Xiphophorus couchianus (Monterrey platyfish): 114150001
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Entry
114150001 CDS
T05908
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114150001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114150001
Membrane trafficking [BR:
xco04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
114150001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
114150001
NCBI-ProteinID:
XP_027881953
LinkDB
All DBs
Position
8:complement(14436942..14452693)
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AA seq
1216 aa
AA seq
DB search
MSLADQQWSPTSVQVTVLQARGLRIKGKSGTNDAYAVMQVGKEKYQTSVVEKSVAPAWKE
EASFDLPPLLLQAGGGGGKDRSTLHVQVLHRALVGPDKLLGQAVINLLQLSEDKTRNKTE
WFKLLDKTGKPDKDRGEVLLDVQFMRNNMTASMFDLSAAGKSRSRLGKLKDKVRGKKKEQ
DSSSGVVPSPTQVLTDSEEEDASGGGEGGKSKQNKRMSLFSPKSNLQKNLSQSMSVLPAK
NSSLSGSQSSGLNVDPSEGKKKFKFKIHKHSSSSDSKDSSSAQQKQEQSNLCINGSHVYC
EEPPPRTARAGSSFSLSSSGHGSMEDVPENPSPSVDSLKAVREYSPWMEEEEEEKEEEDE
NINDLRKEEEEKVKLEKDMREEEEEAIRKQQKELERLAEETFRREEEEKVRKEEEERQKL
AEEKRRVEEQEKRHREEEKRIKEEERAQERRRQEEEHKLAEEKRRLKEEEERRIEEEKVR
REQERAEEERRKTEQEKKRREEEEMLRKEKMRIEEEKEKVRREKEEARLMEEKRREEERI
EAEEKFRKEEEERIKMEEEMRRKEREEKLAKRKELEEQERRAREEQEKMQREEEERRKQE
EKLAKEKLRQEEERRKAKEERARREEEDRIQKEKIRREEEERKKKEEEEECKIRQEELEK
LAIEKMRKEEEERRKAEEERAKREEEQQIQKEKIRREEEEKAEKQRLEDEMRQAKRKEEE
RMKEEQAKMLKEEKRKRAEDERIKAEKQREEELEKMRVEEERIRREERNEKERREEEIRK
QEKLAKEKKENKIKEEEKSVGTKIKMGVPVEIISTNPFDENFTLPEETPKLSKAKSDDQR
SQSAASSVESGAASTSEKDPTNIQREKRAAPKPPGRNQLERQKQKEEEMSTQHLPQINKQ
SKDKDVKTVSVAPQRSVQMIAPLNRSSKDLRNTQSTTEHDSAQEETGKHNKRPAPSIPCT
AEDELHRGVVEIKDGAVYGLNPFEDDDEEENELTVHNDATTFVTTNPAVWPPVKSQAADK
DSAKVKSSKIARAPLPPDPNDTPSSAIVNRNHGETDLLDDIGETAPNKACNTQQEVKSHV
QVQENPNKESKKIVTMAGAREEGPPAVSRRLQPVKPLNPLEQPSDSVGKVGNDNKATELD
CNGVQDKTNVGTRRSGPYSQLTREELIALLLKQESQLSERDKKISELEQYIDNLLVRVME
ENPSILMSMSSLKKSA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcggatcagcagtggagtcccacaagcgtccaggtaacggtgctccaagcc
agaggcctcaggataaaggggaaaagcggcaccaatgacgcgtacgcggttatgcaagtg
ggcaaggagaagtaccagacgtcggtggtggaaaaaagcgtggctccggcgtggaaagag
gaagcctcctttgacctgccaccgctgctgcttcaggctggaggaggtggagggaaggac
cgcagcacgctgcacgtccaggtcctgcaccgcgctctggtgggacctgacaagctgctg
ggtcaggctgtcatcaacctgctgcagctcagtgaggacaaaacccgcaacaagacagag
tggtttaaattgctggataaaaccggtaagccggacaaagaccgtggagaggtccttctg
gacgtccagtttatgagaaacaacatgaccgccagcatgttcgacctctccgctgcaggg
aagtcccgctcccggctgggaaagcttaaggataaagtccgtggaaagaaaaaggagcaa
gactcctcatcaggtgtggtgccttcgcccactcaggttctgacagacagcgaagaagag
gacgctagtggaggtggagagggaggaaagtcgaagcaaaacaaaaggatgtctttgttt
tctcctaaatccaacctgcagaagaatttgtctcagtccatgtccgtcctgcctgcgaag
aactcctcgctgagcgggagccaatcatctgggctgaacgtggacccctctgagggcaaa
aagaagttcaagttcaagatacacaagcactccagcagctctgacagcaaagattcatcc
tctgcccaacaaaaacaggagcaaagtaatttgtgcatcaacggcagccatgtttactgc
gaggagccgccgcctcggacggctcgcgccggatccagcttcagcctgtcaagttcagga
