Xiphophorus couchianus (Monterrey platyfish): 114150027
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Entry
114150027 CDS
T05908
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114150027 (kcmf1)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114150027 (kcmf1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114150027 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
TFIIA
zf-C2H2
DUF6244
Zn_SUZ12
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
114150027
NCBI-ProteinID:
XP_027882001
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All DBs
Position
8:19479495..19489771
Genome browser
AA seq
389 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLYYGGDTFSVEQPQSFTCPYCGKMGFTETSLQEHVTSEHSETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGIGGPRARRTNMHFTSGSTGG
LSSSSSQSSTYTPSNRETMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQLE
RQQAQAARQQVEAGRHATRRGNNPNNTGNSIPPPNSSTANTSAVGDSNPASSSQSSQFLL
ARLNEPKMSEAERQFLEGERADRSLFVQELLLSTLMHEESSSSDEDERRDFADFGAMGCV
DIMPLDVALENLQLRESSSSGREPPPPPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgatgcatgtttaaagggcaactttagaggaagg
aggtttaagtgtctaatttgctacgactacgacctgtgtgcatcgtgctacgagagcggg
gccaccacaacacgacacaccacagagcatcccatgcagtgtatattaaccagagtagac
tatgatttgtattatggaggagacactttttcggtggaacaacctcagtcgttcacatgt
ccttattgtggtaagatgggcttcacggagacgtccttacaggagcatgtcacctcagag
cattcggagacgtccacagaggtgatctgtccaatctgcgctgccttgccaggaggcgat
ccaaaccatgtgacggacgactttacggctcacctcaccctggagcacagagcgccaaga
gatttagacgagtccagtagtgttcggcacgtacgcaggatgttccacccagggcgagga
ataggcggccccagagctcgacggacaaatatgcactttactagcggctccacggggggg
ctctcatcctcctcatcacagagctccacttacacccccagtaacagagagacaatggac
ccaatcgcagagttgttgtctcagctgtccggtgtgcggagggctgcggggggccagata
aactcgtcgggcccctcggcctcccagctgcagcagctccagatgcagctgcagctggag
cggcagcaggcgcaggcagcccggcagcaggtagaggcgggccgccacgcaactcgacgt
ggcaataaccccaacaacacgggcaactctatccctccgcctaactcgtccactgccaac
accagcgccgtgggtgatagcaatcctgcttcctcctcccaaagctcccagtttctatta
gcacgcttgaatgaacccaagatgtcggaagcggagcgccagttcctagaaggcgagcga
gccgaccgcagcttgttcgtccaggagctgctgctgtcgacgctgatgcacgaggagagc
tcctcctccgacgaggacgagcgccgagacttcgctgacttcggagccatgggctgcgtg
gacatcatgcctttagatgtggcgctggagaacctccagctccgagagagcagctcttcg
gggagggagcctccgccgcctcctctttga
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