Xiphophorus couchianus (Monterrey platyfish): 114150172
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Entry
114150172 CDS
T05908
Name
(RefSeq) protein turtle homolog A-like isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114150172
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
IGSF9
114150172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_DSCAM-DSCAML_C
Ig_4
C2-set_2
Motif
Other DBs
NCBI-GeneID:
114150172
NCBI-ProteinID:
XP_027882255
LinkDB
All DBs
Position
8:8013921..8074573
Genome browser
AA seq
1540 aa
AA seq
DB search
MGSGRSYWQTFAAVVLICHFLTTDGGKSEVRGKVGGWVDLECSFSPAGRRSGLSATQHVV
EWVRQGVDIPVLMKFGSYTPRVHPGFEGRASLLSSATLRLERLQLDDQGPYSCRIFQLDK
LEEEMQSSNWTLLSVTAPPTFTKAPPPVVQALVGSRLSLDCVAIGNPTPTITWLKDGSAV
PSANIQGGALSLPAVTAQAAGLYACHASNAEGNASRVAKLEIKGPPVIIVPPKDTTLNMS
QNALLQCQAVADPPNMTYVWQKAGENVHHIESLKSRVRILVDGTLQIFRLLPEDSGNFSC
VPTNGLLTPPTASAILTVMHPAKAFQLPEETYLPTGMGGGIRCPVAAQPLLLRVDWIKDG
APLDLSLYPGWTLKADGSLVMATVNEDAAGTYSCTPYNSYGTMGPSGPTRVVLQDPPSFS
ITPAQEYRQDAGRTLLIPCQGNAAATATWSKVDPVRSVSYSIEPNGSLLLQPLLKDHQGE
WECRVSNRAASIETRTRVFVLGTSPHAAAALSVSPGPSRANLSWEAGFDGGSAQTFSVWV
KRISVSDGDGRQDWYSVPVPPSSGTSLQVSGLFPATDYQFSVLSQNKFGTGPFSEIATTR
TLDPPERSIKPKPPASLSANQNSAGVILQWALPDAQQPPITGFVLQSRSTAAAAAEDWFN
LEENINASSSHILVRGLQKGRVYELRMLSRRGELLSEPGPSVNVSTTVTESFAATSTFVP
ESLLAGVLAGIGFMFLALVLLLGSACFVSRRRDRRRRKTENEPLPAIYKCPPSIKTSGSS
SPDSLLKKSLLPASSHYPTTSSTTSSSQTDCSTLSTENNRRRRTLEPTYSRGRLTKTTSL
ISPSIELISRGPDGRFAAGDYDTISVNSKTISRVKRSVSLHLEKEDKKDLPCVLSVDVPP
FKLEGDSSQMHSLGQLLPLQESYIVSPDQNSLYSNTSFCTMPCLNRGLPSVFPVLPHLRA
SIGQPSTTASTLVLQMEHEREKGNLSRCLRLAQEREEMERELRWYTLDRNSMNVKTEERE
TSNGDKSVESLMWEYKSKTLPNIYRQGCKERSKYLTSSATNWEAHPYDSSSTLNPFRDHL
NTSPPFTPSFSPIFLESFTKKPNGVRHSFVDSSTLPHQRCRVDPPQGYDSLRRFSSFDHQ
TSDSFHKPQKENILSNGTMFHSNRNTPDTVPDSTRLDKMLSEPIGSVGKESCVEMSVDEP
EFELPTLEPAKPMLHHRIASHVQHGCSLSQRSRHEDMRRSTSFNCSRNASVGSFDMAHLG
QQTSGPEHWRARTRGSKTLDRSQRSQSLDLRRQKKSTFLTPSAWVESLSQEDCSVEFSHT
STKSEQHFSTAVGPNRSRKPDVPYYCEPSPLADTANHPTPNQDTMKESGYSVSLKEVSTY
LPPISNDLEALEVDSGGYEGVADSGGSYSSYASSGRGSMETTNGHLPLSHLSPTLTVSPA
TAEDTQGGSEDKEGGQIEPKRRRQPSVDENYEWDAGDICLRPGKEDGVLPTPNPQKPAAN
RSRPSMPRSEKAQKRSSAFASLPGDQSRRSAVPEPDAVMF
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaggaagatcatactggcagactttcgctgcagttgtactcatttgccacttt
ttgaccactgatggtgggaagtcagaggtccgtggaaaggttggaggctgggtggatctg
