Xiphophorus couchianus (Monterrey platyfish): 114149778
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Entry
114149778 CDS
T05908
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114149778 (pum3)
03009 Ribosome biogenesis [BR:
xco03009
]
114149778 (pum3)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114149778 (pum3)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114149778 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Motif
Other DBs
NCBI-GeneID:
114149778
NCBI-ProteinID:
XP_027881672
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Position
8:5435373..5443708
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AA seq
637 aa
AA seq
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MAAKPQKPFSSQPGRKPSFKGKGKGEDLAGTKFGGKPGAKKPFKPYKNTEKKSRPGKPND
GRKPGFSKAEKRKRPAGGGGPPAKREKNGKKPPTTEEELKKRLQKKRELKNNRQQAERKE
MFDIISRCKAVWGNLRRKKCDTEQKAKLMKELHGLIRGKIKQMAFAHDSVRVLQCFIQFG
NQKQRFEVFEELKDSVLDMSKSPYGKHVVKKLLMYGNKEMVAAIIQLFGGHIRKMLRHAT
ASTIVEYAYNDKAMLAQRLMITGELYGNTYAICKSSELNTIEKVLAANPEKLENILEETK
QAIVPLAQKEQVIRHSVVHKVFLDFFQFAPEKQRSEMIESIRESVVYMAHTHDGARVAMH
CLWHGTAKDRKVIIKTMKTYMVKFARGEFGHMVLLAIFDCVDDTKLVKQTVLAELLSVLP
EVLGNKHGKKVLLYLLRPRDPTHMLPDIVKLLEQGDGNAHSKKDMATRRRELLEAASPAL
LDHLQLNAAAMVTNKAASVTVRDILASACGDLRPAMTAVAQLANQELVQGGVKGQLHLAE
HPAGHLVLKWLIEQDAMLAENGREECFSRILVDTVGTETMKSWVKVNRGAMVLCSLLNSC
DGSVAAEVKAALSAIIPELRRISDHKGAEILLQNLNK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaaccccaaaagccgttctcctcccagcctggacgaaaaccgtcattcaaa
ggaaaaggaaaaggtgaagacttggcggggaccaaattcggagggaaacctggagcgaaa
aaacccttcaagccgtacaagaacacagagaagaagagcagaccaggaaaaccaaacgat
ggcagaaaaccaggtttctctaaagctgagaagaggaaacgaccagcagggggcggcggt
ccgccggcgaagagggagaagaacggcaagaagccaccgaccacagaagaagagctgaag
aagcgactgcagaagaagagggagctgaagaacaaccggcagcaggcggagaggaaggag
atgtttgacatcatcagccgctgcaaagcagtatgggggaatctccggaggaagaaatgt
gacacagagcagaaggcgaagctgatgaaggagcttcatggactgatccgtgggaagata
aagcagatggcgttcgcccacgactcggtccgagtcctccagtgtttcattcagttcggg
aaccagaagcagcgatttgaggtgtttgaggagctgaaagacagcgtcctcgacatgtcc
aagtcgccgtacgggaaacatgtggtgaagaagctgctgatgtacgggaacaaggagatg
gttgccgccatcatccagttgttcggtggtcacattcgcaagatgctccgccacgccacc
gcctccaccattgtcgagtacgcctacaacgacaaggcgatgctcgctcagaggctgatg
atcaccggcgagctgtacgggaacacctacgccatctgcaagtcgtcggagctcaacacc
atcgagaaggtgttggcggcgaacccggagaagctggagaacatcctggaggagaccaag
caggccatcgtgccgctggcgcagaaagaacaggtcatcaggcattctgtggtccataaa
gtctttctggatttcttccagtttgcacctgaaaagcaaagatcggagatgatcgagtcc
atcagggagtctgtggtctacatggctcacactcacgacggcgcccgagtcgccatgcac
tgcctgtggcacggcacagcaaaggacagaaaagtcattataaaaaccatgaagacctac
atggtgaagttcgccaggggggagtttggtcacatggttctcctggcgatattcgactgc
gtggacgacaccaagctggtcaagcagacggttctggcggagctgctgtccgtcctgccg
gaggtcctcggaaacaaacacggtaagaaggttctgctgtacctgctgaggcccagagac
cccacccacatgctgccggacatcgttaagctgctggagcaaggagacggcaacgcacac
agtaaaaaggacatggcgacccggcggcgggagctgctggaggccgcctccccggcgctt
ttggaccatctccaactgaacgctgctgccatggtaacgaacaaggcggccagcgtcacc
gtcagagacatcctggcgtcggcgtgcggcgacctgcggcccgccatgacggccgtggcc
cagctggccaatcaggagctggtgcagggaggagtcaagggccagctccacctggccgaa
cacccagcaggacacctggtgctgaagtggctcatagagcaggacgccatgttggccgag
aacggcagggaggagtgcttcagcaggatcctggtggacacggtgggaacggagaccatg
aagagctgggtcaaggtcaaccggggagccatggtgctctgcagccttctgaacagctgt
gacggatctgtggctgctgaggtgaaggcggcgctctcagccatcatccctgagctccgg
agaatcagcgaccataaaggagccgaaatcctgctgcaaaatctgaacaagtag
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