttcatattt
ccattcaccttcagagagctgaatgtgctgaaagagaaaaagttcagcttggtggaactt
gttcattatttctttactgaaaccaaagaaatctgcagctttgaacacttccaggttctg
ttcatctttgatggtctggatgagagtcgactttcgctggacttccacaacaaggagatc
ctgactgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcaggggg
aaactgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatc
cctcctcagtgtgttggcatggtgacagaggtcagagggttcaatgacccacaaaaggag
gagtatttcaggaagagattcagagataaggatcaggccaacaggatcatctcccacata
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttggagaccagagagggaggagagctgcccagcaccctgacc
gagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatgga
ggagctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctggga
aaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcaatgtactcaggagtgttcacacagatcttt
aaagaggagagaggtctgtaccaggaaaaggtgttctgcttcgtccatctgagtgttcag
gagtttttggctgctcttcatgttcatctgaccttcatcaactctggttctgacgtgatg
aaagaaacacaaagatctaagaaatcttcattacttaataaatctcacctaaaatctctc
catcagagaactgttgaccaggccttacagagtccaaatggacacctagacttgttcctc
cgcttcctcctgggactttcactgcagactaatcagagactcctacaaggtctgctgaca
aagacaggaagtagctcacagaccaatcagaaaacagttcagtacatcaaggagaagatc
aatgagaatgtgtctgcggagaaaagcatcaatctgttccactgtctgaatgaactgaat
gatcgttctctagtggaggagatccaccagtttctgagttcaggaagtctctccacagat
gaactgtctcctgctcagtggtcagctctggttttcatcttagtgtcatcaggaaaagat
ctggatgtgtttgacctgaagaaatactctccttcagaggaggttcttctgaagctgctg
ccagtggttaaagcctccaacaaagctctactgagtgtctgtaacctctcaaagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtcca
aactgcaacctggaaactctcagactgagtgactgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactg
gaagctctcagactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaacctgcag
gattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctggaaact
ctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcctcagctctg
acctccaacccctcccatctgaaagagttggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtcggctggactgaaggatccacactggagactggaagctctcagg
gtggagcctgctggagtccaattcttgacaccaggtctgaggaagtattcctgtcaactc
accatcgacacaaacacagtgaacagagaactcaaactgtctgaagacaacaggaaggtg
acatgtgtgaaggagcttcagtcatatcctgatcatccagacagatttgattactggcct
cagctgctgtgtagaactggtctgactggtcgctgttactgggaggttgagtggagagga
agagttaatatatcagtgagttacagaagaatcaggaggaaaggaagcagtgatgactgt
ttgtttgaaaggaatgatcattcctggagtctgagatactctgattatgatggttactct
gtctggcacaataagataaaaactcgtctctcctcctcctctgactctaacagagtagca
gtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctctgactcactg
atcctcctccacaccttcaacaccacattcactgaacctctgattcctggatttgggttc
tggcccagttatggttcctcagtgtttctgtgctga
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