gagtgcagtttttcaccagcagggcggcggtctgggttatctgcaacccaacatgtggtg
gaatgggtgcggcaaggcgttgacattcctgtcctgatgaaatttggatcctacacaccc
cgagtccatccagggtttgaagggcgggcgtctctgctcagcagcgccaccctaaggctg
gagcgcctgcagctggacgaccagggtccctacagctgccgcatatttcagctggacaaa
ctggaagaggaaatgcagagcagcaactggactctgctttctgtgactgccccgcccact
ttcaccaaagccccgccccctgtcgtccaggccctggtgggaagtcgcctgtctcttgac
tgcgttgctattggcaaccctacgccaaccatcacctggctaaaagacggcagcgccgtt
cccagtgcaaacattcagggaggagcgttgtctctgccggcggtgaccgcgcaggcagcc
gggctctacgcctgccacgcctccaacgccgagggaaacgcgagccgcgtggcgaagctg
gagatcaaaggtccgcctgtcatcatcgttcctcctaaagacacaaccctcaacatgtcc
cagaatgcactgctgcagtgccaggcggtggccgaccctcccaacatgacgtacgtgtgg
cagaaagccggagaaaacgtccatcatatcgagtctctgaagtcgcgcgtgaggatcctg
gttgatggaacgctgcagatcttccgtttactgccagaagactccgggaacttcagctgt
gtaccgaccaatgggctgctgaccccgcccaccgcctccgccatcttaactgtgatgcac
ccagccaaggctttccaactacccgaggaaacgtaccttcccacaggtatgggcggcggg
atccgatgcccggtggcagctcagcctctgctgctccgtgtggattggataaaagacgga
gcgcctctggatctgtctctgtatccaggatggactctgaaagccgacggctctttggtc
atggcgacggtcaacgaagacgcagcgggcacctacagctgtactccatacaacagctac
ggcaccatggggccatctggacccaccagggtggttctgcaggaccccccgtcattcagc
atcactccagcccaggaatacaggcaggacgccgggaggacgctgctcatcccctgtcaa
ggaaacgcagccgcaacagccacctggagcaaggttgacccggttcgttctgtttcctac
tccatcgaacccaatgggtctttgctgctgcagcctcttctgaaggaccaccagggggag
tgggagtgccgcgtctccaaccgcgctgcgtccatagagacccgcacacgagtctttgtc
ctgggaaccagtccccatgcggccgccgcgctgtccgtctctcctgggccgagccgggcc
aacctatcctgggaggccggcttcgacggaggatcagcgcagacattttcagtctgggtg
aagaggatttcagtgagcgatggcgacgggaggcaggactggtactccgtacccgttccc
ccctcatccggcaccagcctgcaggtttcgggcctttttcccgccaccgactaccagttc
agcgtcttgtctcagaataagtttggcacagggcctttcagcgagatcgcaactacacgc
actttggatcctccagagaggagcatcaaaccgaagccccccgcttcgctgtcagctaat
cagaactcagcaggtgtcatcctgcagtgggctctccctgacgcccagcagccgcccatc
acaggctttgtcctccaatcccgctccaccgccgccgccgcagcagaggactggtttaat
ctggaggagaacatcaacgccagcagcagccacatcctggttaggggtctgcagaagggc
cgtgtgtatgagctgcggatgctttctcgtcggggggagctgctgagcgagcccggtcca
tcagtcaacgtctccaccacagtgacggagagcttcgcagctacgtccacgtttgtcccg
gagtcgttgctggccggtgtgctagccgggatcggcttcatgtttctggcgctggtcttg
ctgctcggttctgcctgcttcgtcagccgcaggagggaccgtcgccgcaggaagacggag
aatgaaccccttcctgccatctataagtgccccccatcaattaagacttcaggctccagt
agtccagacagtttgttgaagaaaagcctgctcccagccagctcccactaccccacaacg
