Xiphophorus couchianus (Monterrey platyfish): 114150054
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Entry
114150054 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114150054
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114150054
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114150054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Baculo_IE-1
DpnI_C
DUF4599
Motif
Other DBs
NCBI-GeneID:
114150054
NCBI-ProteinID:
XP_027882042
LinkDB
All DBs
Position
8:10652194..10658391
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AA seq
268 aa
AA seq
DB search
MEDGQGGDLDYLIQDEDTIIEGVSNQVLFVVVVSFTFLAGIFTLLCRQEEQNIHPENQEH
VRAVRQQLQTEQDENPQAEARQQYYTDMSCPVCLQQAVLPVETNCGHLFCGSCLIAYWRY
GTWLGVINCPICRQMVTLLFPLFHEHAAPQRVQDGEAEPQLILRDINDYNRRFSGQPRSL
MDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGAITYLASPLDILPEALFGLLGF
MDDFFVILLLFVYISIMYREVVTQRLNG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggtcaaggtggggacttggactacctgatccaagatgaggacaccatcatt
gagggtgttagcaaccaggttttgtttgtagtggttgtcagtttcaccttccttgcaggc
atctttactttgctctgcagacaggaagagcagaatatccatcctgaaaatcaggagcac
gttcgagctgtccgacagcagcttcaaactgagcaggatgaaaatccgcaggcagaggct
agacagcagtattacacagacatgtcttgccctgtgtgtttacaacaggctgtgctgcct
gtggagaccaactgtggacaccttttctgtggctcctgccttatagcttattggaggtac
ggcacctggctgggtgtgatcaactgcccaatctgcagacaaatggtaacacttctgttc
ccattatttcatgagcacgctgctcctcagagggttcaggatggcgaggccgaacctcag
cttatattacgagacatcaacgattacaaccgaagattttctggtcagccaagatctctt
atggacaggctgcgggacgtccccaccctgctccgtcatgccttcagggagatgttttct
gtgggcggactcttctggatgttccggattcgaattcttctctgtctcgtcggtgccatc
acctacctggcctcgccactcgacattctcccggaagctcttttcggccttctgggcttc
atggacgacttctttgtgatcctcctcctgtttgtgtacatctctatcatgtacagagaa
gtggttacgcagaggcttaatggctag
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