Xiphophorus couchianus (Monterrey platyfish): 114149791
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Entry
114149791 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114149791
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114149791
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114149791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
114149791
NCBI-ProteinID:
XP_027881702
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All DBs
Position
8:5734604..5739938
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AA seq
428 aa
AA seq
DB search
MNGKKLRCRRCRRAVGDATCLAADCGPVSCCIWHMDVDNLPEWIWISVQQAVWTSGKLNC
FHCGARLGGYSFLNRYRCPCGRDATVHFSRSRVDLDQKPRLLIVPRRRMGRGSAQAQQEG
PALDLVCAGGTPQHGAARDTDVPQLDSSVRRAAEPQAESDHEDRSDAVPWESGAPAGLAS
LASLASSSAAPQETEEAERQQEAVSSSQGPVVLSSLARTRLSKTDQNRLKSRRRKQRRRE
RWLQSQLQEEEEEEPAQSSPARPPACEDVDRDGLTCAVCLDVFFRPRSCLPCAHVFCEPC
LRRLARNRAAHTPCPLCRRLISNTGFHRELDHRAKTLFPKVWATRRQNFQNSLSARWPLP
SSREQTRYLCCHGRSAEAAWRRWHLNPRPFDLGMQGLPQLPFATLIVLFVISFALLLYLA
GFFFTLFT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaagaagctccgctgtaggcgctgccgcagggccgtcggagacgccacgtgt
ttggcagcagactgcggtccggtctcctgctgtatttggcacatggatgttgataatcta
ccggagtggatctggatctcggtccagcaggccgtctggacgtccgggaagctgaactgc
ttccactgcggggctcggctgggcggctacagcttcctgaaccggtaccgctgcccctgc
ggccgcgatgccaccgtccacttcagccgcagccgcgtggatctggaccagaagccccgc
ctcctcatcgtcccgcggcgcaggatgggccgcgggtcggcgcaggcccagcaggagggg
cccgccctggacctggtctgcgccggtgggactcctcagcacggtgccgccagagacacg
gacgtgccgcagctggactcgtctgtcaggagagcggcagaacctcaggctgagtcggat
catgaggatcggagcgacgccgtcccctgggagtctggagctccggcaggattagcatcg
ttagcatcgttagcatcgtcgtctgcagcgcctcaggaaacagaggaagcagagcggcag
caggaagcggtgtcgtcctctcagggccccgtggttctgagctccttggcccggaccaga
ctgagcaaaacggaccagaaccgactgaagagtcggaggaggaagcagaggaggagagag
agatggctgcagagtcagttgcaggaggaagaggaggaggagccggcccagtcgtccccg
gcccgtcctccggcctgtgaggacgtggaccgggacggcctgacctgcgccgtgtgcctg
gacgttttcttccggcctcgcagctgcctgccctgcgctcacgtcttctgtgagccgtgt
ctgcggcgcctggcccggaaccgcgccgcccacacgccctgcccgctctgccgccgcctc
atctccaacaccggcttccacagagagctcgaccaccgggccaagactctgttcccgaag
gtctgggcgacgcgcaggcagaacttccagaactcgctgagcgctcgctggccgctgccc
agctcccgggagcaaacacgctacttatgctgtcatgggcgaagcgcggaggccgcgtgg
cgacgctggcatctaaatccacgaccttttgacctcggcatgcagggccttcctcagctg
cccttcgccacgctcatcgtcctcttcgtcatctccttcgcgctgctcctctacctcgcc
gggttcttcttcacgttattcacatga
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