tcttccaccacttcttcatctcagacggactgctccactttgagcacagagaataaccgt
cggcgcaggactctagagccaacctacagcagaggccgccttaccaagacaacttcttta
atttctccctccattgagttgatttctagaggtccggatggccggtttgcagctggtgac
tatgatacaataagtgttaacagcaaaacgatttccagagtcaaaagatctgtgtcactc
cacttggaaaaggaggacaagaaagacctaccatgtgtgctttctgttgacgttcctccg
tttaaactggagggtgattcaagtcaaatgcacagcttgggtcaactcctgccacttcag
gaaagctacattgtttcgcctgatcagaacagcttgtactcaaacaccagtttttgcacc
atgccttgtctcaacagaggactgccttcagtatttcccgtcctcccacatctccgagcc
agcattggtcagccttcaacaacagcgagcactttggttctccaaatggaacatgaacgt
gagaaagggaaccttagtcggtgcctgaggctggcacaggagcgagaagaaatggaaagg
gagcttcgatggtacacactagacagaaactccatgaacgtcaagacagaggaaagagaa
acgagcaatggggacaaaagtgttgagagtcttatgtgggaatacaaaagcaagacctta
ccaaacatctatcgtcaaggttgtaaggagagatctaaataccttacatcatccgcaacc
aactgggaagcccatccttatgactcaagttcaactttgaatccattcagagatcatttg
aatacatctccccctttcactccttctttttctcccatttttcttgaatcatttactaag
aaacccaatggagtccgccactcttttgttgacagctcaactctccctcaccagaggtgt
cgagtagatccaccacaaggctacgatagtctaagacgattctcatcctttgatcaccaa
acaagtgactcattccataagccacaaaaagaaaacattcttagcaatggcacaatgttt
cacagcaacagaaacactccagatacagtaccagactctacaagattggacaaaatgctc
agtgaaccaattggttcagttggaaaagagtcgtgtgtcgagatgagcgtagacgagccg
gagtttgagttgcccacgttggaacctgcgaagcccatgttacaccacaggattgcttct
catgttcaacacggctgctcgctgtctcagcgaagcaggcatgaagacatgagaagaagc
acaagcttcaattgcagcaggaatgcttctgtcggcagctttgacatggcccatctcggt
cagcaaacctcaggaccagaacactggagagctaggacccgaggctccaaaaccttggac
cgcagtcagcgaagtcagagtctagacttgaggagacagaagaagagtacctttctcaca
ccatccgcatgggtagagtcactcagccaagaggactgttcggttgaattttctcataca
agtaccaaaagtgagcaacatttctcaactgctgtgggtccaaatcgcagtcgaaaacct
gacgtgccctactactgcgaacctagccccttagctgacactgccaatcatccaactccc
aatcaggacacaatgaaggaatcgggttattctgtcagcctgaaggaggtttccacatac
ttaccgcccatcagtaacgacttagaggcactggaagtggattcaggaggctacgaggga
gtggcagactccggtggcagctacagcagctatgctagcagcggccgtggcagcatggag
actactaatgggcatctgcccttgtctcacctgtccccaacgctgacagtctcacctgcg
actgcagaggacactcaggggggatcagaggacaaggaaggtggacaaatagaaccaaaa
cgaaggaggcagccttcggtagatgagaattatgaatgggatgctggcgacatctgctta
cggcctggaaaagaagatggcgttctcccaacaccaaacccacagaagcccgctgccaac
cggagtcgtcccagcatgccgcgctccgagaaagcacaaaaacgttcctctgcgttcgcg
tcgctgccgggggatcaaagcaggcgctctgctgtgccagaaccagacgccgtgatgttc
tga
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