Xiphophorus couchianus (Monterrey platyfish): 114149760
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Entry
114149760 CDS
T05908
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114149760
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114149760
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
114149760
NCBI-ProteinID:
XP_027881639
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Position
8:complement(7019920..7052005)
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AA seq
1136 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRINQRLKPEPEPEPSCVSFKSDRSKDQDIYF
KSPGSPPSERVDQQSSEVPSCPSAQQHQTQLDSIFMTLEDNIVTFLKNELKKIHKILSPN
DPECSESQRDDDDVLEGEDEEQRRSSREAVMKITLNFLRRMKQEEMADRLESKRLAAVCE
HQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETAFRKP
HRAETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIF
PFTFRELNVLKDKKFSLVELVHHFFRETKKICSFKHFQVLFIFDGLDESRLPLDFHNKEI
LTDATESTSVDVLLTNLIRGKLLPSALLWITARPAAANQIPLQCVGMVTEVRGFNDPQKE
EYFRKRFRDEEQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTLT
EMYIHFLVVQTKVKKVKYEGGAETDPHWSPESRKMIKSLGKLAFDQLQKGNLIFYESDLT
ECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLM
EESFTLQTASLFNKPELKSLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLT
ETGSSSQTNQKTVQYIKEKISENVSAEKSINLFHCLNELNDHSLVEEIQQSLSSGSLSTD
KLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSGCNLSERS
CEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSDCNLSERSCE
ALSSVLSSQPSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCAFL
ASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHFRLEALRVEPAGVPFLTPGLRKY
SCQLTIDTNTVNRELKLSEDNRKLTCEELQSYPDHPDRFDYWDQLLCRTGLTGRCYWEVE
WRGTVDISVSYRRIRRKGDSRDCLFGYNDHSWRLSCSDADGYSVWHNKIKTRLSSSSDSN
RVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFWFWSRSGSSVFLC
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatcaatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagcgacaggtcaaaggatcaagatatttacttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcctagt
tgtccgtctgcccagcagcatcaaacacagctggactccatatttatgacgctggaggac
aacattgtcacttttctgaagaacgagctgaagaagatccataagattctgagtccaaat
gacccagaatgctcagagagtcagagagatgatgatgatgtgttggaaggtgaggatgaa
gagcagaggaggagcagcagagaagcagtgatgaagatcacactgaacttcctgaggagg
atgaagcaggaggagatggctgaccgtctggagagcaaacgtcttgctgcagtttgtgaa
catcaacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaa
gcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
actggagaggtcaatgatgaacatgaggtcagacagattgaaacagcattcaggaaacca
cacagagcagaaacaacaatcagacaagaagacatctttaaagtcccacctggaagagat
caaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcctaaca
cagaagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatattt
ccattcactttcagagagctgaatgtgctgaaagataaaaagttcagcttggtggaactt
gttcatcatttctttagagaaaccaaaaaaatctgcagctttaaacacttccaggttctg
ttcatctttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatc
ctgactgatgctacagagtccacctcagtggatgttctgctgacaaaccttatcaggggg
aaactgcttccctctgctctcctctggataaccgcacgacctgcagcagccaatcagatc
cctcttcagtgtgttggcatggtaacagaggtcagggggttcaatgacccacagaaggag
gagtacttcaggaagagattcagagatgaggagcaggccagcaggatcatctcccacatg
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttggagaccagagagggaggagagctgcccagaaccctgact
gagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgaagga
ggagctgaaacagatccacactggagtccagagagcaggaagatgatcaagtctctggga
aaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatcttt
aaagaggagagaggtctgtaccaggacaaggtgttctgtttcgtccatctgagtgttcag
gagtttctggctgctcttcatgttcatctgacctttatcaactctggtgtcaacctgatg
gaagaatcatttacacttcagacagcctcgctatttaataaacctgaactaaaatctctc
catcagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctgaca
gagacaggaagtagctcacagaccaatcagaaaacagttcagtacatcaaggagaagatc
agtgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaat
gatcattctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagat
aaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagat
ctggatgtgtttgacctgaagaaatattctgcttcagaggaggttcttctgaggctgctg
ccagtggttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtcca
aactgcaacctggaaactctcagactgagtgactgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagccctccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttttctg
gcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactttagactg
gaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacagtgaacagagaactcaaactgtctgaagac
aacaggaagctgacatgtgaggagcttcagtcatatcctgatcatccagacagatttgat
tactgggatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgag
tggagaggaacagttgatatatcagtgagttacagaagaatcaggaggaaaggagacagt
agagactgtttgtttggatataatgatcattcctggaggctgagctgctctgatgctgat
ggttactctgtctggcacaataagataaaaactcgtctctcctcctcctctgactctaac
agagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctct
gactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcctgga
tttgggttctggttctggtccaggtctggttcctcagtgtttctgtgctga
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integrated database retrieval system
