Xiphophorus couchianus (Monterrey platyfish): 114149922
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Entry
114149922 CDS
T05908
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03272
Virion - Hepatitis viruses
xco04514
Cell adhesion molecules
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
114149922
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114149922
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114149922
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114149922
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114149922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Swi5
Snapin_Pallidin
SUR7
Motif
Other DBs
NCBI-GeneID:
114149922
NCBI-ProteinID:
XP_027881843
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Position
8:complement(25815707..25826311)
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AA seq
502 aa
AA seq
DB search
MSSKPNGSPPPYEEDHRYNGPVQPAYSYFPDDEFQHFYRWSSPPGILKIMAIIVLVLCVA
IFACVASTLAYDSQGAMSGFGGMYGGSYGGGYGGTYGGGYGGSSYYGAGNGYGYGSIAGN
YNDPRSGKGFMIVMAAFAFIFSLVVFIVIVSHQSLCQSRKFYLAVLIVSAILALLMLIAT
VVYLVAVNPASQASTAYGSQIAALCAPYQQQQMSGVLQNQYLYHYCVVEPQEAIAVVFGF
MVTAALIIMLVFALKTRQKINNYGKQNILWKKVKVVDDLAPPEDIEAWVNNVSAAPEDVP
AADYPEYSDYSEKRRGSRSHLDDDESNYDKPPISYTPQPVVDRPLQNGAPYSSSSSEVAS
STGRPKKRRAGRPRRVDGQDYDTDYNSSGDELDDNDFDSEFPPIANEQERNRYKQEFDRD
HLEYKDLQAELDVLNKDLSNLDKELDELEEGSPQFLDTLDEYNKLKRIKKSADYQVKKRR
CKYLKHKLNHIKKMVSDYDRRT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaaacccaatgggagcccccctccctatgaagaggatcatagatataatgga
cctgttcagccagcctactcttacttccctgacgatgagttccagcacttctaccgctgg
tcctcgcctccaggaatcctcaaaatcatggccatcattgtccttgtgctgtgtgtggcc
atctttgcctgcgttgcctcaacgctggcgtatgacagtcagggagccatgtccggcttt
gggggaatgtacggaggaagttatggaggaggttatggaggaacttatggaggaggttat
ggaggatcgagctactatggagctgggaacggttatggctacggttcaattgcgggaaac
tacaatgacccgcggtccgggaaagggtttatgatcgtaatggccgcctttgccttcatc
ttctccctggtcgtctttatcgtcatcgtgtctcatcagagcctgtgtcagagcaggaag
ttctacctggccgtgttgatcgtcagcgccatcctggcactgttgatgctcattgccact
gtagtgtacttggtggcagtaaaccccgcatcccaggcctcgacagcttacggcagccag
attgcagctctgtgtgctccatatcaacagcaacagatgtcaggagtgcttcagaaccag
tacctttaccactactgcgtggtggaaccacaagaggccatcgccgttgtgttcggcttc
atggtgaccgcagctttgatcatcatgctcgtcttcgccctcaagacgcggcagaagatc
aacaactatggaaaacagaacatcttgtggaagaaagtcaaagttgtggatgatcttgca
cctcctgaggacatcgaggcgtgggtgaacaacgtgtctgctgctcctgaagacgtccca
gctgcagactacccagagtactccgactactccgagaagcggagaggctccaggagtcac
ctggatgatgatgagagcaactacgacaaaccccccatcagctacaccccgcaacctgtg
gttgacaggcccttgcagaacggggccccttacagcagcagcagctcggaggtcgcgagc
tcaacggggcggcccaagaagaggcgcgcaggacggccgcgccgcgtcgacgggcaggac
tacgacacggactataactcgtctggggacgagctggacgacaacgacttcgacagcgag
ttcccgcccatagcaaacgagcaggagcgcaaccgctacaagcaggagtttgaccgcgac
cacctggagtacaaagacctgcaggcggagctggacgtcctcaacaaggacctgtccaat
ctggacaaagagctggacgagctggaggagggaagcccacagttcctggacactctggat
gagtacaacaagctgaagagaatcaagaagtctgcagattaccaggtgaagaagcgcagg
tgcaaatatctgaagcacaaactgaaccacatcaagaagatggtcagtgattatgaccgc
aggacctga
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