Xiphophorus couchianus (Monterrey platyfish): 114149772
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Entry
114149772 CDS
T05908
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114149772 (vldlr)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114149772 (vldlr)
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
114149772
NCBI-ProteinID:
XP_027881660
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Position
8:complement(5582679..5600734)
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AA seq
861 aa
AA seq
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MVTSAPRILLLLLLMWLHHCGTVHGTKTECEANQFQCGNGRCIPAVWQCDGDEDCTDGSD
ENSCVQKTCADVDFVCRSGQCIPKRWHCDGEPDCEDGSDESVEICHMRTCRLNEFSCGPG
TTLCIPIFWKCDGEKDCDKGEDEVNCGNVTCALNEFTCASGRCISKNFVCNGEDDCGDGS
DEVGCAPSSCAPSEFQCGNASCIPASWVCDDDVDCQDQSDEAPTRCGRHPTPPAKCLPSE
MQCGSGECIHKKWRCDGDPDCKDGSDEANCPVRSCGPDQFKCDDGSCILGSRQCNGIRDC
ADGSDEINCKNLTQCNGPEKFKCRSGECIEMSKVCNKIRDCPDWSDEPIKECNVNECLLN
NGGCSHICKDTVIGFECDCTPGLQLIDHKTCGDINECMNPGICSQICVNLKGGYKCECHN
GYQMDPATGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNAAALDADFNQQTI
FWADLGQRTIYSTVLDKRGDVGVHKKVIDNVQTPLGIAVDWIYKNLYWSDLGTKTISVAN
FNGTKRKVLFNTGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGADRQVLVATDIQW
PNGITLDLIKGRLYWVDSKLHMLSSVDLNGDNRNKVLQSADYLAHPFALTVFEDRVFWTD
GENKAIYGANKFSGSDVITLASNLNDPQDVIVYHELIQLAGTNWCTEKSENGGCSFMCLP
APQINKHSPKYSCVCPAGQELAADGHRCRPVTDSSSEDGSEALTQPKEANVSTSIQVDST
ARGSAAAWAILPVLLLAMAGAGAYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDITRH
GANVGHTYPAISIVSTDDDLS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccgcacctcggatcctcctcctcctgctgctaatgtggctccatcactgc
ggtaccgtccacggtacgaagactgaatgtgaagccaaccagttccagtgtggaaacggc
cgctgcatcccggccgtgtggcaatgtgacggcgacgaggactgcacggacggcagcgac
gagaactcctgtgttcagaagacgtgtgcggatgtggactttgtgtgccgcagcggtcag
tgcatcccaaagcgctggcactgcgacggcgagccggactgtgaggacggatccgacgag
agcgtagaaatctgccacatgcggacatgccgtcttaacgagttcagctgcggcccagga
accacgctttgcatccccatcttctggaaatgtgacggcgagaaagactgcgacaaagga
gaggacgaagtcaactgtggtaacgtcacctgcgctctgaacgagttcacctgcgccagc
ggccgctgcatctccaagaactttgtgtgcaacggcgaggacgactgcggcgacggttcg
gacgaggtgggctgcgcgccgtcgtcctgcgctcccagtgagttccagtgtgggaacgcg
tcctgcatcccggccagctgggtgtgtgacgacgacgtcgactgtcaggaccagtcagat
gaagctccgactcgttgcggccgccacccgacgccgcccgccaagtgtttgcccagcgag
atgcagtgcggctctggagaatgcatccataagaagtggagatgtgacggagaccccgac
tgcaaggacggcagcgacgaggctaactgtcctgtgaggagttgtgggccggatcagttc
aaatgtgacgatggaagctgcatcctgggaagcagacagtgtaacggcatcagagactgc
gccgacggatcagacgaaatcaactgcaagaacttgactcagtgtaacgggccagagaag
ttcaagtgtcgcagcggagaatgcatcgaaatgagcaaagtgtgcaacaagatcagagac
tgtccagactggagcgacgagcccatcaaagagtgcaatgtgaacgagtgtctcctgaac
aacggcggttgctcccacatctgcaaagacacggtgatcggctttgaatgcgactgcaca
cctggactgcagctcatcgaccacaagacctgtggagacatcaatgagtgcatgaatcct
ggtatttgcagtcagatctgtgtcaacctgaagggaggctataagtgtgaatgccacaac
ggctaccagatggatccggctactggtgtctgcaaggctgttggtaaggagccatgcctg
atcttcaccaatcgacgtgatattcgccgtctgggtctggagaggaaggagtacacacag
attgtggagcagcagagaaatgcagcagctctggatgcagacttcaaccagcagaccatc
ttctgggccgacctgggacagagaaccatatacagcaccgtcctggacaagcgaggagac
gttggtgtccataagaaggtgatcgacaacgtccagactcctctggggatcgccgtcgac
tggatctataagaacctgtactggtccgatctgggaaccaaaaccatttctgtggcaaac
ttcaacggaaccaaacggaaagttctgttcaacacgggcctgaaagaacccgcctccatc
gctgtggatccgttatctgggtttctgtactggtctgactggggagagccggctaagatc
gagaagtctggtatgaacggagcggaccggcaggttctggtggcgactgacatccagtgg
ccaaacgggatcacactggatctgatcaaaggccggctgtactgggtcgactctaagctg
cacatgctcagtagcgtcgacctgaacggagacaacaggaacaaggtgctgcagtctgca
gactacctggctcatccgttcgctctcactgtgttcgaggatcgggtcttctggacagac
ggtgaaaacaaagccatctacggcgccaacaagttctctggttctgatgtcatcacgctc
gccagcaacctgaacgaccctcaggacgtcatcgtctaccatgaactgatccagctggct
ggtaccaactggtgcacagagaaaagtgaaaatggcggctgcagcttcatgtgtcttcct
gctccacagatcaacaaacattcccccaagtacagctgtgtgtgtcctgcaggccaggag
ctggcagccgacggccatcgctgcagacctgtgacagactcttcctcagaggacggtagt
gaagctctaacgcagcccaaagaagccaatgtgagcacatctatccaggtggactccaca
gccagaggctctgctgctgcctgggccatcctgcctgtcttgctgctggccatggccgga
gcaggcgcctacctgatgtggaggaactggcagctgaagaaccagaagagcatgaacttt
gacaacccagtctacctgaaaaccacagaagaagacctcaacatcgacatcacccgccac
ggcgccaacgtgggccacacctacccagcgatttcaatagtgagcacagacgatgattta
tcctga
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