Xiphophorus couchianus (Monterrey platyfish): 114149765
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Entry
114149765 CDS
T05908
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 4E-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114149765
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114149765
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
114149765
NCBI-ProteinID:
XP_027881649
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Position
8:5637458..5647491
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AA seq
1076 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPXPEPEPSCVSLKSDMSKDAGIVF
KSPGSPPSERVDQQSSEVPGGPSAQQHQTQLDSILMLLEDNIVTFVKKELKKIKKVLSPN
YPECSESQKEDEVLEGEEEEQRRSSREALMKITLNFLRRLKKEELADCLQSKHLAAVCQH
QLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPH
RPETTIRQEDIFKVAPRRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFP
FTFRELNVLKEKKFRLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEIL
TDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKEE
YFRKRFRDEEQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPSTLTE
MYIHFLVVQTKVKKVKYEGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDVTE
CGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLSFINSGVNLMK
ETQTSKKFLLFNEPKIISVHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTQ
TGSRSQTNQETVQYIKKMISENVSAEKSINLFHCLNELNDHSLVEEIQLSLSSGSLSTDK
LSPAQWSALGFILVSQGKDLDVFDLKKYSASEEVLLRLLPVVKVSNKALLSVCNLSERSC
EALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSGCLVSEEGCAS
LTSALTSNPSHLKELDLSYNHPGDSGVKLLWAGLKDPHWRLEALRVEPAGVPFLTPGLRK
YSCQLTIDTNTVNKKLKASEDNRKVTYVKELQSYPDHPDRFDNWDQLLCRTGLTGRCYWE
VEWSGYVNISVSYRRIRRKGDSRDCLFGYNDHSWSLSCSDSYGYSVRHNNRETHLSSSVS
NRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFWRTSSGSSVFLC
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccataaccagaa
ccagaacccagctgtgtgtccttgaagagtgacatgtcaaaggatgcaggcattgtcttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcccggt
ggtccgtctgcccagcagcatcaaacacagctggactccatattgatgctgctggaggac
aacattgtgacttttgtgaagaaagaactgaagaagataaagaaggttctgagtccaaat
tacccagaatgctcagagagtcagaaagaggacgaggtgttggaaggtgaggaagaagaa
cagaggaggagcagcagagaggcactaatgaagatcacgctgaacttcctgaggaggttg
aagaaggaggagctggctgactgtcttcagagcaaacatcttgctgcagtttgtcaacat
caacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagca
ggaagtccaacccttctgaaccagatttacacagagctctacatcacagagggagggact
ggagaggtcaatgatgaacatgaggtcagacagattgaaacagcttccaggaaaccacac
agaccagaaacaacaatcagacaagaagacatctttaaagtcgcacccagaagagatcaa
ccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttcca
ttcacgttcagagagctgaatgtgctgaaggagaaaaagttcagattggtggaacttgtt
catcatttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttc
atctttgatggtctggatgagagtcgacttccactggacttccacaacaaggagatcctg
actgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcagagggaaa
ctgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccct
cctcagtgtgttggcatggtgacagaggtcagagggttcaatgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcaggatcatctcccacatgaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgttggagaccagagagggaggagagctgcccagcaccctgactgag
atgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgaaggagga
gctgaaacagatccacactggagtccagagagcaggaagatgatcgagtctctgggaaaa
ctggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacgtgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggag
tttctggctgctcttcatgttcatctgagcttcatcaactctggagtcaacctgatgaaa
gaaacacaaacatctaagaagtttttattatttaatgaacctaaaataatttctgtccat
cagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctccgc
ttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgttgacacag
acaggaagtagatcacagaccaatcaggaaacagttcagtacatcaagaagatgatcagt
gaaaatgtgtctgcagagaaaagcatcaatctattccactgtctgaatgaactgaatgat
cattctctagtggaggagatccaactgtctctgagttcaggaagtctctccacagataaa
ttgtctcctgctcagtggtcagctctgggtttcatcttagtgtcacaaggaaaagatctg
gatgtgtttgatctgaagaaatactctgcttcagaggaggttcttctgaggctgctgcca
gtggttaaagtctccaacaaagctctactgagtgtctgtaacctctcagagagaagctgt
gaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagt
aacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaac
tgcaacctggaaactctcagattatcaggctgtttggtctcagaggaaggctgtgcttct
ctgacctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaat
catccaggagactcaggagtgaagctgctgtgggctggactgaaggatccacactggaga
ctggaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaag
tattcctgtcaactcaccatcgacacaaacacagtgaacaaaaaactcaaagcgtctgaa
gacaacaggaaggtgacatatgtgaaggagcttcagtcatatcctgatcatccagacaga
tttgataactgggatcagctgctgtgtagaactggtctgactggtcgctgttactgggag
gtcgagtggagtggatatgttaatatatcagtgagttacagaagaatcaggaggaaagga
gacagtagagactgtttgtttggatataatgatcattcctggagtctgagctgctctgat
agttatggttactctgtcaggcacaacaacagagaaactcatctctcctcctctgtctct
aacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcc
tctgactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcct
ggatttgggttctggaggaccagttctggttcctcagtgtttctgtgttga
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