cacggatcaatggaggatgtcccggaaaacccgtctccatctgtggattcacttaaagca
gtgagggagtattcaccctggatggaagaagaggaggaagagaaagaggaggaagatgaa
aatattaacgatttaagaaaagaggaagaagaaaaggtcaagttggaaaaggatatgagg
gaagaggaagaggaggccatcagaaaacaacaaaaggagctggagaggttggctgaagaa
acgtttagacgagaagaggaggaaaaggtcaggaaagaggaggaagagcgacaaaaactg
gcagaagaaaaaaggagagtagaggaacaagaaaagaggcacagagaagaagaaaaaaga
atcaaggaagaggaaagggcacaagagaggaggaggcaggaagaggagcataaattagct
gaagaaaaaaggagactgaaggaggaagaagaaaggaggattgaagaagagaaagtcaga
agggaacaagagagagctgaagaggagagaaggaaaacggagcaagaaaagaagcggagg
gaggaagaagagatgttaaggaaggaaaagatgagaatagaggaagaaaaagagaaggtt
cgtcgagaaaaggaggaagctaggctaatggaagaaaagagaagagaggaagaaaggatt
gaggctgaagagaagttcagaaaagaggaagaggaaaggattaagatggaagaagagatg
agaaggaaagaacgcgaagaaaagttagcaaagaggaaagaactggaggaacaggaaagg
agagcaagagaagagcaagaaaagatgcaaagggaggaagaggagcggaggaaacaagag
gagaagttggctaaagaaaagctgagacaagaagaggaaagaagaaaggccaaagaagag
cgtgcaagaagggaggaggaggataggattcagaaagagaaaatcagaagagaggaggaa
gagaggaagaaaaaagaggaggaagaggagtgtaaaattaggcaagaagaactggagaag
ctggctatagaaaagatgagaaaagaggaagaggagagaagaaaggctgaagaagagcga
gcgaaaagagaggaagaacaacagatccagaaagagaaaataagaagagaggaagaggag
aaggccgagaaacaaaggttggaagatgaaatgagacaagcaaaaagaaaagaagaagag
agaatgaaagaagagcaagcaaaaatgctaaaggaggaaaaaagaaaaagagcagaagac
gagagaataaaagcggagaaacaaagagaagaggaactggagaaaatgagggttgaagag
gagagaataaggagggaggagaggaatgagaaggaaagaagggaagaggaaataaggaag
caggaaaagttggcaaaagaaaagaaggaaaacaaaataaaagaagaagagaaaagtgtt
ggaacaaaaatcaaaatgggagttcctgtagaaatcatttccactaatccttttgatgaa
aacttcactctgcctgaggaaactcccaaattgtctaaagcaaaatctgatgatcaaaga
agtcagtcagctgcgtcatcagtggaaagcggggcagcttccaccagcgaaaaggaccca
actaacattcagcgggaaaagagagcggctcccaagcctccgggaaggaatcagttggag
agacagaaacagaaggaggaggagatgtcgacacaacatctgccacaaattaacaagcag
agtaaagacaaagatgtcaaaactgtcagcgttgctccccagcgctcagtgcagatgatc
gctcctctaaacaggtcttccaaagatttgagaaacacccagagcacgacggaacatgat
tctgcccaagaagaaacaggcaaacacaataaacgtcctgctccatccataccgtgcact
gctgaagatgagcttcacagaggcgtggtggagattaaagacggagctgtttatggttta
aacccatttgaagatgatgatgaggaggaaaatgagctcacggttcataatgatgcaaca
acctttgttacaactaatccagcagtttggcctcctgtcaaatcacaagctgctgacaaa
gattctgctaaagtcaaatcctcaaaaatagctcgagctcccctaccgcctgatcccaat
gacactccttcaagcgccattgtcaatcgaaaccatggcgaaactgatcttttagatgac
attggagaaactgctccaaacaaggcatgcaacacacaacaagaggtcaaaagtcacgta
caggtccaagagaatccaaacaaagagtccaagaagattgtgaccatggctggtgcaaga
gaggagggacctcctgcagtttcacgcagacttcagcctgtaaaaccccttaatcctctg
gagcagccgtctgactcagttggtaaagttggaaatgataacaaagccacagaattagac
tgtaatggagttcaggacaaaacaaacgttggcacaaggagatcagggccatactcccag
ctaactcgagaggaactgatcgctctgttgttgaaacaggagagccagctctccgagaga
gataaaaagatatcagagctggagcagtacattgacaacttactggtgcgagtcatggaa
gagaatccaagtatcctcatgtccatgagctctttaaagaagtctgcctaa
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