Xiphophorus couchianus (Monterrey platyfish): 114149763
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Entry
114149763 CDS
T05908
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114149763
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114149763
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
114149763
NCBI-ProteinID:
XP_027881646
LinkDB
All DBs
Position
8:5295725..5405372
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AA seq
1115 aa
AA seq
DB search
MSKDDFIDFKSSGSPPSERIHQRLKPEPEPSCVSFKSDRSKEDFIDFKSPGSPPSERVDQ
QSSEFASGPSAQQHQTKLDSIFMLLENNIVTFVKNELKKIQKVLNPDYPECSESQREDDE
VLEGDDEEQTRISREAVMKITLNFLRRMKKEELADCLQIKHLAAVCHHQLKSALKKKFQS
VFEGIAKAGSPTLLNQIYTELYITEGGTGGVNDEHEFRQIETASRKTHRPETTIRQEDIF
KVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEGKAHQNIQFIFPFTFRELNVLKEK
KFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVL
LTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDEEQA
SRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPSTLTEMYIFFLVVQTKV
MKVKYDEGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYS
GVFTEIFKEERGLYQDKVFCFIHLSVQEFLAALHVHLTFINSGVNLMEENTPSYFSTFNR
SNINYLHQRAVNQALQSPNGHLDLFLRFLLGVSLQSNQRLLKGLLTQTGNRSQTNQETVQ
YIKEKIRENGFAEKSINLFHCLNELNDRSLVESLSSGSLSTDKLSPAQWSALGFILLSSG
KDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSDCNLSERSCEALSSVLSSQSSSLREL
DLSNNNLQDSGVKLLSAGLKSRNCNLETLRLSDCNLSERSCEALSSVLSSQSSSLRELDL
SNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEKGCASLASALTSNPSHLKELDLSY
NHPGDSGVKLLWAGLKDPHWRLEALRVEPAGVPFLTPGLRKYSCQLTIDTNTVSREIKLS
EDNRKVTHLEELQSYPDHPDRFDVWPQLLCRTGLTGRCYWEVEWRGRVDISVSYRRIRRK
GDCRDCVFGWNDHSWSLICCDVDGYSVRHNERVTRLSSSSVSNRVAVYVDCPAGILSFYR
VSSDSLILLHTFDTTFTEPLIPGFWFSSVSSVFLC
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggatgatttcattgactttaaatcttctggatctccaccatcagagaggatc
catcagagactcaaaccagaaccagaacccagctgtgtgtcctttaagagcgacaggtca
aaggaagatttcattgactttaaatctcctggatctccaccatcagagagagtggaccag
cagagctcagagtttgccagtggtccgtctgcccagcaacatcaaacaaagctggattcc
atatttatgctactggagaacaacattgtcacttttgtgaagaacgagctgaagaaaatc
cagaaggttctgaatccagattacccagaatgctcagagagtcagagagaagatgatgag
gtgttggaaggtgatgatgaagaacagacaaggatcagcagagaggcagtgatgaagatc
acactgaacttcctgaggaggatgaagaaggaggagctggctgactgtctgcagatcaaa
catcttgctgcagtttgtcaccatcaacttaaatctgctctgaagaagaaattccagtct
gtgtttgaggggattgctaaagcaggaagtccaacccttctgaaccagatctacacagaa
ctctacatcacagagggagggactggaggggtcaatgatgaacatgaattcagacagatt
gaaacagcatccaggaaaacacacagaccagaaacaacaatcagacaagaagacatcttt
aaagtcccacctggaagagatcaaccaatcagaacagtgatgacaaagggagtggctggc
attgggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaaagcccac
cagaacatccagttcatatttccattcactttcagagagctgaatgtgctgaaagagaaa
aagttcagtttggtggaacttgttcatcatttctttagtgaaaccaaagaaatctgcagt
tttgaacacttccaagttcttttcatctttgatggcctggatgagagtcgacttcctctg
gacttccacaacaaggagatcctgactgatgctacagagtccacctcagtggatgttctg
ctgacaaacctcatcagggggaaactgcttccctcagctctcctctggataaccacacga
cctgcagcagccaatcaaatccctcctcagtgtgttggcatggtgacagaggtcagaggg
ttcaatgacccacagaaggaggagtacttcaggaagagattcagggatgaggagcaggcc
agcaggatcatctcccacatgaagacatcacgaagcctccacatcatgtgccacatccca
gttttctgctggatcactgctacagttctggaggatgtgttggagaccagagagggagga
gagctgcccagcaccttgactgagatgtacatcttcttcctggtggttcagaccaaagtg
atgaaggtcaagtatgatgaaggagctgaaacagatccacactggagcccagagagcagg
aagatgattgagtctctgggaaaactggcttttgatcaactgcagaaaggaaacctgatc
ttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactca
ggagtgttcacagagatctttaaagaggagagagggctgtaccaggacaaggtgttctgc
ttcatccatctgagtgttcaggagtttctggctgctcttcatgttcatctgactttcatc
aactctggtgtcaacctgatggaagaaaatacaccatcatatttctctacatttaacaga
tcaaatataaattatctccatcagagagcagttaaccaggccttacagagtccaaatgga
cacctggacttgttcctccggttcctcctgggagtttcattgcagtccaatcagagactc
ctaaaaggtctgctgacacagacaggaaatcgttcacagaccaatcaggaaacagttcaa
tatatcaaggagaagataagagagaatggatttgcagagaaaagcatcaatctgttccac
tgtctgaatgaactgaatgatcgttctctagttgagtctctgagttcaggaagtctctcc
acagataaactgtctcctgctcagtggtcagctctgggtttcatcttattgtcatcagga
aaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgagg
ctgctgccagtggttaaagcctccaacaaagctctactgagtgactgtaacctctcagag
agaagctgtgaagctctgtcctcagttctcagctcccagtcctcaagtctcagagaactg
gacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaaa
agtagaaactgcaacctggaaactctcagactgagtgactgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtcca
aactgcaacctggaaactctcagcttatcaggctgtttggtctcagagaaaggctgtgct
tctctggcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctac
aatcatccaggagactcaggagtgaagctgctgtgggctggactgaaggatccacactgg
agactggaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgagg
aagtattcctgtcaactcaccatcgacacaaacacagtgagcagagagatcaaactgtct
gaagacaacaggaaggtgacacatttggaggagcttcagtcatatcctgatcatccagac
agatttgatgtttggcctcagctgctgtgtagaactggtctgactggtcgctgttactgg
gaggttgagtggagaggaagagttgatatatcagtgagttacagaagaatcaggaggaaa
ggagactgtagagattgtgtgtttggatggaatgatcattcctggagtctgatctgctgt
gatgttgacggttactctgtcaggcacaatgaaagagtaactcgtctctcctcctcctct
gtctctaacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctacaga
gtttcctctgactcactgatcctcctccacaccttcgacaccacattcactgaacctctg
attcctggattctggttcagctctgtttcttcagtgtttctgtgctga
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