Xiphophorus couchianus (Monterrey platyfish): 114149758
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Entry
114149758 CDS
T05908
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114149758
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114149758
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_1
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
114149758
NCBI-ProteinID:
XP_027881629
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Position
8:6686926..6726152
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AA seq
1214 aa
AA seq
DB search
MDQCENREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSDRSKDEIIHF
KSPGSPPSERVDEQSSEVPSGPSAQQQQTQLDSIFMLLEDNIVTFVKKELKKIQKVLSPN
DPEHSESQRDDDDVLEGDDEKQRRSNREAVMKITLNFLRRMKQEELADRLESRYFAPVCQ
RQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKP
HRPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVFTQKFTLDWAEDKAHQNIQFIF
PFTFRELNVLKEKKFSLVKLVHYFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEI
LTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAASQIPPQCVGMVTEVRGFNDPQKE
EYFRKRFRDKDQANRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPSTLT
EMYIHFLMVQTKVKNLKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLT
ECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGSDVM
NETQRSKKSSLFNKSKLKSLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLT
KTGSSSQTNQKTVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTD
ELSPAQWSALGFILVSSGKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERS
CEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLTGCLVSEEGCA
SLASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRLSGCNLSERSCEAL
SSVLSSQPSSLRKLDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLAS
ALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVQFLTPGLRKYSC
QLTIDTNTVNREIQLSEDNRKVTHVEELQSYPDHPDRFDYWNQLLYRTGLTGRCYWEVEW
SGKVYISVSYRRIRRKGKSVDCWFGGNDHSWSLSCSDVGYSVWHNDIETRLSSSSVSNRV
AVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFRFWSSSGSSVFLCSVESKESK
DFPPVRETLSLLNR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgagaacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagtgacaggtcaaaggatgagatcattcacttt
aaatctcctggatctccaccatcagagagagtggacgagcagagctcagaggttcccagt
ggtccgtctgcccagcagcaacaaacacagctggactccatatttatgctgttggaggac
aatattgtcacttttgtgaagaaagaactgaaaaagatccagaaagttctgagtccaaat
gacccagaacattcagagagtcagagagatgatgatgatgtgttggaaggtgatgatgaa
aagcagaggaggagcaacagagaggcagtgatgaagatcacactgaacttcctgaggagg
atgaagcaggaggagctggctgaccgtctggagagcagatattttgctccagtttgtcaa
cgtcaacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaa
gcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
actggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaacca
cacagaccagaaacaacaatcagacaagaagacatctttaaagtcccacctggaagagat
caaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttcaca
caaaagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatattt
ccattcacgttcagagagctgaatgtgctgaaagagaaaaagttcagcttggtgaaactt
gttcattatttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctg
ttcatctttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatc
ctgactgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcaggggg
aaactgcttccctctgctctcctctggataaccacacgacctgcagcagccagtcagatc
cctcctcagtgtgttggcatggtaacagaggtcagagggttcaatgacccacagaaggag
gagtacttcaggaagagattcagagataaggatcaggccaacaggatcatctcccacata
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttggagaccagagagggaggagagctgcccagcaccctgact
gagatgtacatccacttcctcatggttcagaccaaagtgaagaatctcaagtatgatgga
ggagctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctggga
aaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatcttt
aaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcag
gagtttctggctgctcttcatgttcatctgaccttcatcaactctggttctgacgtgatg
aatgaaacacaaagatctaagaaatcttcattatttaataaatctaaactaaaatctctc
catcagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctgaca
aagacaggaagtagctcacagaccaatcaaaaaacagttcagtacatcaaggagaagatc
aatgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaat
gatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagat
gaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagat
ctggatgtgtttgacttgaagaaatactctgcttcagaggaggctcttctgaggctgctg
ccagtggttaaagcctccaacaaagctttactgagtggctgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtcca
aactgcaacctggaaactctcagcttaacaggctgtttggtctcagaggaaggctgtgct
tctctggcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctac
aatcatccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactgg
agactggaagctctcagactgagtggctgtaacctctcagagagaagctgtgaagctctg
tcctcagttctcagctcccagccctccagtctcagaaaactggacctgagtaacaacaac
ctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctg
gaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcctca
gctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcatccagga
gactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactggaagct
ctcagggtggagcctgctggagtccaattcttgacaccaggtctgaggaagtattcctgt
caactcaccatcgacacaaacacagtgaacagagagatccaactgtctgaagacaacagg
aaggtgacacatgtggaggagcttcagtcatatcctgatcatccagacagatttgattac
tggaatcagctgctgtatagaactggtctgactggtcgctgttactgggaggtcgagtgg
agtggaaaagtttatatatcagtgagttacagaagaatcaggaggaaaggaaaaagtgta
gactgttggtttggagggaatgatcattcctggagtctgagctgctctgatgttggttac
tctgtctggcacaatgacatagaaactcgtctctcttcctcctctgtttctaacagagta
gcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctctgactca
ctgatcctcctccacaccttcaacaccacattcactgaacctctgattcctggatttagg
ttctggtccagttctggttcctcagtgtttctgtgctcagttgagtctaaagagtctaaa
gattttcctcctgtcagagaaactctctcactgttgaacagatag
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integrated database retrieval system
