Xiphophorus couchianus (Monterrey platyfish): 114150224
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Entry
114150224 CDS
T05908
Symbol
lrrc8a
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114150224 (lrrc8a)
Ion channels [BR:
xco04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
114150224 (lrrc8a)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
114150224
NCBI-ProteinID:
XP_027882353
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Position
8:complement(20202096..20219557)
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AA seq
794 aa
AA seq
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MIPITELRYFADTQPTYRILKPWWDVFTDYISIIMLMIAVFGGTLQVTQDKMICLPCKWI
LNDTCDAMPNATGAYAPVPKGIQYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLLHTLI
FLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPVGKTNGSMDK
KASSVSEDVEASIPMLQRTKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRIHVEE
GDIVYRLYIRQTIIKVIKFILIISYTGYYVSCIKFSVVCSVNMEKLTGYRLFHCAHPLAT
LFKILACFYISLVIVYGLICMYTLCWMVRRSLKRYSFESIREESSYSDIPDLKNDFAFML
HMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFMLS
GIPDTVFDLVELEVLKLELIPDVTIPPIIAQLSNLREMWLYHTPAKIEAPALAFLRENLK
SLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRFIVIDGLRELKSLKVLRLKSNLT
KLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNL
QEIDLKDNNLKTIEEIISFQHLYRLVCLKLWYNQIAYIPIQIGTLTNLERLYLNRNKIEK
IPSQLFFCRKLRFLDLSHNNLTSIHPDIGFLQNLQYFAVTANRIETLPPELFQCKKLRTL
NLGNNCLQTLPSRFGELTGLTQLELRGNRLECLPVELGECRLLKKSGLVVEEDLFNTLPT
EVKEHLWRADKEQV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatcacagagcttcggtactttgctgacacccagccaacataccgcatcctg
aagccatggtgggacgttttcaccgactacatctcaatcatcatgctgatgatcgcggtg
ttcggcgggacgcttcaggtcacgcaggacaagatgatctgcctgccttgcaagtggatc
ctcaacgacacttgcgatgccatgccaaatgcgacaggcgcctacgccccagtgccaaaa
ggcattcaatacgacctggatcgacaccagtacaactatgtcgacgccgtctgctacgag
aacaagctgcactggtttgctaaatatttcccttatctggtgctgctccacactctcatc
ttcctggcctgcagcaacttctggttcaaattcccacgcacgagctccaaactggaacac
tttgtctccatcctcctcaagtgcttcgactcgccgtggacaacgagggctttgtctgaa
accgtggtggaggagagcgaccccaaaccggtggggaaaacgaacggctccatggataag
aaggcgtcgagcgtgagcgaggatgtcgaggccagcattcccatgctccagcgaacaaag
tccaggatcgagcaggggatcgtggatcgctctgaaactggggttttggacaaaaaggaa
ggggagcaggccaaggcgctttttgagaaagtgaagaagttcaggattcacgttgaggaa
ggcgacatagtctaccgtctttacatacgtcagaccatcatcaaagtaatcaagttcata
ctgataattagctacacaggctattatgtaagctgcatcaagttcagcgtggtgtgctca
gtgaacatggagaaactgacagggtaccgtctgtttcattgtgcacatccattggctact
cttttcaagatcttggcctgtttttacattagcctggtaatagtttacggtctcatctgc
atgtacacgctctgctggatggtgagacgctccctcaaacgctactcctttgagtcaatc
cgcgaggagagcagttacagtgacatccccgacctcaagaacgactttgccttcatgcta
cacatgatagatcagtatgaccctttgtactccaagcgctttgctgtgttcctgtcagag
gtcagcgagaacaagctgaggcagctgaacctcaacaacgagtggacgttagagaagctg
aggcagcgaatcaccaagaactcccaggagaaactggagcttcatctcttcatgctcagc
gggatccccgacacggtgttcgatctggtggagctggaggttctgaagctcgagctgatc
ccggacgtgacgataccccccatcattgcccagctctccaacctgagggagatgtggctt
taccacactccagctaaaatcgaagctccagctctggctttcttaagggagaatctcaag
tctctccacatcaagttcacagatatcaaggagatcccactgtggatctacagcctgaag
aacctcagcgagctgcacctgaccggaaacctgagcgccgagaacaatcgcttcattgtg
atcgacgggctccgggagctcaagagcctgaaagtgctgcgtctgaaaagcaacctgacc
aagcttcctcaggtggtgaccgacgtgggcgtgcaccttcaaaagctgtccattaacaac
gagggcaccaagctgatggtgctcaacagcctcaagaagatggtcaacctgacagaactc
gagctcattcgctgtgacctcgagcgcatcccgcactccatcttcagcttgcacaacttg
caggagatcgacctgaaggacaacaacctgaagacgatagaggagatcatcagctttcag
cacctgtaccgcctcgtgtgcctgaagctctggtacaaccagatcgcctacatccccatc
cagatcggaacgctcaccaacctggagaggctctacctgaacaggaacaagatcgagaag
attcccagccagctcttcttctgtcgcaagctgcgcttcttggatctgagccacaacaat
ctgacgagcatccacccagacatcggcttcctccaaaacctgcagtattttgctgtgaca
gcaaacaggattgagactttgcccccagagctgtttcagtgcaagaaactccgcactctg
aatctggggaacaactgcttgcagacgctgccgtcgcgcttcggggaactcaccgggctg
acccagctggagttgaggggcaaccgtcttgagtgcctccctgtggagctcggcgagtgc
cggctgctgaagaagagcggcctggtggtggaggaagacctgttcaacacgctgccgacg
gaggtcaaggagcatctgtggagggctgataaggagcaagtttga
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